RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 BACE1P56817 501 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 JAG1P78504 1218 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 GCC1Q96CN9 775 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 ARMT1Q9H993 441 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 ZBTB47Q9UFB7 747 aaPredicted RBP21.08■□□□□ 0.97
ATG3-205ENST00000488910 ZBTB21Q9ULJ3 1066 aa21.08■□□□□ 0.97
ATG3-205ENST00000488910 ERC2O15083 957 aa21.07■□□□□ 0.96
ATG3-205ENST00000488910 MBD4O95243 580 aa21.07■□□□□ 0.96
ATG3-205ENST00000488910 SLFNL1Q499Z3 407 aa21.07■□□□□ 0.96
ATG3-205ENST00000488910 CERKLQ49MI3 558 aaPredicted RBP21.07■□□□□ 0.96
ATG3-205ENST00000488910 KBTBD3Q8NAB2 608 aa21.07■□□□□ 0.96
ATG3-205ENST00000488910 SDR42E1Q8WUS8 393 aa21.07■□□□□ 0.96
ATG3-205ENST00000488910 MYH7P12883 1935 aa21.07■□□□□ 0.96
ATG3-205ENST00000488910 USP17L10C9JJH3 530 aa21.06■□□□□ 0.96
ATG3-205ENST00000488910 GH2P01242 217 aa21.06■□□□□ 0.96
ATG3-205ENST00000488910 HOXD10P28358 340 aa21.06■□□□□ 0.96
ATG3-205ENST00000488910 PSMC4P43686 418 aa21.06■□□□□ 0.96
ATG3-205ENST00000488910 GABPAQ06546 454 aa21.06■□□□□ 0.96
ATG3-205ENST00000488910 TREML2Q5T2D2 321 aa21.06■□□□□ 0.96
ATG3-205ENST00000488910 SMCR8Q8TEV9 937 aaPredicted RBP21.06■□□□□ 0.96
ATG3-205ENST00000488910 ARHGAP39Q9C0H5 1083 aa21.06■□□□□ 0.96
ATG3-205ENST00000488910 TMOD4Q9NZQ9 345 aa21.06■□□□□ 0.96
ATG3-205ENST00000488910 GLRX3O76003 335 aaKnown RBP21.05■□□□□ 0.96
ATG3-205ENST00000488910 ZFYP08048 801 aaPredicted RBP21.05■□□□□ 0.96
ATG3-205ENST00000488910 OSBPP22059 807 aa21.05■□□□□ 0.96
ATG3-205ENST00000488910 SOX10P56693 466 aa21.05■□□□□ 0.96
ATG3-205ENST00000488910 MLLT1Q03111 559 aaPredicted RBP21.05■□□□□ 0.96
ATG3-205ENST00000488910 MTMR2Q13614 643 aa21.05■□□□□ 0.96
ATG3-205ENST00000488910 LRRFIP1Q32MZ4 808 aaKnown RBP21.05■□□□□ 0.96
ATG3-205ENST00000488910 TSHZ3Q63HK5 1081 aa21.05■□□□□ 0.96
ATG3-205ENST00000488910 DDRGK1Q96HY6 314 aa21.05■□□□□ 0.96
ATG3-205ENST00000488910 CABP5Q9NP86 173 aa21.05■□□□□ 0.96
ATG3-205ENST00000488910 HTTP42858 3142 aa21.05■□□□□ 0.96
ATG3-205ENST00000488910 PRKAB2O43741 272 aa21.04■□□□□ 0.96
ATG3-205ENST00000488910 FMNL1O95466 1100 aaPredicted RBP21.04■□□□□ 0.96
ATG3-205ENST00000488910 SHMT1P34896 483 aa21.04■□□□□ 0.96
ATG3-205ENST00000488910 ABCB5Q2M3G0 1257 aa21.04■□□□□ 0.96
ATG3-205ENST00000488910 SHROOM1Q2M3G4 852 aaPredicted RBP21.04■□□□□ 0.96
ATG3-205ENST00000488910 ANKRD45Q5TZF3 282 aa21.04■□□□□ 0.96
ATG3-205ENST00000488910 NBPF11Q86T75 865 aa21.04■□□□□ 0.96
ATG3-205ENST00000488910 ARMC5Q96C12 935 aa21.04■□□□□ 0.96
ATG3-205ENST00000488910 PUS7LQ9H0K6 701 aaKnown RBP21.04■□□□□ 0.96
ATG3-205ENST00000488910 NAV1Q8NEY1 1877 aa21.04■□□□□ 0.96
ATG3-205ENST00000488910 LOC285556D6RIA3 1793 aa21.03■□□□□ 0.96
ATG3-205ENST00000488910 RNF113AO15541 343 aaKnown RBP21.03■□□□□ 0.96
ATG3-205ENST00000488910 CHGBP05060 677 aa21.03■□□□□ 0.96
ATG3-205ENST00000488910 HOXA7P31268 230 aaPredicted RBP21.03■□□□□ 0.96
ATG3-205ENST00000488910 GCLCP48506 637 aaPredicted RBP21.03■□□□□ 0.96
ATG3-205ENST00000488910 AMOTL1Q8IY63 956 aa21.03■□□□□ 0.96
ATG3-205ENST00000488910 TRIM47Q96LD4 638 aa21.03■□□□□ 0.96
ATG3-205ENST00000488910 SWAP70Q9UH65 585 aa21.03■□□□□ 0.96
ATG3-205ENST00000488910 PTCH2Q9Y6C5 1203 aa21.03■□□□□ 0.96
ATG3-205ENST00000488910 SLC4A4Q9Y6R1 1079 aa21.03■□□□□ 0.96
ATG3-205ENST00000488910 DDX60LQ5H9U9 1706 aaKnown RBP21.03■□□□□ 0.96
ATG3-205ENST00000488910 MX1P20591 662 aa21.02■□□□□ 0.96
ATG3-205ENST00000488910 CTGFP29279 349 aa21.02■□□□□ 0.96
ATG3-205ENST00000488910 FCGRTP55899 365 aa21.02■□□□□ 0.96
ATG3-205ENST00000488910 USP17L2Q6R6M4 530 aa21.02■□□□□ 0.96
ATG3-205ENST00000488910 PI4K2BQ8TCG2 481 aa21.02■□□□□ 0.96
ATG3-205ENST00000488910 APPBP2Q92624 585 aa21.02■□□□□ 0.96
ATG3-205ENST00000488910 RWDD1Q9H446 243 aaPredicted RBP21.02■□□□□ 0.96
ATG3-205ENST00000488910 SRRDQ9UH36 339 aa21.02■□□□□ 0.96
ATG3-205ENST00000488910 RAB3GAP1Q15042 981 aa21.01■□□□□ 0.95
ATG3-205ENST00000488910 SLC9C1Q4G0N8 1177 aa21.01■□□□□ 0.95
ATG3-205ENST00000488910 OTUD7AQ8TE49 926 aaPredicted RBP21.01■□□□□ 0.95
ATG3-205ENST00000488910 STRBPQ96SI9 672 aaKnown RBP21.01■□□□□ 0.95
ATG3-205ENST00000488910 ASCC2Q9H1I8 757 aaPredicted RBP21.01■□□□□ 0.95
ATG3-205ENST00000488910 CENPFP49454 3210 aa21■□□□□ 0.95
ATG3-205ENST00000488910 CYP2D6P10635 497 aa21■□□□□ 0.95
ATG3-205ENST00000488910 USP14P54578 494 aa21■□□□□ 0.95
ATG3-205ENST00000488910 FAM110CQ1W6H9 321 aa21■□□□□ 0.95
ATG3-205ENST00000488910 C12orf60Q5U649 245 aa21■□□□□ 0.95
ATG3-205ENST00000488910 ANKRD13CQ8N6S4 541 aa21■□□□□ 0.95
ATG3-205ENST00000488910 SALL3Q9BXA9 1300 aa21■□□□□ 0.95
ATG3-205ENST00000488910 USP17L12C9JPN9 530 aa20.99■□□□□ 0.95
ATG3-205ENST00000488910 USP17L21D6R901 530 aa20.99■□□□□ 0.95
ATG3-205ENST00000488910 IRX3P78415 501 aaPredicted RBP20.99■□□□□ 0.95
ATG3-205ENST00000488910 GIMAP6Q6P9H5 292 aa20.99■□□□□ 0.95
ATG3-205ENST00000488910 OSBP2Q969R2 916 aa20.99■□□□□ 0.95
ATG3-205ENST00000488910 C12orf42Q96LP6 360 aa20.99■□□□□ 0.95
ATG3-205ENST00000488910 KIAA1683Q9H0B3 1180 aa20.99■□□□□ 0.95
ATG3-205ENST00000488910 EMILIN3Q9NT22 766 aa20.99■□□□□ 0.95
ATG3-205ENST00000488910 STAP2Q9UGK3 403 aa20.99■□□□□ 0.95
ATG3-205ENST00000488910 BAZ2AQ9UIF9 1905 aaKnown RBP20.98■□□□□ 0.95
ATG3-205ENST00000488910 ECM2O94769 699 aaPredicted RBP20.98■□□□□ 0.95
ATG3-205ENST00000488910 GNAT2P19087 354 aa20.98■□□□□ 0.95
ATG3-205ENST00000488910 GUCY1A2P33402 732 aa20.98■□□□□ 0.95
ATG3-205ENST00000488910 EVX2Q03828 476 aa20.98■□□□□ 0.95
ATG3-205ENST00000488910 RAET1EQ8TD07 263 aa20.98■□□□□ 0.95
ATG3-205ENST00000488910 ZNF333Q96JL9 665 aa20.98■□□□□ 0.95
ATG3-205ENST00000488910 CCDC17Q96LX7 622 aa20.98■□□□□ 0.95
ATG3-205ENST00000488910 FEZ1Q99689 392 aa20.98■□□□□ 0.95
ATG3-205ENST00000488910 ZSWIM8A7E2V4 1837 aa20.98■□□□□ 0.95
ATG3-205ENST00000488910 MGAMO43451 1857 aa20.97■□□□□ 0.95
ATG3-205ENST00000488910 MPHOSPH10O00566 681 aaKnown RBP20.97■□□□□ 0.95
ATG3-205ENST00000488910 SEPT2Q15019 361 aa20.97■□□□□ 0.95
ATG3-205ENST00000488910 CTR9Q6PD62 1173 aa20.97■□□□□ 0.95
ATG3-205ENST00000488910 TMEM179Q6ZVK1 233 aa20.97■□□□□ 0.95
ATG3-205ENST00000488910 EXOC6Q8TAG9 804 aa20.97■□□□□ 0.95
ATG3-205ENST00000488910 DYNLL2Q96FJ2 89 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms