RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 CFLARO15519 480 aa12.16□□□□□ -0.46
EWSR1-216ENST00000479135 KRT75O95678 551 aa12.16□□□□□ -0.46
EWSR1-216ENST00000479135 ESRRGP62508 458 aa12.16□□□□□ -0.46
EWSR1-216ENST00000479135 TAF7Q15545 349 aaPredicted RBP12.16□□□□□ -0.46
EWSR1-216ENST00000479135 SNCBQ16143 134 aa12.16□□□□□ -0.46
EWSR1-216ENST00000479135 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
EWSR1-216ENST00000479135 SLC44A4Q53GD3 710 aa12.16□□□□□ -0.46
EWSR1-216ENST00000479135 SH3GL1Q99961 368 aa12.16□□□□□ -0.46
EWSR1-216ENST00000479135 KRT86O43790 486 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 NEMFO60524 1076 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 OAS2P29728 719 aaKnown RBP12.15□□□□□ -0.46
EWSR1-216ENST00000479135 BEND3Q5T5X7 828 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ZNF653Q96CK0 615 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 OGFRQ9NZT2 677 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 TRIM14Q14142 442 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 WDR75Q8IWA0 830 aaKnown RBP12.15□□□□□ -0.46
EWSR1-216ENST00000479135 TMC2Q8TDI7 906 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 PHAXQ9H814 394 aaKnown RBP12.15□□□□□ -0.46
EWSR1-216ENST00000479135 EXOC6BQ9Y2D4 811 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 PARP3Q9Y6F1 533 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 SYNJ2BP-COX16A0A087WUM0 186 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 GOLGA8QA0A0J9YX86 632 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 GOLGA8OA6NCC3 632 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 GOLGA8NF8WBI6 632 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ABHD8Q96I13 439 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 PRIMPOLQ96LW4 560 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 OSBPL10Q9BXB5 764 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 PLCB1Q9NQ66 1216 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 COX16Q9P0S2 106 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ARF4P18085 180 aaPredicted RBP12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ARFGAP2Q8N6H7 521 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 P3H4Q92791 437 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 CCDC8Q9H0W5 538 aaPredicted RBP12.15□□□□□ -0.46
EWSR1-216ENST00000479135 SYKP43405 635 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 SLC8A3P57103 927 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ANKRD20A4Q4UJ75 823 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ANKRD20A8PQ5CZ79 823 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
EWSR1-216ENST00000479135 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
EWSR1-216ENST00000479135 CEP104O60308 925 aa12.15□□□□□ -0.47
EWSR1-216ENST00000479135 HMGB1P09429 215 aaKnown RBP12.15□□□□□ -0.47
EWSR1-216ENST00000479135 TRIM32Q13049 653 aa12.15□□□□□ -0.47
EWSR1-216ENST00000479135 C8orf74Q6P047 294 aa12.15□□□□□ -0.47
EWSR1-216ENST00000479135 C11orf88Q6PI97 169 aa12.15□□□□□ -0.47
EWSR1-216ENST00000479135 HEATR4Q86WZ0 1026 aa12.15□□□□□ -0.47
EWSR1-216ENST00000479135 IQCDQ96DY2 449 aa12.15□□□□□ -0.47
EWSR1-216ENST00000479135 NDEL1Q9GZM8 345 aa12.15□□□□□ -0.47
EWSR1-216ENST00000479135 COPG1Q9Y678 874 aaKnown RBP12.15□□□□□ -0.47
EWSR1-216ENST00000479135 FYCO1Q9BQS8 1478 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 TNPO1Q92973 898 aaKnown RBP12.14□□□□□ -0.47
EWSR1-216ENST00000479135 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 ENO4A6NNW6 628 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 HOOK2Q96ED9 719 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 CDC40O60508 579 aaKnown RBP eCLIP12.14□□□□□ -0.47
EWSR1-216ENST00000479135 DMPKQ09013 629 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
EWSR1-216ENST00000479135 GOLGA5Q8TBA6 731 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 SYCE1LA8MT33 242 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 THAP12O43422 761 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 DKC1O60832 514 aaKnown RBP eCLIP12.14□□□□□ -0.47
EWSR1-216ENST00000479135 MIS18AQ9NYP9 233 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 ZPR1O75312 459 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
EWSR1-216ENST00000479135 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
EWSR1-216ENST00000479135 PDHA1P08559 390 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 ANO4Q32M45 955 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 RAPH1Q70E73 1250 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 KAT14Q9H8E8 782 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 STMN3Q9NZ72 180 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 CNPY2Q9Y2B0 182 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 RASSF10A6NK89 507 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 ECE1P42892 770 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 KRT74Q7RTS7 529 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 NECAB1Q8N987 351 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 KRT12Q99456 494 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 TLK1Q9UKI8 766 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 ARF5P84085 180 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 LAMC2Q13753 1193 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 TWISTNBQ3B726 338 aaPredicted RBP12.13□□□□□ -0.47
EWSR1-216ENST00000479135 HDGFL1Q5TGJ6 251 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 ARHGEF3Q9NR81 526 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.13□□□□□ -0.47
EWSR1-216ENST00000479135 NUP155O75694 1391 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 TROVE2P10155 538 aaKnown RBP eCLIP12.13□□□□□ -0.47
EWSR1-216ENST00000479135 MLH1P40692 756 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 IRX4P78413 519 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
EWSR1-216ENST00000479135 ENOX1Q8TC92 643 aaKnown RBP12.13□□□□□ -0.47
EWSR1-216ENST00000479135 CAB39Q9Y376 341 aaPredicted RBP12.13□□□□□ -0.47
EWSR1-216ENST00000479135 SBNO2Q9Y2G9 1366 aa12.13□□□□□ -0.47
EWSR1-216ENST00000479135 MCF2P10911 925 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 450.4 ms