RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CCDC102BQ68D86 513 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 INTS3Q68E01 1043 aaKnown RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 FOXR1Q6PIV2 292 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 G2E3Q7L622 706 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 SIX5Q8N196 739 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 LARGE2Q8N3Y3 721 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 TPCN2Q8NHX9 752 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 JDP2Q8WYK2 163 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 DPF2Q92785 391 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 GTPBP3Q969Y2 492 aaKnown RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 DNAAF2Q9NVR5 837 aaKnown RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 RNF181Q9P0P0 153 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 USP3Q9Y6I4 520 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 VIRMAQ69YN4 1812 aaKnown RBP6.17□□□□□ -1.42
PTCD3-213ENST00000480102 ARFGEF1Q9Y6D6 1849 aa6.17□□□□□ -1.42
PTCD3-213ENST00000480102 GPR25O00155 361 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 IGSF3O75054 1194 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 SLURP2P0DP57 97 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 ATP4AP20648 1035 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 C1QTNF8P60827 252 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 FOXO4P98177 505 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 MTX1Q13505 466 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 LBRQ14739 615 aaKnown RBP6.16□□□□□ -1.42
PTCD3-213ENST00000480102 DPP8Q6V1X1 898 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-213ENST00000480102 PODNQ7Z5L7 613 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 PNMA8AQ86V59 439 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-213ENST00000480102 SYNE4Q8N205 404 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 PGBD3Q8N328 593 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 C1orf216Q8TAB5 229 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 EYA3Q99504 573 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 ANKRD2Q9GZV1 360 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 RUBCNLQ9H714 662 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 SCHIP1Q9P0W5 487 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-213ENST00000480102 LEMD3Q9Y2U8 911 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 XDHP47989 1333 aa6.16□□□□□ -1.42
PTCD3-213ENST00000480102 M0R2N6 131 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 ATP2B4P23634 1241 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 FOXK2Q01167 660 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 CWF19L2Q2TBE0 894 aaKnown RBP6.15□□□□□ -1.42
PTCD3-213ENST00000480102 ATF7IPQ6VMQ6 1270 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 UBE3BQ7Z3V4 1068 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 ANKRD18AQ8IVF6 992 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 CELF1Q92879 486 aaKnown RBP6.15□□□□□ -1.42
PTCD3-213ENST00000480102 ZNF594Q96JF6 807 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-213ENST00000480102 TRERF1Q96PN7 1200 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 USP44Q9H0E7 712 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 CRISPLD1Q9H336 500 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 SMC4Q9NTJ3 1288 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 PGAP2Q9UHJ9 254 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 ZNRF3Q9ULT6 936 aa6.15□□□□□ -1.42
PTCD3-213ENST00000480102 AFDNP55196 1824 aaKnown RBP6.15□□□□□ -1.43
PTCD3-213ENST00000480102 MED23Q9ULK4 1368 aa6.15□□□□□ -1.43
PTCD3-213ENST00000480102 ARFGEF2Q9Y6D5 1785 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 FAM177BA6PVY3 158 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 DKK1O94907 266 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 GNAI3P08754 354 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 RASA1P20936 1047 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 IGHMBP2P38935 993 aaKnown RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 EIF6P56537 245 aaKnown RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 FKBP1AP62942 108 aaKnown RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 RASSF7Q02833 373 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 SRSF11Q05519 484 aaKnown RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 IFIT5Q13325 482 aaKnown RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 UBAP2LQ14157 1087 aaKnown RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 TNIP1Q15025 636 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 EFHC2Q5JST6 749 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 USP50Q70EL3 339 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 SMC1BQ8NDV3 1235 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 TBC1D16Q8TBP0 767 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 GREM2Q9H772 168 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 ZNF277Q9NRM2 450 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 C9orf78Q9NZ63 289 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-213ENST00000480102 GGA1Q9UJY5 639 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 MINPP1Q9UNW1 487 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 MYO3BQ8WXR4 1341 aa6.14□□□□□ -1.43
PTCD3-213ENST00000480102 ANKRD31Q8N7Z5 1873 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 ANKRD18BA2A2Z9 1011 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 PPIP5K2O43314 1243 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 CIAO1O76071 339 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 VIL1P09327 827 aaKnown RBP6.13□□□□□ -1.43
PTCD3-213ENST00000480102 LMOD1P29536 600 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-213ENST00000480102 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTCD3-213ENST00000480102 UBE4AQ14139 1066 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 LDHDQ86WU2 507 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 SLC9A9Q8IVB4 645 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 NIM1KQ8IY84 436 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 TNS4Q8IZW8 715 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 AGBL3Q8NEM8 1001 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 ZDHHC1Q8WTX9 485 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 AIDAQ96BJ3 306 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 KAZALD1Q96I82 304 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 ZC3H12CQ9C0D7 883 aaKnown RBP6.13□□□□□ -1.43
PTCD3-213ENST00000480102 COA1Q9GZY4 146 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 CHMP4BQ9H444 224 aaKnown RBP6.13□□□□□ -1.43
PTCD3-213ENST00000480102 ZDHHC3Q9NYG2 299 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 POLLQ9UGP5 575 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 NSFL1CQ9UNZ2 370 aaKnown RBP6.13□□□□□ -1.43
PTCD3-213ENST00000480102 MROH5Q6ZUA9 1318 aa6.13□□□□□ -1.43
PTCD3-213ENST00000480102 TNRC6CQ9HCJ0 1690 aaKnown RBP6.13□□□□□ -1.43
PTCD3-213ENST00000480102 LRRC37AA6NMS7 1700 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms