RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 HMGN5P82970 282 aaKnown RBP9.34□□□□□ -0.91
SND1-206ENST00000468166 TFAP4Q01664 338 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 SEC23AQ15436 765 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 NFKBIBQ15653 356 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 CCDC178Q5BJE1 867 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 IFIT1BQ5T764 474 aaKnown RBP9.34□□□□□ -0.91
SND1-206ENST00000468166 CPLX2Q6PUV4 134 aaKnown RBP9.34□□□□□ -0.91
SND1-206ENST00000468166 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 FAM184AQ8NB25 1140 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 NSUN7Q8NE18 718 aaKnown RBP9.34□□□□□ -0.91
SND1-206ENST00000468166 GBP4Q96PP9 640 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 MYL10Q9BUA6 226 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 DHX36Q9H2U1 1008 aaKnown RBP9.34□□□□□ -0.91
SND1-206ENST00000468166 TDRD3Q9H7E2 651 aaKnown RBP9.34□□□□□ -0.91
SND1-206ENST00000468166 SWAP70Q9UH65 585 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 SERPINB13Q9UIV8 391 aa9.34□□□□□ -0.91
SND1-206ENST00000468166 GREB1LQ9C091 1923 aaPredicted RBP9.33□□□□□ -0.92
SND1-206ENST00000468166 MYH15Q9Y2K3 1946 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 VPS37CA5D8V6 355 aaPredicted RBP9.33□□□□□ -0.92
SND1-206ENST00000468166 FZD9O00144 591 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 STX6O43752 255 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 MYO1BO43795 1136 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 DTNBO60941 627 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 ENTPD3O75355 529 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 CTDNEP1O95476 244 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 BRD1O95696 1058 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 RXRAP19793 462 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 LMNB1P20700 586 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 SYT1P21579 422 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 MMP14P50281 582 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 PRELPP51888 382 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 TCP10Q12799 353 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 NBR1Q14596 966 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 LARP1BQ659C4 914 aaKnown RBP9.33□□□□□ -0.92
SND1-206ENST00000468166 CATIPQ7Z7H3 387 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 ZSCAN29Q8IWY8 852 aaPredicted RBP9.33□□□□□ -0.92
SND1-206ENST00000468166 CCDC144CPQ8IYA2 1237 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 MTMR14Q8NCE2 650 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 SMARCC2Q8TAQ2 1214 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 DDX11Q96FC9 970 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 PRMT6Q96LA8 375 aaPredicted RBP9.33□□□□□ -0.92
SND1-206ENST00000468166 SYT17Q9BSW7 474 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 EHD4Q9H223 541 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 ZDHHC9Q9Y397 364 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 GJA3Q9Y6H8 435 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 MYH4Q9Y623 1939 aa9.33□□□□□ -0.92
SND1-206ENST00000468166 CLRN2A0PK11 232 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 NMT2O60551 498 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 DDAH1O94760 285 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 CALM1P0DP23 149 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 CALM2P0DP24 149 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 CALM3P0DP25 149 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 ZSCAN22P10073 491 aaPredicted RBP9.32□□□□□ -0.92
SND1-206ENST00000468166 GMPSP49915 693 aaPredicted RBP9.32□□□□□ -0.92
SND1-206ENST00000468166 GABPAQ06546 454 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 RTN1Q16799 776 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
SND1-206ENST00000468166 CRACR2BQ8N4Y2 399 aaPredicted RBP9.32□□□□□ -0.92
SND1-206ENST00000468166 NUP133Q8WUM0 1156 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
SND1-206ENST00000468166 MYOZ2Q9NPC6 264 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 TCP11L1Q9NUJ3 509 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 ZNF70Q9UC06 446 aaPredicted RBP9.32□□□□□ -0.92
SND1-206ENST00000468166 TAOK2Q9UL54 1235 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 ATRNL1Q5VV63 1379 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 PLIN4Q96Q06 1357 aa9.32□□□□□ -0.92
SND1-206ENST00000468166 ZNF541Q9H0D2 1346 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 CCDC196A0A1B0GTZ2 297 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 DDX11L8A8MPP1 907 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 TCP10L2B9ZVM9 353 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 H3BQV1 296 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 ZNF280AP59817 542 aaPredicted RBP9.31□□□□□ -0.92
SND1-206ENST00000468166 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
SND1-206ENST00000468166 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 DGKHQ86XP1 1220 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 ZFPM1Q8IX07 1006 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 MICALL2Q8IY33 904 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 NEDD1Q8NHV4 660 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 KAT14Q9H8E8 782 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 VEZTQ9HBM0 779 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 IL17RBQ9NRM6 502 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 PI4KBQ9UBF8 816 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 MTMR6Q9Y217 621 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 STK36Q9NRP7 1315 aa9.31□□□□□ -0.92
SND1-206ENST00000468166 SHTN1A0MZ66 631 aa9.3□□□□□ -0.92
SND1-206ENST00000468166 DDTLA6NHG4 134 aaPredicted RBP9.3□□□□□ -0.92
SND1-206ENST00000468166 GOLGA6L22H0YM25 854 aa9.3□□□□□ -0.92
SND1-206ENST00000468166 PPFIA3O75145 1194 aa9.3□□□□□ -0.92
SND1-206ENST00000468166 BAG4O95429 457 aaKnown RBP9.3□□□□□ -0.92
SND1-206ENST00000468166 F13A1P00488 732 aa9.3□□□□□ -0.92
SND1-206ENST00000468166 YBX3P16989 372 aaKnown RBP eCLIP9.3□□□□□ -0.922e-12■■□□□ 12
SND1-206ENST00000468166 CDC27P30260 824 aa9.3□□□□□ -0.92
SND1-206ENST00000468166 MCM4P33991 863 aa9.3□□□□□ -0.92
SND1-206ENST00000468166 SHMT1P34896 483 aa9.3□□□□□ -0.92
SND1-206ENST00000468166 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
SND1-206ENST00000468166 FOSBP53539 338 aa9.3□□□□□ -0.92
SND1-206ENST00000468166 PPP2R5BQ15173 497 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms