RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 GINM1Q9NU53 330 aa21.76■■□□□ 1.07
NUP50-218ENST00000493456 LRP2BPQ9P2M1 347 aa21.76■■□□□ 1.07
NUP50-218ENST00000493456 PFASO15067 1338 aa21.76■■□□□ 1.07
NUP50-218ENST00000493456 MAST2Q6P0Q8 1798 aa21.75■■□□□ 1.07
NUP50-218ENST00000493456 BAG3O95817 575 aa21.75■■□□□ 1.07
NUP50-218ENST00000493456 ZKSCAN1P17029 563 aaPredicted RBP21.75■■□□□ 1.07
NUP50-218ENST00000493456 SH3RF3Q8TEJ3 882 aaPredicted RBP21.75■■□□□ 1.07
NUP50-218ENST00000493456 P2RX7Q99572 595 aaKnown RBP21.75■■□□□ 1.07
NUP50-218ENST00000493456 UBE2OQ9C0C9 1292 aaKnown RBP21.75■■□□□ 1.07
NUP50-218ENST00000493456 SIPA1L1O43166 1804 aa21.75■■□□□ 1.07
NUP50-218ENST00000493456 UQCRFS1P1P0C7P4 283 aa21.74■■□□□ 1.07
NUP50-218ENST00000493456 COL6A1P12109 1028 aa21.74■■□□□ 1.07
NUP50-218ENST00000493456 MCAMP43121 646 aa21.74■■□□□ 1.07
NUP50-218ENST00000493456 Q7L0L9 218 aa21.74■■□□□ 1.07
NUP50-218ENST00000493456 METTL16Q86W50 562 aaKnown RBP21.74■■□□□ 1.07
NUP50-218ENST00000493456 TXNRD2Q9NNW7 524 aa21.74■■□□□ 1.07
NUP50-218ENST00000493456 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.74■■□□□ 1.07
NUP50-218ENST00000493456 USP17L10C9JJH3 530 aa21.73■■□□□ 1.07
NUP50-218ENST00000493456 RGS2P41220 211 aa21.73■■□□□ 1.07
NUP50-218ENST00000493456 ERVK-9P63128 1117 aa21.73■■□□□ 1.07
NUP50-218ENST00000493456 ERVK-24P63145 666 aa21.73■■□□□ 1.07
NUP50-218ENST00000493456 NAA16Q6N069 864 aaPredicted RBP21.73■■□□□ 1.07
NUP50-218ENST00000493456 CCAR1Q8IX12 1150 aaKnown RBP21.73■■□□□ 1.07
NUP50-218ENST00000493456 ARHGAP45Q92619 1136 aa21.73■■□□□ 1.07
NUP50-218ENST00000493456 TRIM34Q9BYJ4 488 aa21.73■■□□□ 1.07
NUP50-218ENST00000493456 CACNB2Q08289 660 aaPredicted RBP21.72■■□□□ 1.07
NUP50-218ENST00000493456 FOXP4Q8IVH2 680 aaPredicted RBP21.72■■□□□ 1.07
NUP50-218ENST00000493456 CRACR2BQ8N4Y2 399 aaPredicted RBP21.72■■□□□ 1.07
NUP50-218ENST00000493456 USP6NLQ92738 828 aa21.72■■□□□ 1.07
NUP50-218ENST00000493456 APBA2Q99767 749 aa21.72■■□□□ 1.07
NUP50-218ENST00000493456 DNAJC18Q9H819 358 aa21.72■■□□□ 1.07
NUP50-218ENST00000493456 MTMR10Q9NXD2 777 aa21.72■■□□□ 1.07
NUP50-218ENST00000493456 AATFQ9NY61 560 aaKnown RBP eCLIP21.72■■□□□ 1.07
NUP50-218ENST00000493456 FLT1P17948 1338 aa21.72■■□□□ 1.07
NUP50-218ENST00000493456 IGSF3O75054 1194 aa21.71■■□□□ 1.07
NUP50-218ENST00000493456 PPP4CP60510 307 aa21.71■■□□□ 1.07
NUP50-218ENST00000493456 MORN1Q5T089 497 aa21.71■■□□□ 1.07
NUP50-218ENST00000493456 GPR142Q7Z601 462 aa21.71■■□□□ 1.07
NUP50-218ENST00000493456 RBPJLQ9UBG7 517 aa21.71■■□□□ 1.07
NUP50-218ENST00000493456 EYSQ5T1H1 3165 aa21.71■■□□□ 1.07
NUP50-218ENST00000493456 LHX8Q68G74 356 aa21.7■■□□□ 1.06
NUP50-218ENST00000493456 PLEKHH3Q7Z736 793 aa21.7■■□□□ 1.06
NUP50-218ENST00000493456 TGFBRAP1Q8WUH2 860 aa21.7■■□□□ 1.06
NUP50-218ENST00000493456 ZBTB21Q9ULJ3 1066 aa21.7■■□□□ 1.06
NUP50-218ENST00000493456 FOCADQ5VW36 1801 aa21.7■■□□□ 1.06
NUP50-218ENST00000493456 PEX10O60683 326 aa21.69■■□□□ 1.06
NUP50-218ENST00000493456 JAG1P78504 1218 aa21.69■■□□□ 1.06
NUP50-218ENST00000493456 G3BP1Q13283 466 aaKnown RBP eCLIP21.69■■□□□ 1.06
NUP50-218ENST00000493456 ATF7IPQ6VMQ6 1270 aa21.69■■□□□ 1.06
NUP50-218ENST00000493456 MAPKAPK5Q8IW41 473 aa21.69■■□□□ 1.06
NUP50-218ENST00000493456 PORCNQ9H237 461 aa21.69■■□□□ 1.06
NUP50-218ENST00000493456 VCANP13611 3396 aa21.68■■□□□ 1.06
NUP50-218ENST00000493456 GDF11O95390 407 aa21.68■■□□□ 1.06
NUP50-218ENST00000493456 GNAI2P04899 355 aa21.68■■□□□ 1.06
NUP50-218ENST00000493456 HLA-DOAP06340 250 aa21.68■■□□□ 1.06
NUP50-218ENST00000493456 CCND3P30281 292 aaPredicted RBP21.68■■□□□ 1.06
NUP50-218ENST00000493456 RARSP54136 660 aaKnown RBP21.68■■□□□ 1.06
NUP50-218ENST00000493456 LRRC26Q2I0M4 334 aa21.68■■□□□ 1.06
NUP50-218ENST00000493456 Q3C1V9 767 aa21.68■■□□□ 1.06
NUP50-218ENST00000493456 USP17L2Q6R6M4 530 aa21.68■■□□□ 1.06
NUP50-218ENST00000493456 PAGR1Q9BTK6 254 aa21.68■■□□□ 1.06
NUP50-218ENST00000493456 CWC22Q9HCG8 908 aaKnown RBP21.68■■□□□ 1.06
NUP50-218ENST00000493456 CDK5RAP2Q96SN8 1893 aa21.67■■□□□ 1.06
NUP50-218ENST00000493456 CCNA1P78396 465 aa21.67■■□□□ 1.06
NUP50-218ENST00000493456 CCL14Q16627 93 aa21.67■■□□□ 1.06
NUP50-218ENST00000493456 PALD1Q9ULE6 856 aa21.67■■□□□ 1.06
NUP50-218ENST00000493456 RABGAP1Q9Y3P9 1069 aa21.67■■□□□ 1.06
NUP50-218ENST00000493456 GLRX3O76003 335 aaKnown RBP21.66■■□□□ 1.06
NUP50-218ENST00000493456 SHROOM1Q2M3G4 852 aaPredicted RBP21.66■■□□□ 1.06
NUP50-218ENST00000493456 TTC39AQ5SRH9 613 aa21.66■■□□□ 1.06
NUP50-218ENST00000493456 C12orf42Q96LP6 360 aa21.66■■□□□ 1.06
NUP50-218ENST00000493456 GPR108Q9NPR9 543 aa21.66■■□□□ 1.06
NUP50-218ENST00000493456 EMILIN3Q9NT22 766 aa21.66■■□□□ 1.06
NUP50-218ENST00000493456 FRMPD3Q5JV73 1810 aa21.65■■□□□ 1.06
NUP50-218ENST00000493456 MDM2Q00987 491 aaPredicted RBP21.65■■□□□ 1.06
NUP50-218ENST00000493456 MAP2K5Q13163 448 aa21.65■■□□□ 1.06
NUP50-218ENST00000493456 CCDC158Q5M9N0 1113 aa21.65■■□□□ 1.06
NUP50-218ENST00000493456 FAM109BQ6ICB4 259 aaPredicted RBP21.65■■□□□ 1.06
NUP50-218ENST00000493456 ADGRA1Q86SQ6 560 aa21.65■■□□□ 1.06
NUP50-218ENST00000493456 SNRKQ9NRH2 765 aa21.65■■□□□ 1.06
NUP50-218ENST00000493456 PNMA6EA0A0J9YXQ4 647 aa21.64■■□□□ 1.05
NUP50-218ENST00000493456 MSCO60682 206 aa21.64■■□□□ 1.05
NUP50-218ENST00000493456 MFSD14CQ5VZR4 134 aa21.64■■□□□ 1.05
NUP50-218ENST00000493456 POTEEQ6S8J3 1075 aa21.64■■□□□ 1.05
NUP50-218ENST00000493456 CERS3Q8IU89 383 aa21.64■■□□□ 1.05
NUP50-218ENST00000493456 EDC3Q96F86 508 aaKnown RBP21.64■■□□□ 1.05
NUP50-218ENST00000493456 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 CYP2E1P05181 493 aaPredicted RBP21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP14P54578 494 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 TNNI3KQ59H18 835 aa21.63■■□□□ 1.05
NUP50-218ENST00000493456 ZNF512BQ96KM6 892 aaPredicted RBP21.63■■□□□ 1.05
NUP50-218ENST00000493456 FEZ1Q99689 392 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms