RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 AMPD3Q01432 767 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 FBXO18Q8NFZ0 1043 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-218ENST00000482171 USP40Q9NVE5 1235 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 ZSWIM5Q9P217 1185 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 ELP1O95163 1332 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 BTDP43251 543 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 GTF2A1P52655 376 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-218ENST00000482171 RABL6Q3YEC7 729 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-218ENST00000482171 CCDC40Q4G0X9 1142 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 ATL3Q6DD88 541 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 GJA3Q9Y6H8 435 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 AFF2P51816 1311 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 SYCP1Q15431 976 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 TDRD12Q587J7 1177 aaKnown RBP12.79□□□□□ -0.36
SMPD4-218ENST00000482171 CLIC6Q96NY7 704 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 TSG101Q99816 390 aa12.79□□□□□ -0.36
SMPD4-218ENST00000482171 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 TTC38Q5R3I4 469 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 FCHSD1Q86WN1 690 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 CLIC4Q9Y696 253 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 SOS2Q07890 1332 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-218ENST00000482171 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 TNIP1Q15025 636 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 KRBA2Q6ZNG9 492 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 PNMA1Q8ND90 353 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 NRBP1Q9UHY1 535 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 MEGF6O75095 1541 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 PRDX5P30044 214 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 COL15A1P39059 1388 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-218ENST00000482171 UTP14CQ5TAP6 766 aaKnown RBP12.78□□□□□ -0.36
SMPD4-218ENST00000482171 IQUBQ8NA54 791 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 PXDNQ92626 1479 aa12.78□□□□□ -0.36
SMPD4-218ENST00000482171 GPKOWQ92917 476 aaPredicted RBP eCLIP12.78□□□□□ -0.36
SMPD4-218ENST00000482171 PPIP5K2O43314 1243 aa12.77□□□□□ -0.36
SMPD4-218ENST00000482171 MATR3P43243 847 aaKnown RBP eCLIP12.77□□□□□ -0.36
SMPD4-218ENST00000482171 EVCP57679 992 aa12.77□□□□□ -0.36
SMPD4-218ENST00000482171 TAF6LQ9Y6J9 622 aa12.77□□□□□ -0.36
SMPD4-218ENST00000482171 ADGRB2O60241 1585 aa12.77□□□□□ -0.36
SMPD4-218ENST00000482171 ZMYM6O95789 1325 aa12.77□□□□□ -0.36
SMPD4-218ENST00000482171 ARID4AP29374 1257 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-218ENST00000482171 KARSQ15046 597 aaKnown RBP12.77□□□□□ -0.37
SMPD4-218ENST00000482171 LRRC47Q8N1G4 583 aaKnown RBP12.77□□□□□ -0.37
SMPD4-218ENST00000482171 KIAA1524Q8TCG1 905 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
SMPD4-218ENST00000482171 STRBPQ96SI9 672 aaKnown RBP12.77□□□□□ -0.37
SMPD4-218ENST00000482171 VPS18Q9P253 973 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-218ENST00000482171 FER1L4A9Z1Z3 1794 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 SHTN1A0MZ66 631 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 GOLGA6L9A6NEM1 432 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 SPDYE3A6NKU9 549 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-218ENST00000482171 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 TXKP42681 527 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-218ENST00000482171 C2CD5Q86YS7 1000 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 PCDHA7Q9UN72 937 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 XDHP47989 1333 aa12.77□□□□□ -0.37
SMPD4-218ENST00000482171 ATP2B4P23634 1241 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 TBC1D22AQ8WUA7 517 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 CARD6Q9BX69 1037 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 RASSF4Q9H2L5 321 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 MMRN2Q9H8L6 949 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 DBNDD1Q9H9R9 158 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 PKD2L1Q9P0L9 805 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 PUF60Q9UHX1 559 aaKnown RBP12.76□□□□□ -0.37
SMPD4-218ENST00000482171 MINPP1Q9UNW1 487 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 KRT79Q5XKE5 535 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 DYNLL2Q96FJ2 89 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 ERCC3P19447 782 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 ALDH1B1P30837 517 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 SLC1A4P43007 532 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 MNAT1P51948 309 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 TRIM28Q13263 835 aaKnown RBP12.76□□□□□ -0.37
SMPD4-218ENST00000482171 ODF2Q5BJF6 829 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 CLEC4GQ6UXB4 293 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 MED23Q9ULK4 1368 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 FRMPD2Q68DX3 1309 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-218ENST00000482171 CCNT1O60563 726 aaKnown RBP12.76□□□□□ -0.37
SMPD4-218ENST00000482171 PFKFB1P16118 471 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 POLD1P28340 1107 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 MAP9Q49MG5 647 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 NOSTRINQ8IVI9 506 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 TRMT44Q8IYL2 757 aaKnown RBP12.76□□□□□ -0.37
SMPD4-218ENST00000482171 NLGN1Q8N2Q7 840 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 SRRTQ9BXP5 876 aaKnown RBP12.76□□□□□ -0.37
SMPD4-218ENST00000482171 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
SMPD4-218ENST00000482171 CARMIL3Q8ND23 1372 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 KIF20BQ96Q89 1820 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 GOLGA6L10A6NI86 522 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 PSMA7O14818 248 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 TRIM21P19474 475 aaKnown RBP12.75□□□□□ -0.37
SMPD4-218ENST00000482171 PNOCQ13519 176 aa12.75□□□□□ -0.37
SMPD4-218ENST00000482171 ITPK1Q13572 414 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms