RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 TBC1D2Q9BYX2 928 aa25.54■■□□□ 1.68
LIME1-204ENST00000476183 ZBTB21Q9ULJ3 1066 aa25.54■■□□□ 1.68
LIME1-204ENST00000476183 CYP2D6P10635 497 aa25.53■■□□□ 1.68
LIME1-204ENST00000476183 TREML2Q5T2D2 321 aa25.53■■□□□ 1.68
LIME1-204ENST00000476183 PARK7Q99497 189 aaKnown RBP25.53■■□□□ 1.68
LIME1-204ENST00000476183 WDR18Q9BV38 432 aa25.53■■□□□ 1.68
LIME1-204ENST00000476183 ARHGAP39Q9C0H5 1083 aa25.53■■□□□ 1.68
LIME1-204ENST00000476183 EFCC1Q9HA90 598 aa25.53■■□□□ 1.68
LIME1-204ENST00000476183 LOC285556D6RIA3 1793 aa25.53■■□□□ 1.68
LIME1-204ENST00000476183 BAZ2AQ9UIF9 1905 aaKnown RBP25.53■■□□□ 1.68
LIME1-204ENST00000476183 MX1P20591 662 aa25.52■■□□□ 1.68
LIME1-204ENST00000476183 SHMT1P34896 483 aa25.52■■□□□ 1.68
LIME1-204ENST00000476183 HMGCS2P54868 508 aa25.52■■□□□ 1.68
LIME1-204ENST00000476183 GABPAQ06546 454 aa25.52■■□□□ 1.68
LIME1-204ENST00000476183 GINM1Q9NU53 330 aa25.52■■□□□ 1.68
LIME1-204ENST00000476183 AGTPBP1Q9UPW5 1226 aa25.52■■□□□ 1.68
LIME1-204ENST00000476183 SLC45A1Q9Y2W3 748 aa25.52■■□□□ 1.68
LIME1-204ENST00000476183 ERC2O15083 957 aa25.51■■□□□ 1.67
LIME1-204ENST00000476183 GLRX3O76003 335 aaKnown RBP25.51■■□□□ 1.67
LIME1-204ENST00000476183 GH2P01242 217 aa25.51■■□□□ 1.67
LIME1-204ENST00000476183 PROCA1Q8NCQ7 364 aaPredicted RBP25.51■■□□□ 1.67
LIME1-204ENST00000476183 AS3MTQ9HBK9 375 aa25.51■■□□□ 1.67
LIME1-204ENST00000476183 IGHDP01880 384 aa25.5■■□□□ 1.67
LIME1-204ENST00000476183 CENPFP49454 3210 aa25.5■■□□□ 1.67
LIME1-204ENST00000476183 LACTBP83111 547 aaPredicted RBP25.5■■□□□ 1.67
LIME1-204ENST00000476183 SH3D19Q5HYK7 790 aa25.5■■□□□ 1.67
LIME1-204ENST00000476183 OSBP2Q969R2 916 aa25.5■■□□□ 1.67
LIME1-204ENST00000476183 ATP8A2Q9NTI2 1148 aa25.5■■□□□ 1.67
LIME1-204ENST00000476183 PTPN22Q9Y2R2 807 aa25.5■■□□□ 1.67
LIME1-204ENST00000476183 SMIM22K7EJ46 135 aa25.49■■□□□ 1.67
LIME1-204ENST00000476183 RNF113AO15541 343 aaKnown RBP25.49■■□□□ 1.67
LIME1-204ENST00000476183 BCRP11274 1271 aa25.49■■□□□ 1.67
LIME1-204ENST00000476183 CTGFP29279 349 aa25.49■■□□□ 1.67
LIME1-204ENST00000476183 BACE1P56817 501 aa25.49■■□□□ 1.67
LIME1-204ENST00000476183 MTMR2Q13614 643 aa25.49■■□□□ 1.67
LIME1-204ENST00000476183 CERKLQ49MI3 558 aaPredicted RBP25.49■■□□□ 1.67
LIME1-204ENST00000476183 SLC4A4Q9Y6R1 1079 aa25.49■■□□□ 1.67
LIME1-204ENST00000476183 SMC5Q8IY18 1101 aa25.48■■□□□ 1.67
LIME1-204ENST00000476183 STRBPQ96SI9 672 aaKnown RBP25.48■■□□□ 1.67
LIME1-204ENST00000476183 RWDD1Q9H446 243 aaPredicted RBP25.48■■□□□ 1.67
LIME1-204ENST00000476183 ZBTB47Q9UFB7 747 aaPredicted RBP25.48■■□□□ 1.67
LIME1-204ENST00000476183 CYP2D7A0A087X1C5 515 aa25.47■■□□□ 1.67
LIME1-204ENST00000476183 ECM2O94769 699 aaPredicted RBP25.47■■□□□ 1.67
LIME1-204ENST00000476183 SLC44A5Q8NCS7 719 aa25.47■■□□□ 1.67
LIME1-204ENST00000476183 APPBP2Q92624 585 aa25.47■■□□□ 1.67
LIME1-204ENST00000476183 DYNLL2Q96FJ2 89 aa25.47■■□□□ 1.67
LIME1-204ENST00000476183 STAP2Q9UGK3 403 aa25.47■■□□□ 1.67
LIME1-204ENST00000476183 ABCB5Q2M3G0 1257 aa25.46■■□□□ 1.67
LIME1-204ENST00000476183 USP17L10C9JJH3 530 aa25.45■■□□□ 1.66
LIME1-204ENST00000476183 USP17L12C9JPN9 530 aa25.45■■□□□ 1.66
LIME1-204ENST00000476183 USP17L21D6R901 530 aa25.45■■□□□ 1.66
LIME1-204ENST00000476183 ZFYP08048 801 aaPredicted RBP25.45■■□□□ 1.66
LIME1-204ENST00000476183 GUCY1A2P33402 732 aa25.45■■□□□ 1.66
LIME1-204ENST00000476183 PDE1AP54750 535 aa25.45■■□□□ 1.66
LIME1-204ENST00000476183 KIF22Q14807 665 aa25.45■■□□□ 1.66
LIME1-204ENST00000476183 C12orf60Q5U649 245 aa25.45■■□□□ 1.66
LIME1-204ENST00000476183 LNPKQ9C0E8 428 aa25.45■■□□□ 1.66
LIME1-204ENST00000476183 M0R2C6 588 aa25.44■■□□□ 1.66
LIME1-204ENST00000476183 SOX10P56693 466 aa25.44■■□□□ 1.66
LIME1-204ENST00000476183 RAB3GAP1Q15042 981 aa25.44■■□□□ 1.66
LIME1-204ENST00000476183 ARHGEF6Q15052 776 aa25.44■■□□□ 1.66
LIME1-204ENST00000476183 B4GALNT3Q6L9W6 998 aa25.44■■□□□ 1.66
LIME1-204ENST00000476183 TRIM47Q96LD4 638 aa25.44■■□□□ 1.66
LIME1-204ENST00000476183 FSD1Q9BTV5 496 aa25.44■■□□□ 1.66
LIME1-204ENST00000476183 GSG1L2A8MUP6 293 aa25.43■■□□□ 1.66
LIME1-204ENST00000476183 C19orf81C9J6K1 198 aa25.43■■□□□ 1.66
LIME1-204ENST00000476183 PSMC4P43686 418 aa25.43■■□□□ 1.66
LIME1-204ENST00000476183 IRX6P78412 446 aaPredicted RBP25.43■■□□□ 1.66
LIME1-204ENST00000476183 CTR9Q6PD62 1173 aa25.43■■□□□ 1.66
LIME1-204ENST00000476183 SMCR8Q8TEV9 937 aaPredicted RBP25.43■■□□□ 1.66
LIME1-204ENST00000476183 ASCC2Q9H1I8 757 aaPredicted RBP25.43■■□□□ 1.66
LIME1-204ENST00000476183 EMILIN3Q9NT22 766 aa25.43■■□□□ 1.66
LIME1-204ENST00000476183 TMOD4Q9NZQ9 345 aa25.43■■□□□ 1.66
LIME1-204ENST00000476183 PNMA3Q9UL41 463 aa25.43■■□□□ 1.66
LIME1-204ENST00000476183 PTCH2Q9Y6C5 1203 aa25.43■■□□□ 1.66
LIME1-204ENST00000476183 GPAA1O43292 621 aa25.42■■□□□ 1.66
LIME1-204ENST00000476183 RGS19P49795 217 aa25.42■■□□□ 1.66
LIME1-204ENST00000476183 ACER1Q8TDN7 264 aa25.42■■□□□ 1.66
LIME1-204ENST00000476183 SEC62Q99442 399 aaKnown RBP25.42■■□□□ 1.66
LIME1-204ENST00000476183 CABP5Q9NP86 173 aa25.42■■□□□ 1.66
LIME1-204ENST00000476183 SWAP70Q9UH65 585 aa25.42■■□□□ 1.66
LIME1-204ENST00000476183 MYH8P13535 1937 aa25.41■■□□□ 1.66
LIME1-204ENST00000476183 MGAMO43451 1857 aa25.41■■□□□ 1.66
LIME1-204ENST00000476183 PABPC4Q13310 644 aaKnown RBP eCLIP25.41■■□□□ 1.66
LIME1-204ENST00000476183 SEPT2Q15019 361 aa25.41■■□□□ 1.66
LIME1-204ENST00000476183 DDRGK1Q96HY6 314 aa25.41■■□□□ 1.66
LIME1-204ENST00000476183 OSBPP22059 807 aa25.4■■□□□ 1.66
LIME1-204ENST00000476183 HOXA7P31268 230 aaPredicted RBP25.4■■□□□ 1.66
LIME1-204ENST00000476183 CDK8P49336 464 aa25.4■■□□□ 1.66
LIME1-204ENST00000476183 NUCB1Q02818 461 aa25.4■■□□□ 1.66
LIME1-204ENST00000476183 LRRFIP1Q32MZ4 808 aaKnown RBP25.4■■□□□ 1.66
LIME1-204ENST00000476183 USP17L2Q6R6M4 530 aa25.4■■□□□ 1.66
LIME1-204ENST00000476183 ANKRD13CQ8N6S4 541 aa25.4■■□□□ 1.66
LIME1-204ENST00000476183 EPB41L4AQ9HCS5 686 aaPredicted RBP25.4■■□□□ 1.66
LIME1-204ENST00000476183 MPHOSPH10O00566 681 aaKnown RBP25.39■■□□□ 1.66
LIME1-204ENST00000476183 FMNL1O95466 1100 aaPredicted RBP25.39■■□□□ 1.66
LIME1-204ENST00000476183 GNRH1P01148 92 aa25.39■■□□□ 1.66
LIME1-204ENST00000476183 AKR1B1P15121 316 aa25.39■■□□□ 1.66
LIME1-204ENST00000476183 ZYXQ15942 572 aaKnown RBP25.39■■□□□ 1.66
LIME1-204ENST00000476183 ZMYM1Q5SVZ6 1142 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms