RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 SAP30BPQ9UHR5 308 aaKnown RBP11.13□□□□□ -0.63
NFIA-213ENST00000493627 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
NFIA-213ENST00000493627 PALD1Q9ULE6 856 aa11.13□□□□□ -0.63
NFIA-213ENST00000493627 EXOC6BQ9Y2D4 811 aa11.13□□□□□ -0.63
NFIA-213ENST00000493627 FOCADQ5VW36 1801 aa11.13□□□□□ -0.63
NFIA-213ENST00000493627 H0YGN5 161 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 GDF11O95390 407 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 HLA-DOAP06340 250 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 BACE1P56817 501 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 JAG1P78504 1218 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 SHROOM1Q2M3G4 852 aaPredicted RBP11.12□□□□□ -0.63
NFIA-213ENST00000493627 UBE2Q1Q7Z7E8 422 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 AACSQ86V21 672 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 CERS3Q8IU89 383 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 FOXP4Q8IVH2 680 aaPredicted RBP11.12□□□□□ -0.63
NFIA-213ENST00000493627 MAGEB6Q8N7X4 407 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 PXYLP1Q8TE99 480 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 U2AF1L4Q8WU68 220 aaKnown RBP11.12□□□□□ -0.63
NFIA-213ENST00000493627 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 NDUFB9Q9Y6M9 179 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 CDK5RAP2Q96SN8 1893 aa11.12□□□□□ -0.63
NFIA-213ENST00000493627 FARP2O94887 1054 aaPredicted RBP11.11□□□□□ -0.63
NFIA-213ENST00000493627 USP5P45974 858 aa11.11□□□□□ -0.63
NFIA-213ENST00000493627 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
NFIA-213ENST00000493627 MAP3K12Q12852 859 aa11.11□□□□□ -0.63
NFIA-213ENST00000493627 ANTXR1Q9H6X2 564 aa11.11□□□□□ -0.63
NFIA-213ENST00000493627 GINM1Q9NU53 330 aa11.11□□□□□ -0.63
NFIA-213ENST00000493627 MYO5AQ9Y4I1 1855 aaKnown RBP11.1□□□□□ -0.63
NFIA-213ENST00000493627 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
NFIA-213ENST00000493627 HSP90AB4PQ58FF6 505 aa11.1□□□□□ -0.63
NFIA-213ENST00000493627 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
NFIA-213ENST00000493627 HTATIP2Q9BUP3 242 aa11.1□□□□□ -0.63
NFIA-213ENST00000493627 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
NFIA-213ENST00000493627 PAK6Q9NQU5 681 aaPredicted RBP11.1□□□□□ -0.63
NFIA-213ENST00000493627 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
NFIA-213ENST00000493627 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
NFIA-213ENST00000493627 CEP290O15078 2479 aa11.1□□□□□ -0.63
NFIA-213ENST00000493627 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
NFIA-213ENST00000493627 C19orf81C9J6K1 198 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 USP17L10C9JJH3 530 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 SGPL1O95470 568 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 GH2P01242 217 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 HMGCRP04035 888 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 MS4A1P11836 297 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 HOXA7P31268 230 aaPredicted RBP11.09□□□□□ -0.63
NFIA-213ENST00000493627 HERVK_113P62684 666 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 TMED8Q6PL24 325 aaPredicted RBP11.09□□□□□ -0.63
NFIA-213ENST00000493627 RHPN1Q8TCX5 695 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 DPF3Q92784 378 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 EHD4Q9H223 541 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 SERPINB13Q9UIV8 391 aa11.09□□□□□ -0.63
NFIA-213ENST00000493627 FXR1P51114 621 aaKnown RBP eCLIP11.08□□□□□ -0.64
NFIA-213ENST00000493627 SOCS4Q8WXH5 440 aa11.08□□□□□ -0.64
NFIA-213ENST00000493627 KIF1BPQ96EK5 621 aa11.08□□□□□ -0.64
NFIA-213ENST00000493627 P2RX7Q99572 595 aaKnown RBP11.08□□□□□ -0.64
NFIA-213ENST00000493627 FEZ1Q99689 392 aa11.08□□□□□ -0.64
NFIA-213ENST00000493627 RIOK1Q9BRS2 568 aaKnown RBP11.08□□□□□ -0.64
NFIA-213ENST00000493627 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.08□□□□□ -0.64
NFIA-213ENST00000493627 TXNRD2Q9NNW7 524 aa11.08□□□□□ -0.64
NFIA-213ENST00000493627 GJD2Q9UKL4 321 aa11.08□□□□□ -0.64
NFIA-213ENST00000493627 NAV1Q8NEY1 1877 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 APBB1O00213 710 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 PEX10O60683 326 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 HMMRO75330 724 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 PDE6AP16499 860 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 CAPN2P17655 700 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 TTF1Q15361 905 aaPredicted RBP11.07□□□□□ -0.64
NFIA-213ENST00000493627 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 USP17L2Q6R6M4 530 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 CLASRPQ8N2M8 674 aaKnown RBP11.07□□□□□ -0.64
NFIA-213ENST00000493627 GPRC5AQ8NFJ5 357 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 GTF3C2Q8WUA4 911 aaPredicted RBP11.07□□□□□ -0.64
NFIA-213ENST00000493627 C12orf42Q96LP6 360 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 DNAJC2Q99543 621 aaKnown RBP11.07□□□□□ -0.64
NFIA-213ENST00000493627 CRISPLD2Q9H0B8 497 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 DDX19BQ9UMR2 479 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
NFIA-213ENST00000493627 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
NFIA-213ENST00000493627 MYH1P12882 1939 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 GOLIM4O00461 696 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
NFIA-213ENST00000493627 IFIT2P09913 472 aaKnown RBP11.06□□□□□ -0.64
NFIA-213ENST00000493627 SHMT1P34896 483 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 ERVK-24P63145 666 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 TRIM32Q13049 653 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 RAB3GAP1Q15042 981 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 ZYXQ15942 572 aaKnown RBP11.06□□□□□ -0.64
NFIA-213ENST00000493627 CERKLQ49MI3 558 aaPredicted RBP11.06□□□□□ -0.64
NFIA-213ENST00000493627 SLC9C2Q5TAH2 1124 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 SIRT2Q8IXJ6 389 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 RPAP2Q8IXW5 612 aaPredicted RBP11.06□□□□□ -0.64
NFIA-213ENST00000493627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.06□□□□□ -0.64
NFIA-213ENST00000493627 TRIB2Q92519 343 aa11.06□□□□□ -0.64
NFIA-213ENST00000493627 PAGR1Q9BTK6 254 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms