RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TTC6Q86TZ1 520 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 ZNF280CQ8ND82 737 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 ARHGAP39Q9C0H5 1083 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 PUS7LQ9H0K6 701 aaKnown RBP9.98□□□□□ -0.81
HDAC6-221ENST00000477561 EFCC1Q9HA90 598 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 ZCCHC17Q9NP64 241 aaKnown RBP9.98□□□□□ -0.81
HDAC6-221ENST00000477561 DCP1AQ9NPI6 582 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-221ENST00000477561 SERPINB13Q9UIV8 391 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 FOCADQ5VW36 1801 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 CYP2D7A0A087X1C5 515 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 SMIM22K7EJ46 135 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 GH2P01242 217 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 IGHDP01880 384 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 ASNSP08243 561 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 MX1P20591 662 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 HMGCS2P54868 508 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 TATDN1Q6P1N9 297 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 C17orf99Q6UX52 265 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 KBTBD3Q8NAB2 608 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 PI4K2BQ8TCG2 481 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 PARK7Q99497 189 aaKnown RBP9.97□□□□□ -0.81
HDAC6-221ENST00000477561 AS3MTQ9HBK9 375 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 ZBTB21Q9ULJ3 1066 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 SLC4A4Q9Y6R1 1079 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 TTC41PQ6P2S7 1318 aa9.97□□□□□ -0.81
HDAC6-221ENST00000477561 PHIPQ8WWQ0 1821 aa9.96□□□□□ -0.81
HDAC6-221ENST00000477561 MYH1P12882 1939 aa9.96□□□□□ -0.81
HDAC6-221ENST00000477561 ERC2O15083 957 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 RNF113AO15541 343 aaKnown RBP9.96□□□□□ -0.82
HDAC6-221ENST00000477561 SHMT1P34896 483 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 SOX10P56693 466 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 LACTBP83111 547 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-221ENST00000477561 MTMR2Q13614 643 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 RAB3GAP1Q15042 981 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 CERKLQ49MI3 558 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-221ENST00000477561 SLC44A5Q8NCS7 719 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 OSBP2Q969R2 916 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 DYNLL2Q96FJ2 89 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 LNPKQ9C0E8 428 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 EHD4Q9H223 541 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 RWDD1Q9H446 243 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-221ENST00000477561 PTPN22Q9Y2R2 807 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 ADGRA2Q96PE1 1338 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 ATAD5Q96QE3 1844 aa9.96□□□□□ -0.82
HDAC6-221ENST00000477561 USP17L12C9JPN9 530 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 USP17L21D6R901 530 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 M0R2C6 588 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 MPHOSPH10O00566 681 aaKnown RBP9.95□□□□□ -0.82
HDAC6-221ENST00000477561 GLRX3O76003 335 aaKnown RBP9.95□□□□□ -0.82
HDAC6-221ENST00000477561 CTGFP29279 349 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 PSMC4P43686 418 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 BACE1P56817 501 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 GABPAQ06546 454 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 KIF22Q14807 665 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 ZYXQ15942 572 aaKnown RBP9.95□□□□□ -0.82
HDAC6-221ENST00000477561 ABCB5Q2M3G0 1257 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 STK11IPQ8N1F8 1099 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 SMCR8Q8TEV9 937 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-221ENST00000477561 STRBPQ96SI9 672 aaKnown RBP9.95□□□□□ -0.82
HDAC6-221ENST00000477561 SEC62Q99442 399 aaKnown RBP9.95□□□□□ -0.82
HDAC6-221ENST00000477561 FSD1Q9BTV5 496 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 WDR18Q9BV38 432 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 ATP8A2Q9NTI2 1148 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 AGTPBP1Q9UPW5 1226 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 SALL3Q9BXA9 1300 aa9.95□□□□□ -0.82
HDAC6-221ENST00000477561 NAV1Q8NEY1 1877 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 ZSWIM8A7E2V4 1837 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 USP17L10C9JJH3 530 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 FMNL1O95466 1100 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-221ENST00000477561 BCRP11274 1271 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 PDE1AP54750 535 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 SEPT2Q15019 361 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 ARHGEF6Q15052 776 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 SH3D19Q5HYK7 790 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 C12orf60Q5U649 245 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 PROCA1Q8NCQ7 364 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-221ENST00000477561 ACER1Q8TDN7 264 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 APPBP2Q92624 585 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 TRIM47Q96LD4 638 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 CABP5Q9NP86 173 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 GINM1Q9NU53 330 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 TMOD4Q9NZQ9 345 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 SLC45A1Q9Y2W3 748 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 PTCH2Q9Y6C5 1203 aa9.94□□□□□ -0.82
HDAC6-221ENST00000477561 GSG1L2A8MUP6 293 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 C19orf81C9J6K1 198 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 GPAA1O43292 621 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 PEX10O60683 326 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 MYCP01106 439 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-221ENST00000477561 APPP05067 770 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 ZFYP08048 801 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-221ENST00000477561 OSBPP22059 807 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 GUCY1A2P33402 732 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 CACNB1Q02641 598 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-221ENST00000477561 CTR9Q6PD62 1173 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 SMC5Q8IY18 1101 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 AMOTL1Q8IY63 956 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms