RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 GPRC5DQ9NZD1 345 aa8.95□□□□□ -0.98
SMC4-217ENST00000485867 ZNF232Q9UNY5 417 aa8.95□□□□□ -0.98
SMC4-217ENST00000485867 FAM155AB1AL88 458 aaPredicted RBP8.94□□□□□ -0.98
SMC4-217ENST00000485867 ADAM23O75077 832 aa8.94□□□□□ -0.98
SMC4-217ENST00000485867 ALDH1B1P30837 517 aa8.94□□□□□ -0.98
SMC4-217ENST00000485867 IL13P35225 146 aa8.94□□□□□ -0.98
SMC4-217ENST00000485867 CTU1Q7Z7A3 348 aaKnown RBP8.94□□□□□ -0.98
SMC4-217ENST00000485867 LARGE2Q8N3Y3 721 aa8.94□□□□□ -0.98
SMC4-217ENST00000485867 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
SMC4-217ENST00000485867 TEX13AQ9BXU3 409 aaPredicted RBP8.94□□□□□ -0.98
SMC4-217ENST00000485867 TSPAN10Q9H1Z9 355 aaPredicted RBP8.94□□□□□ -0.98
SMC4-217ENST00000485867 PGAP2Q9UHJ9 254 aa8.94□□□□□ -0.98
SMC4-217ENST00000485867 PRR12Q9ULL5 1215 aa8.94□□□□□ -0.98
SMC4-217ENST00000485867 KIAA0100Q14667 2235 aaKnown RBP8.93□□□□□ -0.98
SMC4-217ENST00000485867 M0R2N6 131 aa8.93□□□□□ -0.98
SMC4-217ENST00000485867 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
SMC4-217ENST00000485867 HUNKP57058 714 aa8.93□□□□□ -0.98
SMC4-217ENST00000485867 PSMA6P60900 246 aaKnown RBP8.93□□□□□ -0.98
SMC4-217ENST00000485867 ZNF790Q6PG37 636 aa8.93□□□□□ -0.98
SMC4-217ENST00000485867 CLEC4GQ6UXB4 293 aa8.93□□□□□ -0.98
SMC4-217ENST00000485867 NPM2Q86SE8 214 aaKnown RBP8.93□□□□□ -0.98
SMC4-217ENST00000485867 NIM1KQ8IY84 436 aa8.93□□□□□ -0.98
SMC4-217ENST00000485867 SIX5Q8N196 739 aa8.93□□□□□ -0.98
SMC4-217ENST00000485867 MDFIQ99750 246 aa8.93□□□□□ -0.98
SMC4-217ENST00000485867 TRIOBPQ9H2D6 2365 aa8.93□□□□□ -0.98
SMC4-217ENST00000485867 NUP98P52948 1817 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 RIC1Q4ADV7 1423 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 ABCC12Q96J65 1359 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 NPC1L1Q9UHC9 1359 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 PALM3A6NDB9 673 aaPredicted RBP8.92□□□□□ -0.98
SMC4-217ENST00000485867 TRPA1O75762 1119 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 DKK1O94907 266 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 MTHFSDQ2M296 383 aaKnown RBP8.92□□□□□ -0.98
SMC4-217ENST00000485867 CRY2Q49AN0 593 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 TPTE2Q6XPS3 522 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 SLC51AQ86UW1 340 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 RNF186Q9NXI6 227 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 ZNF652Q9Y2D9 606 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 CEP290O15078 2479 aa8.92□□□□□ -0.98
SMC4-217ENST00000485867 CDHR2Q9BYE9 1310 aa8.91□□□□□ -0.98
SMC4-217ENST00000485867 FAM177BA6PVY3 158 aa8.91□□□□□ -0.98
SMC4-217ENST00000485867 PIP4K2AP48426 406 aaPredicted RBP8.91□□□□□ -0.98
SMC4-217ENST00000485867 GMPSP49915 693 aaPredicted RBP8.91□□□□□ -0.98
SMC4-217ENST00000485867 KIF23Q02241 960 aaPredicted RBP8.91□□□□□ -0.98
SMC4-217ENST00000485867 C1orf53Q5VUE5 145 aa8.91□□□□□ -0.98
SMC4-217ENST00000485867 RGMBQ6NW40 437 aa8.91□□□□□ -0.98
SMC4-217ENST00000485867 CDC37L1Q7L3B6 337 aa8.91□□□□□ -0.98
SMC4-217ENST00000485867 RHPN1Q8TCX5 695 aa8.91□□□□□ -0.98
SMC4-217ENST00000485867 TRPM4Q8TD43 1214 aa8.91□□□□□ -0.98
SMC4-217ENST00000485867 FMNL2Q96PY5 1086 aa8.91□□□□□ -0.98
SMC4-217ENST00000485867 NOP53Q9NZM5 478 aaKnown RBP8.91□□□□□ -0.98
SMC4-217ENST00000485867 NIP7Q9Y221 180 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMC4-217ENST00000485867 PPIP5K2O43314 1243 aa8.9□□□□□ -0.98
SMC4-217ENST00000485867 HMOX1P09601 288 aa8.9□□□□□ -0.98
SMC4-217ENST00000485867 FXR1P51114 621 aaKnown RBP eCLIP8.9□□□□□ -0.98
SMC4-217ENST00000485867 CXCL9Q07325 125 aa8.9□□□□□ -0.98
SMC4-217ENST00000485867 SFSWAPQ12872 951 aaKnown RBP8.9□□□□□ -0.98
SMC4-217ENST00000485867 AOC3Q16853 763 aa8.9□□□□□ -0.98
SMC4-217ENST00000485867 SYT9Q86SS6 491 aa8.9□□□□□ -0.98
SMC4-217ENST00000485867 TSEN2Q8NCE0 465 aaKnown RBP8.9□□□□□ -0.98
SMC4-217ENST00000485867 CLUAP1Q96AJ1 413 aa8.9□□□□□ -0.98
SMC4-217ENST00000485867 RBBP6Q7Z6E9 1792 aaKnown RBP8.9□□□□□ -0.98
SMC4-217ENST00000485867 CUL9Q8IWT3 2517 aa8.9□□□□□ -0.99
SMC4-217ENST00000485867 ELOA3CA0A087WX78 387 aaPredicted RBP8.89□□□□□ -0.99
SMC4-217ENST00000485867 ELOA3DA6NLF2 546 aaPredicted RBP8.89□□□□□ -0.99
SMC4-217ENST00000485867 SIN3BO75182 1162 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 HOXA10P31260 410 aaPredicted RBP8.89□□□□□ -0.99
SMC4-217ENST00000485867 TEFQ10587 303 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 PKN2Q16513 984 aaKnown RBP8.89□□□□□ -0.99
SMC4-217ENST00000485867 ELOA3BQ3SY89 546 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 DLK2Q6UY11 383 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 USP48Q86UV5 1035 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 MORC1Q86VD1 984 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 IL17REQ8NFR9 667 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 ELOA3Q8NG57 546 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 TRIM11Q96F44 468 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 ZNF594Q96JF6 807 aaPredicted RBP8.89□□□□□ -0.99
SMC4-217ENST00000485867 GBA2Q9HCG7 927 aaPredicted RBP8.89□□□□□ -0.99
SMC4-217ENST00000485867 NEUROD4Q9HD90 331 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 USP16Q9Y5T5 823 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 LAMB4A4D0S4 1761 aa8.89□□□□□ -0.99
SMC4-217ENST00000485867 MKI67P46013 3256 aaKnown RBP8.88□□□□□ -0.99
SMC4-217ENST00000485867 KIF7Q2M1P5 1343 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 SHTN1A0MZ66 631 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 SFI1A8K8P3 1242 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 C1QTNF9BB2RNN3 333 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 KCNQ3O43525 872 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 ZNF157P51786 506 aaPredicted RBP8.88□□□□□ -0.99
SMC4-217ENST00000485867 CD163Q86VB7 1156 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 GLMNQ92990 594 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 CSRNP1Q96S65 589 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 SLC30A3Q99726 388 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 PHACTR1Q9C0D0 580 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 ZNRF3Q9ULT6 936 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 HCN4Q9Y3Q4 1203 aa8.88□□□□□ -0.99
SMC4-217ENST00000485867 LAMB2P55268 1798 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 PAPPA2Q9BXP8 1791 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 PRAMEF22A3QJZ6 481 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 ADARB2-AS1A8MUL3 147 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 CHRNA4P43681 627 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms