RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 MCM10Q7L590 875 aa8.68□□□□□ -1.02
CTNNB1-213ENST00000482042 WDR63Q8IWG1 891 aa8.68□□□□□ -1.02
CTNNB1-213ENST00000482042 TRPM4Q8TD43 1214 aa8.68□□□□□ -1.02
CTNNB1-213ENST00000482042 MKNK1Q9BUB5 465 aa8.68□□□□□ -1.02
CTNNB1-213ENST00000482042 TEX13AQ9BXU3 409 aaPredicted RBP8.68□□□□□ -1.02
CTNNB1-213ENST00000482042 IGFLR1Q9H665 355 aa8.68□□□□□ -1.02
CTNNB1-213ENST00000482042 C4AP0C0L4 1744 aa8.68□□□□□ -1.02
CTNNB1-213ENST00000482042 TARSP26639 723 aaKnown RBP8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 GPLD1P80108 840 aa8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 ZNF790Q6PG37 636 aa8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 DHX32Q7L7V1 743 aaKnown RBP8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 FMNL2Q96PY5 1086 aa8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 USP20Q9Y2K6 914 aa8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 RRP7AQ9Y3A4 280 aaKnown RBP8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 KCNMB2Q9Y691 235 aa8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 NUP98P52948 1817 aa8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 ANKRD36CQ5JPF3 1778 aa8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 BCORQ6W2J9 1755 aa8.67□□□□□ -1.02
CTNNB1-213ENST00000482042 SASH3O75995 380 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 RARAP10276 462 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 DCTN1Q14203 1278 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 TXNRD1Q16881 649 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 FAM26DQ5JW98 314 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 PSAPL1Q6NUJ1 521 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 KRT25Q7Z3Z0 450 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 RGL4Q8IZJ4 473 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 CAMKK2Q96RR4 588 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 C1orf115Q9H7X2 142 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 JPH1Q9HDC5 661 aaPredicted RBP8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 ATG3Q9NT62 314 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 IFT57Q9NWB7 429 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 TSPYL4Q9UJ04 414 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 CCNL1Q9UK58 526 aaPredicted RBP8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 SOS1Q07889 1333 aaPredicted RBP8.66□□□□□ -1.02
CTNNB1-213ENST00000482042 XYLBO75191 536 aa8.65□□□□□ -1.02
CTNNB1-213ENST00000482042 ATP2B4P23634 1241 aa8.65□□□□□ -1.02
CTNNB1-213ENST00000482042 FRRS1LQ9P0K9 344 aa8.65□□□□□ -1.02
CTNNB1-213ENST00000482042 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
CTNNB1-213ENST00000482042 HEG1Q9ULI3 1381 aa8.65□□□□□ -1.02
CTNNB1-213ENST00000482042 CASZ1Q86V15 1759 aa8.65□□□□□ -1.03
CTNNB1-213ENST00000482042 LOC102724428A0A0B4J2F2 783 aa8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 ZBTB42B2RXF5 422 aa8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 AFF1P51825 1210 aaKnown RBP8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 NRLP54845 237 aa8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 SIK1P57059 783 aa8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 EZH2Q15910 746 aaKnown RBP8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 CMTR1Q8N1G2 835 aaKnown RBP8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 NUDT8Q8WV74 236 aa8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 LPIN3Q9BQK8 851 aa8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 MYH16Q9H6N6 1097 aa8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 LAS1LQ9Y4W2 734 aaKnown RBP8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 AFDNP55196 1824 aaKnown RBP8.64□□□□□ -1.03
CTNNB1-213ENST00000482042 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 CHL1O00533 1208 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 ADAM23O75077 832 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 RGS9O75916 674 aaPredicted RBP8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 HOXB7P09629 217 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 SNRPA1P09661 255 aaKnown RBP8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 HOXD8P13378 290 aaPredicted RBP8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 TRIM28Q13263 835 aaKnown RBP8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 NAA30Q147X3 362 aaPredicted RBP8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 DEFB132Q7Z7B7 95 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 FLAD1Q8NFF5 587 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 STK32BQ9NY57 414 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 TLR7Q9NYK1 1049 aaKnown RBP8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 SCN7AQ01118 1682 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 ARFGEF2Q9Y6D5 1785 aa8.63□□□□□ -1.03
CTNNB1-213ENST00000482042 E9PSI1 815 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 STARD3NLO95772 234 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 ZNF853P0CG23 659 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 CPB1P15086 417 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 ARID4AP29374 1257 aaPredicted RBP8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 SLC39A6Q13433 755 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 TRIP4Q15650 581 aaPredicted RBP8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 PERM1Q5SV97 790 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 PTF1AQ7RTS3 328 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 FAM13BQ9NYF5 915 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 ZBED9Q6R2W3 1325 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 CNTNAP4Q9C0A0 1308 aa8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 N4BP2Q86UW6 1770 aaPredicted RBP8.62□□□□□ -1.03
CTNNB1-213ENST00000482042 SOX18P35713 384 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 EIF4A1P60842 406 aaKnown RBP8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 TRAPPC3LQ5T215 181 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 TTC9Q92623 222 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 NACC1Q96RE7 527 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 THUMPD2Q9BTF0 503 aaKnown RBP8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 STIM2Q9P246 746 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 ZNF521Q96K83 1311 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 A0A0A0MRY4 1105 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 TMEM88BA6NKF7 163 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 GRIK5Q16478 980 aa8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
CTNNB1-213ENST00000482042 MMP20O60882 483 aa8.6□□□□□ -1.03
CTNNB1-213ENST00000482042 ELNP15502 786 aa8.6□□□□□ -1.03
CTNNB1-213ENST00000482042 ZAP70P43403 619 aa8.6□□□□□ -1.03
CTNNB1-213ENST00000482042 GATA4P43694 442 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms