RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	IRF2BP1	Q8IU81	584 aa		4.29	□□□□□ -1.72
PUM3-204	ENST00000490444	GPR20	Q99678	358 aa		4.29	□□□□□ -1.72
PUM3-204	ENST00000490444	ZNF576	Q9H609	170 aa		4.29	□□□□□ -1.72
PUM3-204	ENST00000490444	EIF1AY	O14602	144 aa	Known RBP	4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	P4HB	P07237	508 aa	Known RBP	4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	ITPKA	P23677	461 aa		4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	MFAP1	P55081	439 aa	Known RBP	4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	ENOX2	Q16206	610 aa	Known RBP	4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	FBXO33	Q7Z6M2	555 aa		4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	LSR	Q86X29	649 aa	Predicted RBP	4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	MYLIP	Q8WY64	445 aa		4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	SETDB2	Q96T68	719 aa		4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	DNAJC25	Q9H1X3	360 aa		4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	ATP13A1	Q9HD20	1204 aa		4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	PODXL2	Q9NZ53	605 aa		4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	PCDHGC5	Q9Y5F6	944 aa		4.28	□□□□□ -1.72
PUM3-204	ENST00000490444	TEX51	A0A1B0GUA7	166 aa		4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	MYOCOS	A0A1B0GUC4	107 aa		4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	ZC3H12D	A2A288	527 aa	Known RBP	4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	CPNE3	O75131	537 aa	Known RBP	4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	HCLS1	P14317	486 aa	Predicted RBP	4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	LIG1	P18858	919 aa		4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	PLCB3	Q01970	1234 aa		4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	PTPN12	Q05209	780 aa	Known RBP	4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	KIF4B	Q2VIQ3	1234 aa		4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	WDR89	Q96FK6	387 aa	Predicted RBP	4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	CNOT11	Q9UKZ1	510 aa	Known RBP	4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	WWC3	Q9ULE0	1092 aa		4.27	□□□□□ -1.73
PUM3-204	ENST00000490444	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	GADD45B	O75293	160 aa	Predicted RBP	4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	HPX	P02790	462 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	TNFRSF1A	P19438	455 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	TAGLN	Q01995	201 aa	Known RBP	4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	PLP2	Q04941	152 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	TTC6	Q86TZ1	520 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	SP8	Q8IXZ3	490 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	RGS22	Q8NE09	1264 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	FEZF2	Q8TBJ5	459 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	TMC1	Q8TDI8	760 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	ISL2	Q96A47	359 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	CCDC74A	Q96AQ1	378 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	SORCS2	Q96PQ0	1159 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	FOXQ1	Q9C009	403 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	CCDC86	Q9H6F5	360 aa	Known RBP	4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	GCM1	Q9NP62	436 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	NPHS2	Q9NP85	383 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	PRDM10	Q9NQV6	1147 aa		4.26	□□□□□ -1.73
PUM3-204	ENST00000490444	PNMA6F	A0A0J9YX94	578 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	TMEM238L	A0A1B0GVL6	79 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	NEFM	P07197	916 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	ERCC3	P19447	782 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	ZNF157	P51786	506 aa	Predicted RBP	4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	HHIPL2	Q6UWX4	724 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	PI16	Q6UXB8	463 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	SLC16A11	Q8NCK7	471 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	EPS8L3	Q8TE67	593 aa	Known RBP	4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	HSPA12B	Q96MM6	686 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	MENT	Q9BUN1	341 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	ZC3H12C	Q9C0D7	883 aa	Known RBP	4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	KRT82	Q9NSB4	513 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	RNF19A	Q9NV58	838 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	TRAK1	Q9UPV9	953 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	MAPK8IP1	Q9UQF2	711 aa		4.25	□□□□□ -1.73
PUM3-204	ENST00000490444	ZNF862	O60290	1169 aa		4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	MAPK8	P45983	427 aa		4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	SSPN	Q14714	243 aa		4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	PRPF40B	Q6NWY9	871 aa	Known RBP	4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	FRMD5	Q7Z6J6	570 aa		4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	DACT3	Q96B18	629 aa	Predicted RBP	4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	SLC6A17	Q9H1V8	727 aa		4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	ABCB6	Q9NP58	842 aa		4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	SSU72	Q9NP77	194 aa	Known RBP	4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	PPP4R2	Q9NY27	417 aa		4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	PALD1	Q9ULE6	856 aa		4.24	□□□□□ -1.73
PUM3-204	ENST00000490444	GSTP1	P09211	210 aa	Known RBP	4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	ERVFC1	P60507	584 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	PPP2R3A	Q06190	1150 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	TMEM132E	Q6IEE7	984 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	C22orf34	Q6ZV56	151 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	THAP5	Q7Z6K1	395 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	ZDHHC14	Q8IZN3	488 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	FBF1	Q8TES7	1133 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	RNF32	Q9H0A6	362 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	SLAMF8	Q9P0V8	285 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	TMEM59L	Q9UK28	342 aa		4.23	□□□□□ -1.73
PUM3-204	ENST00000490444	SLC22A31	A6NKX4	558 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	PRPF40A	O75400	957 aa	Known RBP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	EOMES	O95936	686 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	LDHB	P07195	334 aa	Known RBP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	AFF3	P51826	1226 aa	Known RBP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	HMGA2	P52926	109 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	FAAP100	Q0VG06	881 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	GRM2	Q14416	872 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	EAPP	Q56P03	285 aa	Predicted RBP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	DTHD1	Q6ZMT9	781 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms