RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
TTC3-213ENST00000469939 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
TTC3-213ENST00000469939 MIR1-1HGQ9H1L0 117 aa6.21□□□□□ -1.42
TTC3-213ENST00000469939 PICK1Q9NRD5 415 aa6.21□□□□□ -1.42
TTC3-213ENST00000469939 ATG3Q9NT62 314 aa6.21□□□□□ -1.42
TTC3-213ENST00000469939 PCOLCE2Q9UKZ9 415 aa6.21□□□□□ -1.42
TTC3-213ENST00000469939 PCDHB5Q9Y5E4 795 aa6.21□□□□□ -1.42
TTC3-213ENST00000469939 FANCGO15287 622 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 RAB11FIP3O75154 756 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 SSBP05455 408 aaKnown RBP eCLIP6.2□□□□□ -1.42
TTC3-213ENST00000469939 TFE3P19532 575 aaPredicted RBP6.2□□□□□ -1.42
TTC3-213ENST00000469939 NASPP49321 788 aaPredicted RBP6.2□□□□□ -1.42
TTC3-213ENST00000469939 RING1Q06587 406 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 SEPT6Q14141 434 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 INPP5AQ14642 412 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 CPSF6Q16630 551 aaKnown RBP eCLIP6.2□□□□□ -1.42
TTC3-213ENST00000469939 LRFN4Q6PJG9 635 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.2□□□□□ -1.42
TTC3-213ENST00000469939 KIAA0825Q8IV33 1275 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 SHISA5Q8N114 240 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 PHC3Q8NDX5 983 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 ISL2Q96A47 359 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 PLPPR2Q96GM1 343 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 METTL22Q9BUU2 404 aaPredicted RBP6.2□□□□□ -1.42
TTC3-213ENST00000469939 OSBPL1AQ9BXW6 950 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 ZNF408Q9H9D4 720 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 SSU72Q9NP77 194 aaKnown RBP6.2□□□□□ -1.42
TTC3-213ENST00000469939 TLR6Q9Y2C9 796 aa6.2□□□□□ -1.42
TTC3-213ENST00000469939 MARCH6O60337 910 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 COBLO75128 1261 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 NTF4P34130 210 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 ETFBP38117 255 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 GRIK1P39086 918 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 TXKP42681 527 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 ZBTB37Q5TC79 503 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 HDXQ7Z353 690 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.19□□□□□ -1.42
TTC3-213ENST00000469939 PIM2Q9P1W9 311 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 LEMD3Q9Y2U8 911 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 SNCAIPQ9Y6H5 919 aa6.19□□□□□ -1.42
TTC3-213ENST00000469939 PRAMEF27A3QJZ7 478 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 FAM170BA6NMN3 283 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 F6X3S4 739 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 CD97P48960 835 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 IGBP1P78318 339 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 CYP27A1Q02318 531 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 CDK5R2Q13319 367 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 PWP1Q13610 501 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 WIPI1Q5MNZ9 446 aaPredicted RBP6.18□□□□□ -1.42
TTC3-213ENST00000469939 DUSP27Q5VZP5 1158 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 INTS5Q6P9B9 1019 aaKnown RBP6.18□□□□□ -1.42
TTC3-213ENST00000469939 OGFOD3Q6PK18 319 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 CYFIP1Q7L576 1253 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 RELL1Q8IUW5 271 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 MICAL1Q8TDZ2 1067 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 EAF1Q96JC9 268 aaPredicted RBP6.18□□□□□ -1.42
TTC3-213ENST00000469939 GINM1Q9NU53 330 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 EFR3BQ9Y2G0 817 aa6.18□□□□□ -1.42
TTC3-213ENST00000469939 COL17A1Q9UMD9 1497 aaPredicted RBP6.17□□□□□ -1.42
TTC3-213ENST00000469939 hCG_2014768A0A024R1R8 64 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 MINDY4BA8MYZ0 360 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 ENPP3O14638 875 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 KLF4O43474 513 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 CLSTN1O94985 981 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 GBP2P32456 591 aaPredicted RBP6.17□□□□□ -1.42
TTC3-213ENST00000469939 CDK8P49336 464 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 IRAK1P51617 712 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 LMNB2Q03252 620 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 DIEXFQ68CQ4 756 aaKnown RBP6.17□□□□□ -1.42
TTC3-213ENST00000469939 ANKS3Q6ZW76 656 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 ZNF765Q7L2R6 523 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 CCDC84Q86UT8 332 aaPredicted RBP6.17□□□□□ -1.42
TTC3-213ENST00000469939 KCT2Q8NC54 265 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 RNPC3Q96LT9 517 aaKnown RBP6.17□□□□□ -1.42
TTC3-213ENST00000469939 TMEM74Q96NL1 305 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 BRINP2Q9C0B6 783 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 SIRPGQ9P1W8 387 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 MRVI1Q9Y6F6 885 aa6.17□□□□□ -1.42
TTC3-213ENST00000469939 GFRA2O00451 464 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 MED26O95402 600 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 PF4P02776 101 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 FAM87AP0C7U9 286 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 FOSL1P15407 271 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 EIF4A3P38919 411 aaKnown RBP6.16□□□□□ -1.42
TTC3-213ENST00000469939 CAMK2GQ13555 558 aaPredicted RBP6.16□□□□□ -1.42
TTC3-213ENST00000469939 CYP27C1Q4G0S4 372 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 ZNF507Q8TCN5 953 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 ZNF296Q8WUU4 475 aaPredicted RBP6.16□□□□□ -1.42
TTC3-213ENST00000469939 JARID2Q92833 1246 aaPredicted RBP6.16□□□□□ -1.42
TTC3-213ENST00000469939 RHOVQ96L33 236 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 WNT10AQ9GZT5 417 aa6.16□□□□□ -1.42
TTC3-213ENST00000469939 KIAA1324LA8MWY0 1029 aaPredicted RBP6.15□□□□□ -1.42
TTC3-213ENST00000469939 CYP26A1O43174 497 aa6.15□□□□□ -1.42
TTC3-213ENST00000469939 HOXA10P31260 410 aaPredicted RBP6.15□□□□□ -1.42
TTC3-213ENST00000469939 SOX9P48436 509 aa6.15□□□□□ -1.42
TTC3-213ENST00000469939 ETF1P62495 437 aaKnown RBP6.15□□□□□ -1.42
TTC3-213ENST00000469939 RPL6Q02878 288 aaKnown RBP6.15□□□□□ -1.42
TTC3-213ENST00000469939 RAB33AQ14088 237 aa6.15□□□□□ -1.42
TTC3-213ENST00000469939 RNF187Q5TA31 235 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms