RNA–Protein interactions for RNA: ENST00000492348.6

RBBP4-214, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 1,547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-214ENST00000492348 MAP3K12Q12852 859 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
RBBP4-214ENST00000492348 PTPRNQ16849 979 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 FOXD4L5Q5VV16 416 aaPredicted RBP8.37□□□□□ -1.07
RBBP4-214ENST00000492348 DHX32Q7L7V1 743 aaKnown RBP8.37□□□□□ -1.07
RBBP4-214ENST00000492348 LCORLQ8N3X6 602 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 ZNF384Q8TF68 577 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
RBBP4-214ENST00000492348 ANKRD2Q9GZV1 360 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 PRDM9Q9NQV7 894 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 CTNNA3Q9UI47 895 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 SMC3Q9UQE7 1217 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.37□□□□□ -1.07
RBBP4-214ENST00000492348 BRCA1P38398 1863 aaKnown RBP8.37□□□□□ -1.07
RBBP4-214ENST00000492348 PNPLA7Q6ZV29 1317 aa8.37□□□□□ -1.07
RBBP4-214ENST00000492348 WDR33Q9C0J8 1336 aaKnown RBP8.37□□□□□ -1.07
RBBP4-214ENST00000492348 HMGB1P09429 215 aaKnown RBP8.36□□□□□ -1.07
RBBP4-214ENST00000492348 SYT1P21579 422 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 ST5P78524 1137 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 ALX1Q15699 326 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 IMMTQ16891 758 aaKnown RBP8.36□□□□□ -1.07
RBBP4-214ENST00000492348 MCTP1Q6DN14 999 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 TXNRD3Q86VQ6 643 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 BRF1Q92994 677 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 ZMYND15Q9H091 742 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 ARMT1Q9H993 441 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 HMX1Q9NP08 348 aaPredicted RBP8.36□□□□□ -1.07
RBBP4-214ENST00000492348 LMBRD1Q9NUN5 540 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 TFCP2L1Q9NZI6 479 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 DENND2AQ9ULE3 1009 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 NEDD4P46934 1319 aa8.36□□□□□ -1.07
RBBP4-214ENST00000492348 SIPA1L1O43166 1804 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 NPHP1O15259 732 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 STX6O43752 255 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 RAD21O60216 631 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 PFKFB2O60825 505 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 APBA3O96018 575 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 PTMSP20962 102 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 APOBRQ0VD83 1088 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 SCRN1Q12765 414 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 STK3Q13188 491 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 COL23A1Q86Y22 540 aaPredicted RBP8.35□□□□□ -1.07
RBBP4-214ENST00000492348 FBXL16Q8N461 479 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 AIDAQ96BJ3 306 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 PRM3Q9NNZ6 103 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 GNL3LQ9NVN8 582 aaKnown RBP8.35□□□□□ -1.07
RBBP4-214ENST00000492348 MTMR6Q9Y217 621 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 TACC3Q9Y6A5 838 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 WDR19Q8NEZ3 1342 aa8.35□□□□□ -1.07
RBBP4-214ENST00000492348 KLRG2A4D1S0 409 aaPredicted RBP8.34□□□□□ -1.07
RBBP4-214ENST00000492348 GSG1L2A8MUP6 293 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 PRKAB2O43741 272 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 JAK2O60674 1132 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 S1PR4O95977 384 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 F13A1P00488 732 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 ZSCAN22P10073 491 aaPredicted RBP8.34□□□□□ -1.07
RBBP4-214ENST00000492348 HOXA10P31260 410 aaPredicted RBP8.34□□□□□ -1.07
RBBP4-214ENST00000492348 EVCP57679 992 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 GPSM2P81274 684 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 CAVIN4Q5BKX8 364 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 CHST3Q7LGC8 479 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 RPGRQ92834 1020 aaKnown RBP8.34□□□□□ -1.07
RBBP4-214ENST00000492348 GPR101Q96P66 508 aaPredicted RBP8.34□□□□□ -1.07
RBBP4-214ENST00000492348 RIOK1Q9BRS2 568 aaKnown RBP8.34□□□□□ -1.07
RBBP4-214ENST00000492348 LRP2BPQ9P2M1 347 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 XDHP47989 1333 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 SALL1Q9NSC2 1324 aa8.34□□□□□ -1.07
RBBP4-214ENST00000492348 PATL2C9JE40 543 aaKnown RBP8.34□□□□□ -1.08
RBBP4-214ENST00000492348 ZNF213O14771 459 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 PRC1O43663 620 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 CTDNEP1O95476 244 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 CCNYL3P0C7X3 344 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 CYP7A1P22680 504 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 HIBADHP31937 336 aaKnown RBP8.34□□□□□ -1.08
RBBP4-214ENST00000492348 KLHL40Q2TBA0 621 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 C15orf52Q6ZUT6 534 aaKnown RBP8.34□□□□□ -1.08
RBBP4-214ENST00000492348 CYB5R4Q7L1T6 521 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 CDC37L1Q7L3B6 337 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 VPS37DQ86XT2 251 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 IFNL3Q8IZI9 196 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 MIGA1Q8NAN2 632 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 NSUN7Q8NE18 718 aaKnown RBP8.34□□□□□ -1.08
RBBP4-214ENST00000492348 SMARCC2Q8TAQ2 1214 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 ABCF2Q9UG63 623 aa8.34□□□□□ -1.08
RBBP4-214ENST00000492348 GREB1LQ9C091 1923 aaPredicted RBP8.33□□□□□ -1.08
RBBP4-214ENST00000492348 ARFGEF1Q9Y6D6 1849 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 GOLGA6L22H0YM25 854 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 TMEM87AQ8NBN3 555 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 NCOA7Q8NI08 942 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 GPT2Q8TD30 523 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 NSUN4Q96CB9 384 aaKnown RBP8.33□□□□□ -1.08
RBBP4-214ENST00000492348 CRAMP1Q96RY5 1269 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 NAPBQ9H115 298 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 GZF1Q9H116 711 aaPredicted RBP8.33□□□□□ -1.08
RBBP4-214ENST00000492348 RAI14Q9P0K7 980 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 BRPF3Q9ULD4 1205 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
RBBP4-214ENST00000492348 MYH4Q9Y623 1939 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms