RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TDHQ8IZJ6 230 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 TGFBRAP1Q8WUH2 860 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 API5Q9BZZ5 524 aaKnown RBP15.58■□□□□ 0.08
TRAF4-209ENST00000473421 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 PALD1Q9ULE6 856 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 AKAP2Q9Y2D5 859 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 NDUFB9Q9Y6M9 179 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 LDHCP07864 332 aa15.57■□□□□ 0.08
TRAF4-209ENST00000473421 HOXA7P31268 230 aaPredicted RBP15.57■□□□□ 0.08
TRAF4-209ENST00000473421 RARSP54136 660 aaKnown RBP15.57■□□□□ 0.08
TRAF4-209ENST00000473421 IRX3P78415 501 aaPredicted RBP15.57■□□□□ 0.08
TRAF4-209ENST00000473421 MDM2Q00987 491 aaPredicted RBP15.57■□□□□ 0.08
TRAF4-209ENST00000473421 UBE2OQ9C0C9 1292 aaKnown RBP15.57■□□□□ 0.08
TRAF4-209ENST00000473421 FLRT1Q9NZU1 646 aa15.57■□□□□ 0.08
TRAF4-209ENST00000473421 PI4KBQ9UBF8 816 aa15.57■□□□□ 0.08
TRAF4-209ENST00000473421 SAP30BPQ9UHR5 308 aaKnown RBP15.57■□□□□ 0.08
TRAF4-209ENST00000473421 CNMDO75829 334 aa15.56■□□□□ 0.08
TRAF4-209ENST00000473421 CAPN2P17655 700 aa15.56■□□□□ 0.08
TRAF4-209ENST00000473421 GSTO1P78417 241 aa15.56■□□□□ 0.08
TRAF4-209ENST00000473421 PABPC4Q13310 644 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRAF4-209ENST00000473421 MORN1Q5T089 497 aa15.56■□□□□ 0.08
TRAF4-209ENST00000473421 METTL16Q86W50 562 aaKnown RBP15.56■□□□□ 0.08
TRAF4-209ENST00000473421 GPRC5AQ8NFJ5 357 aa15.56■□□□□ 0.08
TRAF4-209ENST00000473421 NUDT12Q9BQG2 462 aa15.56■□□□□ 0.08
TRAF4-209ENST00000473421 LRP2BPQ9P2M1 347 aa15.56■□□□□ 0.08
TRAF4-209ENST00000473421 HERC5Q9UII4 1024 aaKnown RBP15.56■□□□□ 0.08
TRAF4-209ENST00000473421 FLT1P17948 1338 aa15.55■□□□□ 0.08
TRAF4-209ENST00000473421 CYP2E1P05181 493 aaPredicted RBP15.55■□□□□ 0.08
TRAF4-209ENST00000473421 XRCC5P13010 732 aaKnown RBP15.55■□□□□ 0.08
TRAF4-209ENST00000473421 DYNLL1P63167 89 aaKnown RBP15.55■□□□□ 0.08
TRAF4-209ENST00000473421 GORABQ5T7V8 394 aa15.55■□□□□ 0.08
TRAF4-209ENST00000473421 GPR153Q6NV75 609 aa15.55■□□□□ 0.08
TRAF4-209ENST00000473421 GPR142Q7Z601 462 aa15.55■□□□□ 0.08
TRAF4-209ENST00000473421 PAGR1Q9BTK6 254 aa15.55■□□□□ 0.08
TRAF4-209ENST00000473421 AS3MTQ9HBK9 375 aa15.55■□□□□ 0.08
TRAF4-209ENST00000473421 PIH1D3Q9NQM4 214 aaKnown RBP15.55■□□□□ 0.08
TRAF4-209ENST00000473421 ZBTB21Q9ULJ3 1066 aa15.55■□□□□ 0.08
TRAF4-209ENST00000473421 STXBP5LQ9Y2K9 1186 aa15.55■□□□□ 0.08
TRAF4-209ENST00000473421 MAP4K4O95819 1239 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-209ENST00000473421 PPP4CP60510 307 aa15.54■□□□□ 0.08
TRAF4-209ENST00000473421 ERVK-9P63128 1117 aa15.54■□□□□ 0.08
TRAF4-209ENST00000473421 ERVK-24P63145 666 aa15.54■□□□□ 0.08
TRAF4-209ENST00000473421 DBNDD2Q9BQY9 259 aa15.54■□□□□ 0.08
TRAF4-209ENST00000473421 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
TRAF4-209ENST00000473421 TMOD4Q9NZQ9 345 aa15.54■□□□□ 0.08
TRAF4-209ENST00000473421 VCANP13611 3396 aa15.53■□□□□ 0.08
TRAF4-209ENST00000473421 FOCADQ5VW36 1801 aa15.53■□□□□ 0.08
TRAF4-209ENST00000473421 USP17L10C9JJH3 530 aa15.53■□□□□ 0.08
TRAF4-209ENST00000473421 ASNSP08243 561 aa15.53■□□□□ 0.08
TRAF4-209ENST00000473421 ZKSCAN1P17029 563 aaPredicted RBP15.53■□□□□ 0.08
TRAF4-209ENST00000473421 ZYXQ15942 572 aaKnown RBP15.53■□□□□ 0.08
TRAF4-209ENST00000473421 NAA16Q6N069 864 aaPredicted RBP15.53■□□□□ 0.08
TRAF4-209ENST00000473421 GUCD1Q96NT3 240 aa15.53■□□□□ 0.08
TRAF4-209ENST00000473421 PRUNE2Q8WUY3 3088 aa15.53■□□□□ 0.08
TRAF4-209ENST00000473421 FRMPD3Q5JV73 1810 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 C19orf81C9J6K1 198 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 GH2P01242 217 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 GNAI3P08754 354 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 TRIM27P14373 513 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 ZAP70P43403 619 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 EVX2Q03828 476 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 PLEKHH3Q7Z736 793 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 TRPV1Q8NER1 839 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 SOCS4Q8WXH5 440 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 FAM161BQ96MY7 647 aa15.52■□□□□ 0.08
TRAF4-209ENST00000473421 COL25A1Q9BXS0 654 aaPredicted RBP15.52■□□□□ 0.08
TRAF4-209ENST00000473421 DHX36Q9H2U1 1008 aaKnown RBP15.52■□□□□ 0.08
TRAF4-209ENST00000473421 TLR7Q9NYK1 1049 aaKnown RBP15.52■□□□□ 0.08
TRAF4-209ENST00000473421 POTEB2H3BUK9 544 aa15.51■□□□□ 0.07
TRAF4-209ENST00000473421 BCAR3O75815 825 aa15.51■□□□□ 0.07
TRAF4-209ENST00000473421 MAPK4P31152 587 aa15.51■□□□□ 0.07
TRAF4-209ENST00000473421 FOXP4Q8IVH2 680 aaPredicted RBP15.51■□□□□ 0.07
TRAF4-209ENST00000473421 NPLOC4Q8TAT6 608 aa15.51■□□□□ 0.07
TRAF4-209ENST00000473421 ACER1Q8TDN7 264 aa15.51■□□□□ 0.07
TRAF4-209ENST00000473421 CLUAP1Q96AJ1 413 aa15.51■□□□□ 0.07
TRAF4-209ENST00000473421 BTBD7Q9P203 1132 aa15.51■□□□□ 0.07
TRAF4-209ENST00000473421 HDAC5Q9UQL6 1122 aa15.51■□□□□ 0.07
TRAF4-209ENST00000473421 UQCRFS1P1P0C7P4 283 aa15.5■□□□□ 0.07
TRAF4-209ENST00000473421 RGS2P41220 211 aa15.5■□□□□ 0.07
TRAF4-209ENST00000473421 ATN1P54259 1190 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-209ENST00000473421 MAP2K5Q13163 448 aa15.5■□□□□ 0.07
TRAF4-209ENST00000473421 G3BP1Q13283 466 aaKnown RBP eCLIP15.5■□□□□ 0.07
TRAF4-209ENST00000473421 TNNI3KQ59H18 835 aa15.5■□□□□ 0.07
TRAF4-209ENST00000473421 CRACR2BQ8N4Y2 399 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-209ENST00000473421 MIGA1Q8NAN2 632 aa15.5■□□□□ 0.07
TRAF4-209ENST00000473421 APBA2Q99767 749 aa15.5■□□□□ 0.07
TRAF4-209ENST00000473421 SENP6Q9GZR1 1112 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-209ENST00000473421 FPGT-TNNI3KV9GXZ4 949 aa15.5■□□□□ 0.07
TRAF4-209ENST00000473421 MAST2Q6P0Q8 1798 aa15.49■□□□□ 0.07
TRAF4-209ENST00000473421 IGHA2P01877 340 aa15.49■□□□□ 0.07
TRAF4-209ENST00000473421 GNAI2P04899 355 aa15.49■□□□□ 0.07
TRAF4-209ENST00000473421 CYP2C19P33261 490 aa15.49■□□□□ 0.07
TRAF4-209ENST00000473421 PDE3AQ14432 1141 aa15.49■□□□□ 0.07
TRAF4-209ENST00000473421 TTC39AQ5SRH9 613 aa15.49■□□□□ 0.07
TRAF4-209ENST00000473421 USP17L2Q6R6M4 530 aa15.49■□□□□ 0.07
TRAF4-209ENST00000473421 ARHGAP45Q92619 1136 aa15.49■□□□□ 0.07
TRAF4-209ENST00000473421 EDC3Q96F86 508 aaKnown RBP15.49■□□□□ 0.07
TRAF4-209ENST00000473421 BAG3O95817 575 aa15.48■□□□□ 0.07
TRAF4-209ENST00000473421 CT47B1P0C2W7 299 aaPredicted RBP15.48■□□□□ 0.07
TRAF4-209ENST00000473421 GUCY1A2P33402 732 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms