RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 FAM200BP0CF97 657 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 ABCD1P33897 745 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 HDLBPQ00341 1268 aaKnown RBP6.93□□□□□ -1.3
TRA2B-211ENST00000477939 CAVIN4Q5BKX8 364 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 APOBEC3HQ6NTF7 200 aaKnown RBP6.93□□□□□ -1.3
TRA2B-211ENST00000477939 ATG9AQ7Z3C6 839 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 PDCL2Q8N4E4 241 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 TBC1D22AQ8WUA7 517 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 BRI3BPQ8WY22 251 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 TEKT1Q969V4 418 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 ZDHHC15Q96MV8 337 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 DEF6Q9H4E7 631 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 SUGT1Q9Y2Z0 365 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 RPS6KL1Q9Y6S9 549 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 SPDYE5A6NIY4 337 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 EYA2O00167 538 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 PES1O00541 588 aaKnown RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 FRAT2O75474 233 aaPredicted RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 IFIT1P09914 478 aaKnown RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 TNNI2P48788 182 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 NAP1L1P55209 391 aaKnown RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 ALDH1L2Q3SY69 923 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 PRPF38BQ5VTL8 546 aaKnown RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 JAKMIP3Q5VZ66 844 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 KLHL23Q8NBE8 558 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 CD99L2Q8TCZ2 262 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 OTUD5Q96G74 571 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 UPF2Q9HAU5 1272 aaKnown RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 CHCHD3Q9NX63 227 aaKnown RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 SNCAIPQ9Y6H5 919 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 DDX49Q9Y6V7 483 aaKnown RBP6.92□□□□□ -1.3
TRA2B-211ENST00000477939 MAST3O60307 1309 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 LAMA3Q16787 3333 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 SZT2Q5T011 3432 aa6.92□□□□□ -1.3
TRA2B-211ENST00000477939 MYH2Q9UKX2 1941 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 CCL15-CCL14A0A0B4J2E2 113 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 POTEFA5A3E0 1075 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 SMAPO00193 183 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 PRR29P0C7W0 189 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 SLC5A1P13866 664 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 PAX7P23759 505 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 MSNP26038 577 aaKnown RBP6.91□□□□□ -1.3
TRA2B-211ENST00000477939 PRDX5P30044 214 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 MCM5P33992 734 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 MAGEA8P43361 318 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 MAP3K9P80192 1104 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 SP3Q02447 781 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 DIXDC1Q155Q3 683 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 CCL15Q16663 113 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 FILIP1LQ4L180 1135 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 FKBP1CQ5VVH2 108 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 OTUD7BQ6GQQ9 843 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 HHIPL2Q6UWX4 724 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 FAM83AQ86UY5 434 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 SMC5Q8IY18 1101 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 TRMT2AQ8IZ69 625 aaKnown RBP6.91□□□□□ -1.3
TRA2B-211ENST00000477939 LPIN2Q92539 896 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 SYAP1Q96A49 352 aaPredicted RBP6.91□□□□□ -1.3
TRA2B-211ENST00000477939 ERO1AQ96HE7 468 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 WRNIP1Q96S55 665 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 SIL1Q9H173 461 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 PTPN22Q9Y2R2 807 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 DAGLAQ9Y4D2 1042 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 CSADQ9Y600 493 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 COMMD10Q9Y6G5 202 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 PTPRFP10586 1907 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 RFX7Q2KHR2 1363 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 AK9Q5TCS8 1911 aa6.91□□□□□ -1.3
TRA2B-211ENST00000477939 RIOK3O14730 519 aaKnown RBP6.9□□□□□ -1.3
TRA2B-211ENST00000477939 CBFA2T2O43439 604 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 HMMRO75330 724 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 CIAO1O76071 339 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 UBTFL1P0CB47 393 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-211ENST00000477939 VDRP11473 427 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 PHKA1P46020 1223 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 GTF2A2P52657 109 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 RHBDL3P58872 404 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 IRX1P78414 480 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-211ENST00000477939 NFIAQ12857 509 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 BECN1Q14457 450 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 TAF1CQ15572 869 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-211ENST00000477939 ATP2B3Q16720 1220 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 C1QTNF12Q5T7M4 302 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 SASS6Q6UVJ0 657 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 ZSCAN30Q86W11 494 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 ERO1BQ86YB8 467 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 ACRBPQ8NEB7 543 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 WDR66Q8TBY9 1149 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 ZKSCAN4Q969J2 545 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-211ENST00000477939 ARMC5Q96C12 935 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 MEIS3Q99687 375 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 MRIQ9BWK5 157 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 ARHGEF10LQ9HCE6 1279 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 TMOD2Q9NZR1 351 aa6.9□□□□□ -1.3
TRA2B-211ENST00000477939 PA2G4Q9UQ80 394 aaKnown RBP6.9□□□□□ -1.3
TRA2B-211ENST00000477939 LRRFIP2Q9Y608 721 aaKnown RBP6.9□□□□□ -1.3
TRA2B-211ENST00000477939 ATRNL1Q5VV63 1379 aa6.9□□□□□ -1.31
TRA2B-211ENST00000477939 DOCK1Q14185 1865 aa6.9□□□□□ -1.31
TRA2B-211ENST00000477939 CEP290O15078 2479 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms