RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 AS3MTQ9HBK9 375 aa14.24□□□□□ -0.13
VARS2-208ENST00000477052 ZBTB21Q9ULJ3 1066 aa14.24□□□□□ -0.13
VARS2-208ENST00000477052 FOCADQ5VW36 1801 aa14.24□□□□□ -0.13
VARS2-208ENST00000477052 USP5P45974 858 aa14.23□□□□□ -0.13
VARS2-208ENST00000477052 BACE1P56817 501 aa14.23□□□□□ -0.13
VARS2-208ENST00000477052 UBE2Q1Q7Z7E8 422 aa14.23□□□□□ -0.13
VARS2-208ENST00000477052 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
VARS2-208ENST00000477052 WDR18Q9BV38 432 aa14.23□□□□□ -0.13
VARS2-208ENST00000477052 TXNRD2Q9NNW7 524 aa14.23□□□□□ -0.13
VARS2-208ENST00000477052 COG6Q9Y2V7 657 aa14.23□□□□□ -0.13
VARS2-208ENST00000477052 ZBED9Q6R2W3 1325 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 FARP2O94887 1054 aaPredicted RBP14.22□□□□□ -0.13
VARS2-208ENST00000477052 SGPL1O95470 568 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 GH2P01242 217 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 TFRCP02786 760 aaKnown RBP14.22□□□□□ -0.13
VARS2-208ENST00000477052 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 ASNSP08243 561 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 FXR1P51114 621 aaKnown RBP eCLIP14.22□□□□□ -0.13
VARS2-208ENST00000477052 IRX3P78415 501 aaPredicted RBP14.22□□□□□ -0.13
VARS2-208ENST00000477052 IRF5Q13568 498 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 SLFNL1Q499Z3 407 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 POTEEQ6S8J3 1075 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 METTL16Q86W50 562 aaKnown RBP14.22□□□□□ -0.13
VARS2-208ENST00000477052 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 RHPN1Q8TCX5 695 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 EDC3Q96F86 508 aaKnown RBP14.22□□□□□ -0.13
VARS2-208ENST00000477052 EMILIN3Q9NT22 766 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 TMOD4Q9NZQ9 345 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 GJD2Q9UKL4 321 aa14.22□□□□□ -0.13
VARS2-208ENST00000477052 MYH1P12882 1939 aa14.21□□□□□ -0.13
VARS2-208ENST00000477052 USP17L10C9JJH3 530 aa14.21□□□□□ -0.13
VARS2-208ENST00000477052 GCLCP48506 637 aaPredicted RBP14.21□□□□□ -0.13
VARS2-208ENST00000477052 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.13
VARS2-208ENST00000477052 SIRT2Q8IXJ6 389 aa14.21□□□□□ -0.13
VARS2-208ENST00000477052 PXYLP1Q8TE99 480 aa14.21□□□□□ -0.13
VARS2-208ENST00000477052 DIS3LQ8TF46 1054 aaKnown RBP14.21□□□□□ -0.13
VARS2-208ENST00000477052 PAGR1Q9BTK6 254 aa14.21□□□□□ -0.13
VARS2-208ENST00000477052 CYP2B6P20813 491 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 PLCD1P51178 756 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 HERVK_113P62684 666 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 MAP3K12Q12852 859 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 RAB3GAP1Q15042 981 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 Q3C1V9 767 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 DNAJC2Q99543 621 aaKnown RBP14.2□□□□□ -0.14
VARS2-208ENST00000477052 TBC1D2Q9BYX2 928 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 PCDH10Q9P2E7 1040 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 PLXNB2O15031 1838 aa14.2□□□□□ -0.14
VARS2-208ENST00000477052 TRIOBPQ9H2D6 2365 aa14.19□□□□□ -0.14
VARS2-208ENST00000477052 GOLIM4O00461 696 aa14.19□□□□□ -0.14
VARS2-208ENST00000477052 CHGBP05060 677 aa14.19□□□□□ -0.14
VARS2-208ENST00000477052 ERC1Q8IUD2 1116 aa14.19□□□□□ -0.14
VARS2-208ENST00000477052 ACER1Q8TDN7 264 aa14.19□□□□□ -0.14
VARS2-208ENST00000477052 RIOK1Q9BRS2 568 aaKnown RBP14.19□□□□□ -0.14
VARS2-208ENST00000477052 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.19□□□□□ -0.14
VARS2-208ENST00000477052 PORCNQ9H237 461 aa14.19□□□□□ -0.14
VARS2-208ENST00000477052 PAK6Q9NQU5 681 aaPredicted RBP14.19□□□□□ -0.14
VARS2-208ENST00000477052 MORF4L1Q9UBU8 362 aa14.19□□□□□ -0.14
VARS2-208ENST00000477052 MAGEB6P1A0A0J9YX57 407 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 C19orf81C9J6K1 198 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 CYP2D6P10635 497 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 PDE6AP16499 860 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 HOXA7P31268 230 aaPredicted RBP14.18□□□□□ -0.14
VARS2-208ENST00000477052 SLC9C2Q5TAH2 1124 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 TATDN1Q6P1N9 297 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 GPRC5AQ8NFJ5 357 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 TRIB2Q92519 343 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 PAWRQ96IZ0 340 aaKnown RBP14.18□□□□□ -0.14
VARS2-208ENST00000477052 FEZ1Q99689 392 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 HTATIP2Q9BUP3 242 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 RBM27Q9P2N5 1060 aaKnown RBP14.18□□□□□ -0.14
VARS2-208ENST00000477052 SERPINB13Q9UIV8 391 aa14.18□□□□□ -0.14
VARS2-208ENST00000477052 ZNF532Q9HCE3 1301 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 SMIM22K7EJ46 135 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 HMGCRP04035 888 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 SHMT1P34896 483 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 CCL14Q16627 93 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 CERKLQ49MI3 558 aaPredicted RBP14.17□□□□□ -0.14
VARS2-208ENST00000477052 C20orf194Q5TEA3 1177 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 USP17L2Q6R6M4 530 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 LCORLQ8N3X6 602 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 SDR42E1Q8WUS8 393 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 ZBTB40Q9NUA8 1239 aa14.17□□□□□ -0.14
VARS2-208ENST00000477052 PRKAB2O43741 272 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 CNMDO75829 334 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 POLR3DP05423 398 aaPredicted RBP14.16□□□□□ -0.14
VARS2-208ENST00000477052 IFIT2P09913 472 aaKnown RBP14.16□□□□□ -0.14
VARS2-208ENST00000477052 GUCY1A2P33402 732 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 ERVK-9P63128 1117 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 ERVK-24P63145 666 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 SEPT2Q15019 361 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 ABCB5Q2M3G0 1257 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 CLASRPQ8N2M8 674 aaKnown RBP14.16□□□□□ -0.14
VARS2-208ENST00000477052 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 CRISPLD2Q9H0B8 497 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 BOLA2Q9H3K6 86 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 ARMT1Q9H993 441 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 MCM9Q9NXL9 1143 aa14.16□□□□□ -0.14
VARS2-208ENST00000477052 TCRBV5S4A2TA0A5A2 114 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms