RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SENP3-EIF4A1A0A087X0R7 540 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 TGFBR3LH3BV60 316 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 IPO5O00410 1097 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 BAG4O95429 457 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 NAT1P18440 290 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 RDXP35241 583 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 PTGIRP43119 386 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 NUCB2P80303 420 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 TCEAL1Q15170 157 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 SLC5A9Q2M3M2 681 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 NXPE4Q6UWF7 544 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 LEKR1Q6ZMV7 388 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 CENPQQ7L2Z9 268 aaPredicted RBP6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 GAS2L3Q86XJ1 694 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 IQUBQ8NA54 791 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 RHBDD1Q8TEB9 315 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 RMDN2Q96LZ7 410 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 TRERF1Q96PN7 1200 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 C22orf23Q9BZE7 217 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 NEUROD4Q9HD90 331 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 NPHS2Q9NP85 383 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 SPATS2LQ9NUQ6 558 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 SPTLC3Q9NUV7 552 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 MAGEC2Q9UBF1 373 aaPredicted RBP6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 TRAK1Q9UPV9 953 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 DISP1Q96F81 1524 aa6.96□□□□□ -1.29
ECHDC1-215ENST00000475319 KIAA0556O60303 1618 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 FAM163BP0C2L3 166 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 PRPHP41219 470 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 CHRNA4P43681 627 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 GATA4P43694 442 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 SART3Q15020 963 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 SYT10Q6XYQ8 523 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 CCDC186Q7Z3E2 898 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 ZNF438Q7Z4V0 828 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 NCAPG2Q86XI2 1143 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 DRAXINQ8NBI3 349 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 RHPN1Q8TCX5 695 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 SNX29Q8TEQ0 813 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 MIEF2Q96C03 454 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 GPATCH3Q96I76 525 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 SPACA7Q96KW9 195 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 POLR3CQ9BUI4 534 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 ZFYVE28Q9HCC9 887 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 A1CFQ9NQ94 594 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 DMGDHQ9UI17 866 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 PPME1Q9Y570 386 aa6.96□□□□□ -1.3
ECHDC1-215ENST00000475319 ZCCHC11Q5TAX3 1644 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 CGNL1Q0VF96 1302 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 ARHGAP31Q2M1Z3 1444 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 MAGI3Q5TCQ9 1506 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 MARCH6O60337 910 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 POLR3DP05423 398 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 IVLP07476 585 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 PLA2G4AP47712 749 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 IDH3AP50213 366 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 GYS2P54840 703 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 TRIP4Q15650 581 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 ZRSR1Q15695 479 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 MCTP1Q6DN14 999 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 XKR5Q6UX68 686 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 Q6ZVU0 165 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 TEX11Q8IYF3 940 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 SAMD3Q8N6K7 520 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 ZNF280CQ8ND82 737 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 GIMAP7Q8NHV1 300 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 GOLGA5Q8TBA6 731 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 C7orf43Q8WVR3 580 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 KIF1BPQ96EK5 621 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 FAXDC2Q96IV6 333 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 SLX1AQ9BQ83 275 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 CRACR2AQ9BSW2 395 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 KBTBD4Q9NVX7 518 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 ZNF446Q9NWS9 450 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 MRPL42Q9Y6G3 142 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 MAP3K4Q9Y6R4 1608 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 ZMYM3Q14202 1370 aa6.95□□□□□ -1.3
ECHDC1-215ENST00000475319 HTATSF1O43719 755 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 KIF5CO60282 957 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 PHACTR2O75167 634 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 VDRP11473 427 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 CTSOP43234 321 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 RPS6KA3P51812 740 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 TPM4P67936 248 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 RELBQ01201 579 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 IFT88Q13099 833 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 LRP8Q14114 963 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 PDIA5Q14554 519 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 CKAP2LQ8IYA6 745 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 TRIM22Q8IYM9 498 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 ZNF397Q8NF99 534 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 TDRD7Q8NHU6 1098 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 RASGRP4Q8TDF6 673 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 SMCR8Q8TEV9 937 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 DNAAF4Q8WXU2 420 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 HSH2DQ96JZ2 352 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 SUSD3Q96L08 255 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 BCO2Q9BYV7 579 aa6.94□□□□□ -1.3
ECHDC1-215ENST00000475319 SRCIN1Q9C0H9 1055 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms