RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 TLR2O60603 784 aa17.72■□□□□ 0.43
ATG4B-224ENST00000494132 GLRX3O76003 335 aaKnown RBP17.72■□□□□ 0.43
ATG4B-224ENST00000494132 HMGCS2P54868 508 aa17.72■□□□□ 0.43
ATG4B-224ENST00000494132 TREML2Q5T2D2 321 aa17.72■□□□□ 0.43
ATG4B-224ENST00000494132 ZNF280CQ8ND82 737 aa17.72■□□□□ 0.43
ATG4B-224ENST00000494132 ERO1AQ96HE7 468 aa17.72■□□□□ 0.43
ATG4B-224ENST00000494132 DOCK3Q8IZD9 2030 aa17.72■□□□□ 0.43
ATG4B-224ENST00000494132 ASNSP08243 561 aa17.71■□□□□ 0.43
ATG4B-224ENST00000494132 AAMPQ13685 434 aa17.71■□□□□ 0.43
ATG4B-224ENST00000494132 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.43
ATG4B-224ENST00000494132 OTOP1Q7RTM1 612 aa17.71■□□□□ 0.43
ATG4B-224ENST00000494132 SLC44A5Q8NCS7 719 aa17.71■□□□□ 0.43
ATG4B-224ENST00000494132 DYNLL2Q96FJ2 89 aa17.71■□□□□ 0.43
ATG4B-224ENST00000494132 ARHGAP39Q9C0H5 1083 aa17.71■□□□□ 0.43
ATG4B-224ENST00000494132 EHD4Q9H223 541 aa17.71■□□□□ 0.43
ATG4B-224ENST00000494132 RWDD1Q9H446 243 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-224ENST00000494132 ZCCHC17Q9NP64 241 aaKnown RBP17.71■□□□□ 0.43
ATG4B-224ENST00000494132 SLC4A4Q9Y6R1 1079 aa17.71■□□□□ 0.43
ATG4B-224ENST00000494132 M0R2C6 588 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 RNF113AO15541 343 aaKnown RBP17.7■□□□□ 0.42
ATG4B-224ENST00000494132 GH2P01242 217 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 SHMT1P34896 483 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 MTMR2Q13614 643 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 OSBP2Q969R2 916 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 FSD1Q9BTV5 496 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 AS3MTQ9HBK9 375 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 HPS5Q9UPZ3 1129 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 ADGRA2Q96PE1 1338 aa17.7■□□□□ 0.42
ATG4B-224ENST00000494132 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-224ENST00000494132 TATDN1Q6P1N9 297 aa17.69■□□□□ 0.42
ATG4B-224ENST00000494132 APPBP2Q92624 585 aa17.69■□□□□ 0.42
ATG4B-224ENST00000494132 SEC62Q99442 399 aaKnown RBP17.69■□□□□ 0.42
ATG4B-224ENST00000494132 PARK7Q99497 189 aaKnown RBP17.69■□□□□ 0.42
ATG4B-224ENST00000494132 USP17L12C9JPN9 530 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 USP17L21D6R901 530 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 PDE1AP54750 535 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 GABPAQ06546 454 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 RAB3GAP1Q15042 981 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 FBXO46Q6PJ61 603 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-224ENST00000494132 C17orf99Q6UX52 265 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 STK11IPQ8N1F8 1099 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 EFCC1Q9HA90 598 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 AGTPBP1Q9UPW5 1226 aa17.68■□□□□ 0.42
ATG4B-224ENST00000494132 MPHOSPH10O00566 681 aaKnown RBP17.67■□□□□ 0.42
ATG4B-224ENST00000494132 GPAA1O43292 621 aa17.67■□□□□ 0.42
ATG4B-224ENST00000494132 CTGFP29279 349 aa17.67■□□□□ 0.42
ATG4B-224ENST00000494132 BACE1P56817 501 aa17.67■□□□□ 0.42
ATG4B-224ENST00000494132 ZYXQ15942 572 aaKnown RBP17.67■□□□□ 0.42
ATG4B-224ENST00000494132 ABCB5Q2M3G0 1257 aa17.67■□□□□ 0.42
ATG4B-224ENST00000494132 STRBPQ96SI9 672 aaKnown RBP17.67■□□□□ 0.42
ATG4B-224ENST00000494132 ATP8A2Q9NTI2 1148 aa17.67■□□□□ 0.42
ATG4B-224ENST00000494132 LACTBP83111 547 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-224ENST00000494132 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
ATG4B-224ENST00000494132 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-224ENST00000494132 SMCR8Q8TEV9 937 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-224ENST00000494132 WDR18Q9BV38 432 aa17.66■□□□□ 0.42
ATG4B-224ENST00000494132 TBC1D2Q9BYX2 928 aa17.66■□□□□ 0.42
ATG4B-224ENST00000494132 STAP2Q9UGK3 403 aa17.66■□□□□ 0.42
ATG4B-224ENST00000494132 GSG1L2A8MUP6 293 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 USP17L10C9JJH3 530 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 ZFYP08048 801 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-224ENST00000494132 BCRP11274 1271 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 GUCY1A2P33402 732 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 SOX10P56693 466 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 SEPT2Q15019 361 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 SH3D19Q5HYK7 790 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 CTR9Q6PD62 1173 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 CCDC129Q6ZRS4 1044 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 CHD1LQ86WJ1 897 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 CLEC10AQ8IUN9 316 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 DDRGK1Q96HY6 314 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 EPB41L4AQ9HCS5 686 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-224ENST00000494132 CABP5Q9NP86 173 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 TMOD4Q9NZQ9 345 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 PTPN22Q9Y2R2 807 aa17.65■□□□□ 0.42
ATG4B-224ENST00000494132 NUCB1Q02818 461 aa17.64■□□□□ 0.41
ATG4B-224ENST00000494132 AMOTL1Q8IY63 956 aa17.64■□□□□ 0.41
ATG4B-224ENST00000494132 ACER1Q8TDN7 264 aa17.64■□□□□ 0.41
ATG4B-224ENST00000494132 FEZ1Q99689 392 aa17.64■□□□□ 0.41
ATG4B-224ENST00000494132 GINM1Q9NU53 330 aa17.64■□□□□ 0.41
ATG4B-224ENST00000494132 SLC45A1Q9Y2W3 748 aa17.64■□□□□ 0.41
ATG4B-224ENST00000494132 MYH4Q9Y623 1939 aa17.64■□□□□ 0.41
ATG4B-224ENST00000494132 GREB1LQ9C091 1923 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-224ENST00000494132 MINDY4BA8MYZ0 360 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 APPP05067 770 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 AKR1B1P15121 316 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 PSMC4P43686 418 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 CDK8P49336 464 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 KIF22Q14807 665 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 LRRFIP1Q32MZ4 808 aaKnown RBP17.63■□□□□ 0.41
ATG4B-224ENST00000494132 ZMYM1Q5SVZ6 1142 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 ANKRD13CQ8N6S4 541 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 EMILIN3Q9NT22 766 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 PTCH2Q9Y6C5 1203 aa17.63■□□□□ 0.41
ATG4B-224ENST00000494132 KIAA0100Q14667 2235 aaKnown RBP17.62■□□□□ 0.41
ATG4B-224ENST00000494132 TRIM6-TRIM34B2RNG4 842 aa17.62■□□□□ 0.41
ATG4B-224ENST00000494132 PEX10O60683 326 aa17.62■□□□□ 0.41
ATG4B-224ENST00000494132 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms