RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ANO5Q75V66 913 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 UTS2BQ765I0 119 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 PNMA8AQ86V59 439 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 TBC1D22AQ8WUA7 517 aa5.99□□□□□ -1.45
USF3-202ENST00000478658 TRIM6Q9C030 488 aaPredicted RBP5.99□□□□□ -1.45
USF3-202ENST00000478658 CCDC130P13994 396 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 KRR1Q13601 381 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 PPP1R21Q6ZMI0 780 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 SRPK1Q96SB4 655 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 SUCLA2Q9P2R7 463 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 APOA4P06727 396 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 CA4P22748 312 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 DNM2P50570 870 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 MKRN3Q13064 507 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 PDE1CQ14123 709 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 RSBN1LQ6PCB5 846 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 PACSIN1Q9BY11 444 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 SERPINA10Q9UK55 444 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 PSMD14O00487 310 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 IFIT3O14879 490 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 LCA5LO95447 670 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 APOEP02649 317 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 NUTM2DQ5VT03 806 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 NUTM2AQ8IVF1 878 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 FBXO18Q8NFZ0 1043 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 GPBP1L1Q9HC44 474 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 SUFUQ9UMX1 484 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 ATP8A1Q9Y2Q0 1164 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 NUB1Q9Y5A7 615 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 HSPA1AP0DMV8 641 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 HSPA1BP0DMV9 641 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 IRX3P78415 501 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 MICALL2Q8IY33 904 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 ZNF713Q8N859 430 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 ATP11CQ8NB49 1132 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 SLC12A6Q9UHW9 1150 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 DHX29Q7Z478 1369 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 EIF3BP55884 814 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 ZNF544Q6NX49 715 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 CENPSQ8N2Z9 138 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 GRK7Q8WTQ7 553 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 TYW1Q9NV66 732 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 ANKIB1Q9P2G1 1089 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 ARHGAP26Q9UNA1 814 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 DIS3Q9Y2L1 958 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 TROVE2P10155 538 aaKnown RBP eCLIP5.98□□□□□ -1.45
USF3-202ENST00000478658 PAX3P23760 479 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 GOLGA8FQ08AF8 430 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 GOLGA8DPQ0D2H9 430 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 XPO6Q96QU8 1125 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 DHX36Q9H2U1 1008 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 CCDC177Q9NQR7 707 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 H2AFY2Q9P0M6 372 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 MYH11P35749 1972 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 KRT16P08779 473 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 EEF2P13639 858 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 POLD1P28340 1107 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 ENAHQ8N8S7 591 aaPredicted RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 BCAS4Q8TDM0 211 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 PPP2R3CQ969Q6 453 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 ZFP42Q96MM3 310 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 CDC5LQ99459 802 aaKnown RBP5.98□□□□□ -1.45
USF3-202ENST00000478658 CNNM2Q9H8M5 875 aa5.98□□□□□ -1.45
USF3-202ENST00000478658 ZEB2O60315 1214 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 MAN1A1P33908 653 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 SAFB2Q14151 953 aaKnown RBP eCLIP5.97□□□□□ -1.45
USF3-202ENST00000478658 RCN2Q14257 317 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 SECISBP2LQ93073 1101 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 BRIP1Q9BX63 1249 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 PDS5BQ9NTI5 1447 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 ARHGAP10A1A4S6 786 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 TMEM232C9JQI7 657 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 ESRRBO95718 433 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 ADCY8P40145 1251 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 LARP1BQ659C4 914 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 SPDYE1Q8NFV5 336 aaPredicted RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 LTV1Q96GA3 475 aaPredicted RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 TSSK1BQ9BXA7 367 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 FHOD3Q2V2M9 1422 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 IQCA1LA6NCM1 817 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 TMEM191CA6NGB0 347 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 XPOTO43592 962 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 TMEM191BP0C7N4 346 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 HARSP12081 509 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 MCMDC2Q4G0Z9 681 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 TEDDM1Q5T9Z0 273 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 TCERG1LQ5VWI1 586 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 SHQ1Q6PI26 577 aaKnown RBP5.97□□□□□ -1.45
USF3-202ENST00000478658 ANKS3Q6ZW76 656 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 FAM76AQ8TAV0 307 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 DDI1Q8WTU0 396 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 PPP1R13BQ96KQ4 1090 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 SPDYE3A6NKU9 549 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 H3BUI4 141 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 MPOP05164 745 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 IQCB1Q15051 598 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 NFE2L2Q16236 605 aa5.97□□□□□ -1.45
USF3-202ENST00000478658 CEP55Q53EZ4 464 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms