RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 BACE1P56817 501 aa13.83□□□□□ -0.2
SPEN-205ENST00000487496 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
SPEN-205ENST00000487496 ZSCAN25Q6NSZ9 544 aa13.83□□□□□ -0.2
SPEN-205ENST00000487496 DCP1AQ9NPI6 582 aaPredicted RBP13.83□□□□□ -0.2
SPEN-205ENST00000487496 MCM9Q9NXL9 1143 aa13.83□□□□□ -0.2
SPEN-205ENST00000487496 PTPRFP10586 1907 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 PRKAB2O43741 272 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 GH2P01242 217 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 PSMC4P43686 418 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 GABPAQ06546 454 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 MTMR2Q13614 643 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 CERKLQ49MI3 558 aaPredicted RBP13.82□□□□□ -0.2
SPEN-205ENST00000487496 SMCR8Q8TEV9 937 aaPredicted RBP13.82□□□□□ -0.2
SPEN-205ENST00000487496 ARMC5Q96C12 935 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 TRIM47Q96LD4 638 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 PTCH2Q9Y6C5 1203 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 MYH1P12882 1939 aa13.82□□□□□ -0.2
SPEN-205ENST00000487496 ATAD5Q96QE3 1844 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 C19orf81C9J6K1 198 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 USP17L10C9JJH3 530 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 FMNL1O95466 1100 aaPredicted RBP13.81□□□□□ -0.2
SPEN-205ENST00000487496 SHMT1P34896 483 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 PRMT2P55345 433 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 EVX2Q03828 476 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.25e-6■□□□□ 10
SPEN-205ENST00000487496 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 OTUD7AQ8TE49 926 aaPredicted RBP13.81□□□□□ -0.2
SPEN-205ENST00000487496 PUS7LQ9H0K6 701 aaKnown RBP13.81□□□□□ -0.2
SPEN-205ENST00000487496 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 PNMA3Q9UL41 463 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 TTC41PQ6P2S7 1318 aa13.81□□□□□ -0.2
SPEN-205ENST00000487496 CYP2D6P10635 497 aa13.8□□□□□ -0.2
SPEN-205ENST00000487496 OSBPP22059 807 aa13.8□□□□□ -0.2
SPEN-205ENST00000487496 HDAC1Q13547 482 aaPredicted RBP13.8□□□□□ -0.2
SPEN-205ENST00000487496 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
SPEN-205ENST00000487496 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
SPEN-205ENST00000487496 SRRDQ9UH36 339 aa13.8□□□□□ -0.2
SPEN-205ENST00000487496 ZSWIM8A7E2V4 1837 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 HOXD10P28358 340 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 HOXA7P31268 230 aaPredicted RBP13.79□□□□□ -0.2
SPEN-205ENST00000487496 FCGRTP55899 365 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 AAMPQ13685 434 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 RAB3GAP1Q15042 981 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 SLC9C1Q4G0N8 1177 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 ANKRD45Q5TZF3 282 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 NBPF11Q86T75 865 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 ANKRD13CQ8N6S4 541 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 PI4K2BQ8TCG2 481 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 ZNF333Q96JL9 665 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
SPEN-205ENST00000487496 CABP5Q9NP86 173 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 SLC4A4Q9Y6R1 1079 aa13.79□□□□□ -0.2
SPEN-205ENST00000487496 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
SPEN-205ENST00000487496 LOC285556D6RIA3 1793 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 USP17L12C9JPN9 530 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 USP17L21D6R901 530 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 ERC2O15083 957 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
SPEN-205ENST00000487496 GLRX3O76003 335 aaKnown RBP13.78□□□□□ -0.2
SPEN-205ENST00000487496 GCLCP48506 637 aaPredicted RBP13.78□□□□□ -0.2
SPEN-205ENST00000487496 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 USP17L2Q6R6M4 530 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 SLC44A5Q8NCS7 719 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 GCC1Q96CN9 775 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 STRBPQ96SI9 672 aaKnown RBP13.78□□□□□ -0.2
SPEN-205ENST00000487496 SWAP70Q9UH65 585 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
SPEN-205ENST00000487496 CYP2D7A0A087X1C5 515 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 ZFYP08048 801 aaPredicted RBP13.77□□□□□ -0.21
SPEN-205ENST00000487496 MX1P20591 662 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 GUCY1A2P33402 732 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 PRKCZQ05513 592 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 C12orf60Q5U649 245 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 MYPNQ86TC9 1320 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 ACER1Q8TDN7 264 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 SH3TC2Q8TF17 1288 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 APPBP2Q92624 585 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 OSBP2Q969R2 916 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 DYNLL2Q96FJ2 89 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 DDRGK1Q96HY6 314 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 P2RX7Q99572 595 aaKnown RBP13.77□□□□□ -0.21
SPEN-205ENST00000487496 FEZ1Q99689 392 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 SALL3Q9BXA9 1300 aa13.77□□□□□ -0.21
SPEN-205ENST00000487496 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
SPEN-205ENST00000487496 MPHOSPH10O00566 681 aaKnown RBP13.76□□□□□ -0.21
SPEN-205ENST00000487496 TNPO2O14787 897 aaKnown RBP13.76□□□□□ -0.21
SPEN-205ENST00000487496 IRX3P78415 501 aaPredicted RBP13.76□□□□□ -0.21
SPEN-205ENST00000487496 SEPT2Q15019 361 aa13.76□□□□□ -0.21
SPEN-205ENST00000487496 AMOTL1Q8IY63 956 aa13.76□□□□□ -0.21
SPEN-205ENST00000487496 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
SPEN-205ENST00000487496 C12orf42Q96LP6 360 aa13.76□□□□□ -0.21
SPEN-205ENST00000487496 KIAA1683Q9H0B3 1180 aa13.76□□□□□ -0.21
SPEN-205ENST00000487496 GABRQQ9UN88 632 aa13.76□□□□□ -0.21
SPEN-205ENST00000487496 MYH7P12883 1935 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 GSG1L2A8MUP6 293 aa13.75□□□□□ -0.21
SPEN-205ENST00000487496 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms