RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FAM109BQ6ICB4 259 aaPredicted RBP19.84■□□□□ 0.77
DDX56-210ENST00000479440 GPR142Q7Z601 462 aa19.84■□□□□ 0.77
DDX56-210ENST00000479440 P2RX7Q99572 595 aaKnown RBP19.84■□□□□ 0.77
DDX56-210ENST00000479440 API5Q9BZZ5 524 aaKnown RBP19.84■□□□□ 0.77
DDX56-210ENST00000479440 USP17L10C9JJH3 530 aa19.83■□□□□ 0.77
DDX56-210ENST00000479440 PLCG2P16885 1265 aa19.83■□□□□ 0.77
DDX56-210ENST00000479440 CCND3P30281 292 aaPredicted RBP19.83■□□□□ 0.77
DDX56-210ENST00000479440 LHX8Q68G74 356 aa19.83■□□□□ 0.77
DDX56-210ENST00000479440 PLEKHH3Q7Z736 793 aa19.83■□□□□ 0.77
DDX56-210ENST00000479440 NEUROD6Q96NK8 337 aa19.83■□□□□ 0.77
DDX56-210ENST00000479440 LBHD1Q9BQE6 289 aaPredicted RBP19.83■□□□□ 0.77
DDX56-210ENST00000479440 PAGR1Q9BTK6 254 aa19.83■□□□□ 0.77
DDX56-210ENST00000479440 SIPA1L1O43166 1804 aa19.83■□□□□ 0.76
DDX56-210ENST00000479440 SRGAP3O43295 1099 aa19.82■□□□□ 0.76
DDX56-210ENST00000479440 BAG3O95817 575 aa19.82■□□□□ 0.76
DDX56-210ENST00000479440 ARID4AP29374 1257 aaPredicted RBP19.82■□□□□ 0.76
DDX56-210ENST00000479440 PI16Q6UXB8 463 aa19.82■□□□□ 0.76
DDX56-210ENST00000479440 CRACR2BQ8N4Y2 399 aaPredicted RBP19.82■□□□□ 0.76
DDX56-210ENST00000479440 SH3RF3Q8TEJ3 882 aaPredicted RBP19.82■□□□□ 0.76
DDX56-210ENST00000479440 USP6NLQ92738 828 aa19.82■□□□□ 0.76
DDX56-210ENST00000479440 FRMPD3Q5JV73 1810 aa19.81■□□□□ 0.76
DDX56-210ENST00000479440 CCL14Q16627 93 aa19.81■□□□□ 0.76
DDX56-210ENST00000479440 MORN1Q5T089 497 aa19.81■□□□□ 0.76
DDX56-210ENST00000479440 TBC1D9Q6ZT07 1266 aa19.81■□□□□ 0.76
DDX56-210ENST00000479440 MEIS3Q99687 375 aa19.81■□□□□ 0.76
DDX56-210ENST00000479440 PORCNQ9H237 461 aa19.81■□□□□ 0.76
DDX56-210ENST00000479440 LRP2BPQ9P2M1 347 aa19.81■□□□□ 0.76
DDX56-210ENST00000479440 RBPJLQ9UBG7 517 aa19.81■□□□□ 0.76
DDX56-210ENST00000479440 MSCO60682 206 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 PEX10O60683 326 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 GLRX3O76003 335 aaKnown RBP19.8■□□□□ 0.76
DDX56-210ENST00000479440 UQCRFS1P1P0C7P4 283 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 SLFN5Q08AF3 891 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 ZNF697Q5TEC3 545 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 MFSD14CQ5VZR4 134 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 GUCD1Q96NT3 240 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 PRKAG2Q9UGJ0 569 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 ZBTB21Q9ULJ3 1066 aa19.8■□□□□ 0.76
DDX56-210ENST00000479440 NOB1Q9ULX3 412 aaKnown RBP19.8■□□□□ 0.76
DDX56-210ENST00000479440 FLT1P17948 1338 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 POTEB2H3BUK9 544 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 GDF11O95390 407 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 HLA-DOAP06340 250 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 GNAI3P08754 354 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 CCNA1P78396 465 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 MAP2K5Q13163 448 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 MTX1Q13505 466 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 NAA16Q6N069 864 aaPredicted RBP19.79■□□□□ 0.76
DDX56-210ENST00000479440 DNAJC18Q9H819 358 aa19.79■□□□□ 0.76
DDX56-210ENST00000479440 AATFQ9NY61 560 aaKnown RBP eCLIP19.79■□□□□ 0.76
DDX56-210ENST00000479440 MCAMP43121 646 aa19.78■□□□□ 0.76
DDX56-210ENST00000479440 Q3C1V9 767 aa19.78■□□□□ 0.76
DDX56-210ENST00000479440 USP17L2Q6R6M4 530 aa19.78■□□□□ 0.76
DDX56-210ENST00000479440 ATF7IPQ6VMQ6 1270 aa19.78■□□□□ 0.76
DDX56-210ENST00000479440 METTL16Q86W50 562 aaKnown RBP19.78■□□□□ 0.76
DDX56-210ENST00000479440 FOXP4Q8IVH2 680 aaPredicted RBP19.78■□□□□ 0.76
DDX56-210ENST00000479440 MAPKAPK5Q8IW41 473 aa19.78■□□□□ 0.76
DDX56-210ENST00000479440 SENP6Q9GZR1 1112 aaPredicted RBP19.78■□□□□ 0.76
DDX56-210ENST00000479440 CT47B1P0C2W7 299 aaPredicted RBP19.77■□□□□ 0.76
DDX56-210ENST00000479440 TGFBRAP1Q8WUH2 860 aa19.77■□□□□ 0.76
DDX56-210ENST00000479440 EDC3Q96F86 508 aaKnown RBP19.77■□□□□ 0.76
DDX56-210ENST00000479440 FAM161BQ96MY7 647 aa19.77■□□□□ 0.76
DDX56-210ENST00000479440 FEZ1Q99689 392 aa19.77■□□□□ 0.76
DDX56-210ENST00000479440 DDX20Q9UHI6 824 aaKnown RBP19.77■□□□□ 0.76
DDX56-210ENST00000479440 RABGAP1Q9Y3P9 1069 aa19.77■□□□□ 0.76
DDX56-210ENST00000479440 CUL9Q8IWT3 2517 aa19.77■□□□□ 0.76
DDX56-210ENST00000479440 FOCADQ5VW36 1801 aa19.76■□□□□ 0.75
DDX56-210ENST00000479440 DNM1LO00429 736 aa19.76■□□□□ 0.75
DDX56-210ENST00000479440 LPAR1Q92633 364 aa19.76■□□□□ 0.75
DDX56-210ENST00000479440 C12orf42Q96LP6 360 aa19.76■□□□□ 0.75
DDX56-210ENST00000479440 A0A0C4DFX4 3053 aa19.76■□□□□ 0.75
DDX56-210ENST00000479440 JAG1P78504 1218 aa19.75■□□□□ 0.75
DDX56-210ENST00000479440 WDR78Q5VTH9 848 aa19.75■□□□□ 0.75
DDX56-210ENST00000479440 EMILIN3Q9NT22 766 aa19.75■□□□□ 0.75
DDX56-210ENST00000479440 IVNS1ABPQ9Y6Y0 642 aa19.75■□□□□ 0.75
DDX56-210ENST00000479440 LTBP2Q14767 1821 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 SLC15A5A6NIM6 579 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L15C9J2P7 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L13C9JLJ4 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L11C9JVI0 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L18D6R9N7 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L22D6RA61 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L17D6RBQ6 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L19D6RCP7 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L20D6RJB6 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 IGSF3O75054 1194 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 CNGA1P29973 690 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 ATN1P54259 1190 aaPredicted RBP19.74■□□□□ 0.75
DDX56-210ENST00000479440 PPP4CP60510 307 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP17L24Q0WX57 530 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 SHROOM1Q2M3G4 852 aaPredicted RBP19.74■□□□□ 0.75
DDX56-210ENST00000479440 PALD1Q9ULE6 856 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.74■□□□□ 0.75
DDX56-210ENST00000479440 UNC80Q8N2C7 3258 aa19.74■□□□□ 0.75
DDX56-210ENST00000479440 USP14P54578 494 aa19.73■□□□□ 0.75
DDX56-210ENST00000479440 RTP1P59025 263 aa19.73■□□□□ 0.75
DDX56-210ENST00000479440 ATP2B2Q01814 1243 aa19.73■□□□□ 0.75
DDX56-210ENST00000479440 G3BP1Q13283 466 aaKnown RBP eCLIP19.73■□□□□ 0.75
DDX56-210ENST00000479440 ZYXQ15942 572 aaKnown RBP19.73■□□□□ 0.75
DDX56-210ENST00000479440 TTC39AQ5SRH9 613 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms