RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 USP17L21D6R901 530 aa18.73■□□□□ 0.59
HMGA1-206ENST00000478214 SMIM22K7EJ46 135 aa18.73■□□□□ 0.59
HMGA1-206ENST00000478214 GPAA1O43292 621 aa18.73■□□□□ 0.59
HMGA1-206ENST00000478214 SHMT1P34896 483 aa18.73■□□□□ 0.59
HMGA1-206ENST00000478214 ZMYM1Q5SVZ6 1142 aa18.73■□□□□ 0.59
HMGA1-206ENST00000478214 GPAT2Q6NUI2 795 aa18.73■□□□□ 0.59
HMGA1-206ENST00000478214 GADL1Q6ZQY3 521 aa18.73■□□□□ 0.59
HMGA1-206ENST00000478214 EVI5LQ96CN4 794 aa18.73■□□□□ 0.59
HMGA1-206ENST00000478214 NAV1Q8NEY1 1877 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 GSG1L2A8MUP6 293 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 PDHXO00330 501 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 GH2P01242 217 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 DGKZQ13574 1117 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
HMGA1-206ENST00000478214 FASTKD5Q7L8L6 764 aaKnown RBP18.72■□□□□ 0.59
HMGA1-206ENST00000478214 SLC44A5Q8NCS7 719 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 DYNLL2Q96FJ2 89 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 DDRGK1Q96HY6 314 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 TBC1D2Q9BYX2 928 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 MCOLN1Q9GZU1 580 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 GINM1Q9NU53 330 aa18.72■□□□□ 0.59
HMGA1-206ENST00000478214 C12orf60Q5U649 245 aa18.71■□□□□ 0.59
HMGA1-206ENST00000478214 CTR9Q6PD62 1173 aa18.71■□□□□ 0.59
HMGA1-206ENST00000478214 CTU1Q7Z7A3 348 aaKnown RBP18.71■□□□□ 0.59
HMGA1-206ENST00000478214 WDR18Q9BV38 432 aa18.71■□□□□ 0.59
HMGA1-206ENST00000478214 OSBPL3Q9H4L5 887 aa18.71■□□□□ 0.59
HMGA1-206ENST00000478214 AS3MTQ9HBK9 375 aa18.71■□□□□ 0.59
HMGA1-206ENST00000478214 ABCB5Q2M3G0 1257 aa18.7■□□□□ 0.58
HMGA1-206ENST00000478214 EPB41L4AQ9HCS5 686 aaPredicted RBP18.7■□□□□ 0.58
HMGA1-206ENST00000478214 PHIPQ8WWQ0 1821 aa18.7■□□□□ 0.58
HMGA1-206ENST00000478214 TRIM6-TRIM34B2RNG4 842 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 TLR2O60603 784 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 GNAT2P19087 354 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 PDE4AP27815 886 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 HMGCS2P54868 508 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 SP3Q02447 781 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 GIMAP6Q6P9H5 292 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 AMOTL1Q8IY63 956 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 SWAP70Q9UH65 585 aa18.69■□□□□ 0.58
HMGA1-206ENST00000478214 APPP05067 770 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 CYP2C8P10632 490 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 MTMR2Q13614 643 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 SH3D19Q5HYK7 790 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 TREML2Q5T2D2 321 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 IFFO2Q5TF58 517 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 CCDC129Q6ZRS4 1044 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 CD99L2Q8TCZ2 262 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 CABP5Q9NP86 173 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 ARPP21Q9UBL0 812 aaPredicted RBP18.68■□□□□ 0.58
HMGA1-206ENST00000478214 AGTPBP1Q9UPW5 1226 aa18.68■□□□□ 0.58
HMGA1-206ENST00000478214 ATAD5Q96QE3 1844 aa18.67■□□□□ 0.58
HMGA1-206ENST00000478214 PATL2C9JE40 543 aaKnown RBP18.67■□□□□ 0.58
HMGA1-206ENST00000478214 CDK8P49336 464 aa18.67■□□□□ 0.58
HMGA1-206ENST00000478214 BACE1P56817 501 aa18.67■□□□□ 0.58
HMGA1-206ENST00000478214 SBK1Q52WX2 424 aa18.67■□□□□ 0.58
HMGA1-206ENST00000478214 C16orf86Q6ZW13 317 aa18.67■□□□□ 0.58
HMGA1-206ENST00000478214 PROCA1Q8NCQ7 364 aaPredicted RBP18.67■□□□□ 0.58
HMGA1-206ENST00000478214 ABHD8Q96I13 439 aa18.67■□□□□ 0.58
HMGA1-206ENST00000478214 PARK7Q99497 189 aaKnown RBP18.67■□□□□ 0.58
HMGA1-206ENST00000478214 CPA4Q9UI42 421 aa18.67■□□□□ 0.58
HMGA1-206ENST00000478214 SLC45A1Q9Y2W3 748 aa18.67■□□□□ 0.58
HMGA1-206ENST00000478214 BAZ2AQ9UIF9 1905 aaKnown RBP18.66■□□□□ 0.58
HMGA1-206ENST00000478214 USP17L10C9JJH3 530 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 MPHOSPH10O00566 681 aaKnown RBP18.66■□□□□ 0.58
HMGA1-206ENST00000478214 GUCY1A2P33402 732 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 TDO2P48775 406 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 CAP1Q01518 475 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 SEPT2Q15019 361 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 IFNL3Q8IZI9 196 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 ERO1AQ96HE7 468 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 FAM227BQ96M60 508 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 TAOK2Q9UL54 1235 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 ADGRA2Q96PE1 1338 aa18.66■□□□□ 0.58
HMGA1-206ENST00000478214 A0A0D9SFI3 127 aa18.65■□□□□ 0.58
HMGA1-206ENST00000478214 MINDY4BA8MYZ0 360 aa18.65■□□□□ 0.58
HMGA1-206ENST00000478214 C19orf81C9J6K1 198 aa18.65■□□□□ 0.58
HMGA1-206ENST00000478214 CAPN15O75808 1086 aa18.65■□□□□ 0.58
HMGA1-206ENST00000478214 AKR1B1P15121 316 aa18.65■□□□□ 0.58
HMGA1-206ENST00000478214 TICAM2Q86XR7 235 aa18.65■□□□□ 0.58
HMGA1-206ENST00000478214 ACER1Q8TDN7 264 aa18.65■□□□□ 0.58
HMGA1-206ENST00000478214 HELLSQ9NRZ9 838 aa18.65■□□□□ 0.58
HMGA1-206ENST00000478214 PTPRFP10586 1907 aa18.64■□□□□ 0.58
HMGA1-206ENST00000478214 FOXP2O15409 715 aa18.64■□□□□ 0.57
HMGA1-206ENST00000478214 NMIQ13287 307 aaPredicted RBP18.64■□□□□ 0.57
HMGA1-206ENST00000478214 OTOP1Q7RTM1 612 aa18.64■□□□□ 0.57
HMGA1-206ENST00000478214 STK11IPQ8N1F8 1099 aa18.64■□□□□ 0.57
HMGA1-206ENST00000478214 NACAP1Q9BZK3 213 aa18.64■□□□□ 0.57
HMGA1-206ENST00000478214 EMILIN3Q9NT22 766 aa18.64■□□□□ 0.57
HMGA1-206ENST00000478214 TMOD4Q9NZQ9 345 aa18.64■□□□□ 0.57
HMGA1-206ENST00000478214 TRIM17Q9Y577 477 aa18.64■□□□□ 0.57
HMGA1-206ENST00000478214 ZYXQ15942 572 aaKnown RBP18.63■□□□□ 0.57
HMGA1-206ENST00000478214 VPS53Q5VIR6 699 aa18.63■□□□□ 0.57
HMGA1-206ENST00000478214 TMEM179Q6ZVK1 233 aa18.63■□□□□ 0.57
HMGA1-206ENST00000478214 CCDC17Q96LX7 622 aa18.63■□□□□ 0.57
HMGA1-206ENST00000478214 FEZ1Q99689 392 aa18.63■□□□□ 0.57
HMGA1-206ENST00000478214 EFCC1Q9HA90 598 aa18.63■□□□□ 0.57
HMGA1-206ENST00000478214 ECM2O94769 699 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms