RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 STARD3NLO95772 234 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 RLBP1P12271 317 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 NFKB1P19838 968 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 EIF2S2P20042 333 aaKnown RBP6.91□□□□□ -1.3
VPS41-211ENST00000466017 AMPD1P23109 780 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 CANXP27824 592 aaKnown RBP6.91□□□□□ -1.3
VPS41-211ENST00000466017 RXRBP28702 533 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 CCT4P50991 539 aaKnown RBP6.91□□□□□ -1.3
VPS41-211ENST00000466017 TRIP4Q15650 581 aaPredicted RBP6.91□□□□□ -1.3
VPS41-211ENST00000466017 C20orf194Q5TEA3 1177 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 KSR2Q6VAB6 950 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 EXOC6Q8TAG9 804 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 NAGPAQ9UK23 515 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 ASAP1Q9ULH1 1129 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.91□□□□□ -1.3
VPS41-211ENST00000466017 KCPQ6ZWJ8 1503 aa6.91□□□□□ -1.3
VPS41-211ENST00000466017 ZNF831Q5JPB2 1677 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 TOGARAM1Q9Y4F4 1720 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 ELOA3CA0A087WX78 387 aaPredicted RBP6.9□□□□□ -1.3
VPS41-211ENST00000466017 ELOA3DA6NLF2 546 aaPredicted RBP6.9□□□□□ -1.3
VPS41-211ENST00000466017 DDX58O95786 925 aaKnown RBP6.9□□□□□ -1.3
VPS41-211ENST00000466017 CCINQ13939 588 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 ELOA3BQ3SY89 546 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 G2E3Q7L622 706 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 KRT27Q7Z3Y8 459 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 FTSJ3Q8IY81 847 aaKnown RBP6.9□□□□□ -1.3
VPS41-211ENST00000466017 CMTR1Q8N1G2 835 aaKnown RBP6.9□□□□□ -1.3
VPS41-211ENST00000466017 TMEM57Q8N5G2 664 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 ELOA3Q8NG57 546 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 PANK1Q8TE04 598 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 TNFRSF25Q93038 417 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 TRIM11Q96F44 468 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 AVENQ9NQS1 362 aaPredicted RBP6.9□□□□□ -1.3
VPS41-211ENST00000466017 ZBTB40Q9NUA8 1239 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 CHPF2Q9P2E5 772 aa6.9□□□□□ -1.3
VPS41-211ENST00000466017 RGS17Q9UGC6 210 aaPredicted RBP6.9□□□□□ -1.3
VPS41-211ENST00000466017 RGS12O14924 1447 aa6.9□□□□□ -1.31
VPS41-211ENST00000466017 LOC102724428A0A0B4J2F2 783 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 PRAMEF22A3QJZ6 481 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 ALDH1L1O75891 902 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 ALBP02768 609 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 CYP19A1P11511 503 aaPredicted RBP6.89□□□□□ -1.31
VPS41-211ENST00000466017 IL6STP40189 918 aaPredicted RBP6.89□□□□□ -1.31
VPS41-211ENST00000466017 ARSDP51689 593 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 SIK1P57059 783 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 MLLT1Q03111 559 aaPredicted RBP6.89□□□□□ -1.31
VPS41-211ENST00000466017 TBC1D8BQ0IIM8 1120 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 C20orf204Q6ZNR8 217 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 BEND7Q8N7W2 519 aaPredicted RBP6.89□□□□□ -1.31
VPS41-211ENST00000466017 DNAAF4Q8WXU2 420 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 COL26A1Q96A83 441 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 SCARF2Q96GP6 870 aaPredicted RBP6.89□□□□□ -1.31
VPS41-211ENST00000466017 PHAXQ9H814 394 aaKnown RBP6.89□□□□□ -1.31
VPS41-211ENST00000466017 HDAC5Q9UQL6 1122 aa6.89□□□□□ -1.31
VPS41-211ENST00000466017 CICQ96RK0 1608 aaPredicted RBP6.89□□□□□ -1.31
VPS41-211ENST00000466017 PXDNLA1KZ92 1463 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 ATP10DQ9P241 1426 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 PI4KAP2A4QPH2 592 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 KRBA1A5PL33 1030 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 TCERG1O14776 1098 aaKnown RBP6.88□□□□□ -1.31
VPS41-211ENST00000466017 PLSCR1O15162 318 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 KCNQ2O43526 872 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 PTCD1O75127 700 aaKnown RBP6.88□□□□□ -1.31
VPS41-211ENST00000466017 ADH7P40394 386 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 IRX6P78412 446 aaPredicted RBP6.88□□□□□ -1.31
VPS41-211ENST00000466017 TRIM28Q13263 835 aaKnown RBP6.88□□□□□ -1.31
VPS41-211ENST00000466017 BEND3Q5T5X7 828 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 DNAJC10Q8IXB1 793 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 TMEM151AQ8N4L1 468 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 PI4KAP1Q8N8J0 262 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 PLBD2Q8NHP8 589 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 ANO2Q9NQ90 1003 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 DNAJB12Q9NXW2 375 aaKnown RBP6.88□□□□□ -1.31
VPS41-211ENST00000466017 TNNQ9UQP3 1299 aa6.88□□□□□ -1.31
VPS41-211ENST00000466017 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.88□□□□□ -1.31
VPS41-211ENST00000466017 PALLDQ8WX93 1383 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 UTYO14607 1347 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 ERVV-1B6SEH8 477 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 A1BGP04217 495 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 GNAI3P08754 354 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 BRD2P25440 801 aaKnown RBP6.87□□□□□ -1.31
VPS41-211ENST00000466017 EIF5P55010 431 aaKnown RBP6.87□□□□□ -1.31
VPS41-211ENST00000466017 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
VPS41-211ENST00000466017 INTS5Q6P9B9 1019 aaKnown RBP6.87□□□□□ -1.31
VPS41-211ENST00000466017 HFE2Q6ZVN8 426 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 COPS6Q7L5N1 327 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 RPAP2Q8IXW5 612 aaPredicted RBP6.87□□□□□ -1.31
VPS41-211ENST00000466017 MICALL1Q8N3F8 863 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 RETREG2Q8NC44 543 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 LINS1Q8NG48 757 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 GPR152Q8TDT2 470 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 GTF3C2Q8WUA4 911 aaPredicted RBP6.87□□□□□ -1.31
VPS41-211ENST00000466017 SYTL4Q96C24 671 aaPredicted RBP6.87□□□□□ -1.31
VPS41-211ENST00000466017 ACSBG1Q96GR2 724 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 METTL22Q9BUU2 404 aaPredicted RBP6.87□□□□□ -1.31
VPS41-211ENST00000466017 STIM2Q9P246 746 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 LAMB4A4D0S4 1761 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 DOT1LQ8TEK3 1739 aa6.87□□□□□ -1.31
VPS41-211ENST00000466017 COL15A1P39059 1388 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms