RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 ZNF280CQ8ND82 737 aa23.31■■□□□ 1.32
SNX11-203ENST00000452859 SEC62Q99442 399 aaKnown RBP23.31■■□□□ 1.32
SNX11-203ENST00000452859 CABP5Q9NP86 173 aa23.31■■□□□ 1.32
SNX11-203ENST00000452859 HELLSQ9NRZ9 838 aa23.31■■□□□ 1.32
SNX11-203ENST00000452859 SIPA1L1O43166 1804 aa23.31■■□□□ 1.32
SNX11-203ENST00000452859 TRIM75PA6NK02 468 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 GSG1L2A8MUP6 293 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 PATL2C9JE40 543 aaKnown RBP23.3■■□□□ 1.32
SNX11-203ENST00000452859 GDF11O95390 407 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 GABPAQ06546 454 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 ZBTB21Q9ULJ3 1066 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 A0A0G2JLL6 359 aaPredicted RBP23.3■■□□□ 1.32
SNX11-203ENST00000452859 CYP2D6P10635 497 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 TDO2P48775 406 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 TAF1CQ15572 869 aaPredicted RBP23.3■■□□□ 1.32
SNX11-203ENST00000452859 CENPQQ7L2Z9 268 aaPredicted RBP23.3■■□□□ 1.32
SNX11-203ENST00000452859 PRRT2Q7Z6L0 340 aaPredicted RBP23.3■■□□□ 1.32
SNX11-203ENST00000452859 ANKRD23Q86SG2 305 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 FAM43AQ8N2R8 423 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 ZFYVE28Q9HCC9 887 aa23.3■■□□□ 1.32
SNX11-203ENST00000452859 BTBD19C9JJ37 291 aa23.29■■□□□ 1.32
SNX11-203ENST00000452859 PDE4AP27815 886 aa23.29■■□□□ 1.32
SNX11-203ENST00000452859 SPP2Q13103 211 aa23.29■■□□□ 1.32
SNX11-203ENST00000452859 ABCB5Q2M3G0 1257 aa23.29■■□□□ 1.32
SNX11-203ENST00000452859 SBK1Q52WX2 424 aa23.29■■□□□ 1.32
SNX11-203ENST00000452859 CTR9Q6PD62 1173 aa23.29■■□□□ 1.32
SNX11-203ENST00000452859 CCDC136Q96JN2 1154 aa23.29■■□□□ 1.32
SNX11-203ENST00000452859 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.29■■□□□ 1.32
SNX11-203ENST00000452859 DDX60LQ5H9U9 1706 aaKnown RBP23.28■■□□□ 1.32
SNX11-203ENST00000452859 GPR25O00155 361 aa23.28■■□□□ 1.32
SNX11-203ENST00000452859 HIP1O00291 1037 aa23.28■■□□□ 1.32
SNX11-203ENST00000452859 GH2P01242 217 aa23.28■■□□□ 1.32
SNX11-203ENST00000452859 SHMT1P34896 483 aa23.28■■□□□ 1.32
SNX11-203ENST00000452859 CCDC84Q86UT8 332 aaPredicted RBP23.28■■□□□ 1.32
SNX11-203ENST00000452859 WDR18Q9BV38 432 aa23.28■■□□□ 1.32
SNX11-203ENST00000452859 CRHR2Q13324 411 aa23.27■■□□□ 1.32
SNX11-203ENST00000452859 MCMDC2Q4G0Z9 681 aa23.27■■□□□ 1.32
SNX11-203ENST00000452859 GADL1Q6ZQY3 521 aa23.27■■□□□ 1.32
SNX11-203ENST00000452859 IFNL3Q8IZI9 196 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 DYNLL2Q96FJ2 89 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 CYP2D7A0A087X1C5 515 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 MINDY4BA8MYZ0 360 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 PDHXO00330 501 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 SDSP20132 328 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 MFAP1P55081 439 aaKnown RBP23.26■■□□□ 1.31
SNX11-203ENST00000452859 RAB3GAP1Q15042 981 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 TTC22Q5TAA0 569 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 CCDC17Q96LX7 622 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 NAPBQ9H115 298 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 DIAPH3Q9NSV4 1193 aa23.26■■□□□ 1.31
SNX11-203ENST00000452859 ATAD5Q96QE3 1844 aa23.25■■□□□ 1.31
SNX11-203ENST00000452859 C19orf81C9J6K1 198 aa23.25■■□□□ 1.31
SNX11-203ENST00000452859 MPHOSPH10O00566 681 aaKnown RBP23.25■■□□□ 1.31
SNX11-203ENST00000452859 FKTNO75072 461 aa23.25■■□□□ 1.31
SNX11-203ENST00000452859 CDK8P49336 464 aa23.25■■□□□ 1.31
SNX11-203ENST00000452859 JAG1P78504 1218 aa23.25■■□□□ 1.31
SNX11-203ENST00000452859 C16orf86Q6ZW13 317 aa23.25■■□□□ 1.31
SNX11-203ENST00000452859 PROCA1Q8NCQ7 364 aaPredicted RBP23.25■■□□□ 1.31
SNX11-203ENST00000452859 ZNF296Q8WUU4 475 aaPredicted RBP23.25■■□□□ 1.31
SNX11-203ENST00000452859 ZNF287Q9HBT7 754 aa23.25■■□□□ 1.31
SNX11-203ENST00000452859 BAZ2AQ9UIF9 1905 aaKnown RBP23.25■■□□□ 1.31
SNX11-203ENST00000452859 USP17L10C9JJH3 530 aa23.24■■□□□ 1.31
SNX11-203ENST00000452859 EVX2Q03828 476 aa23.24■■□□□ 1.31
SNX11-203ENST00000452859 NMIQ13287 307 aaPredicted RBP23.24■■□□□ 1.31
SNX11-203ENST00000452859 MOGSQ13724 837 aa23.24■■□□□ 1.31
SNX11-203ENST00000452859 TNS4Q8IZW8 715 aa23.24■■□□□ 1.31
SNX11-203ENST00000452859 FAM227BQ96M60 508 aa23.24■■□□□ 1.31
SNX11-203ENST00000452859 R3HDMLQ9H3Y0 253 aa23.24■■□□□ 1.31
SNX11-203ENST00000452859 TMOD4Q9NZQ9 345 aa23.24■■□□□ 1.31
SNX11-203ENST00000452859 SLC45A1Q9Y2W3 748 aa23.24■■□□□ 1.31
SNX11-203ENST00000452859 SLC3A2P08195 630 aaKnown RBP23.23■■□□□ 1.31
SNX11-203ENST00000452859 BACE1P56817 501 aa23.23■■□□□ 1.31
SNX11-203ENST00000452859 PABPC4Q13310 644 aaKnown RBP eCLIP23.23■■□□□ 1.31
SNX11-203ENST00000452859 CCDC129Q6ZRS4 1044 aa23.23■■□□□ 1.31
SNX11-203ENST00000452859 SLC44A5Q8NCS7 719 aa23.23■■□□□ 1.31
SNX11-203ENST00000452859 PARK7Q99497 189 aaKnown RBP23.23■■□□□ 1.31
SNX11-203ENST00000452859 EPB41L4AQ9HCS5 686 aaPredicted RBP23.23■■□□□ 1.31
SNX11-203ENST00000452859 A0A0D9SFI3 127 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 HMGCS2P54868 508 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 SH3D19Q5HYK7 790 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 GPAT2Q6NUI2 795 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 TMEM179Q6ZVK1 233 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 ANP32EQ9BTT0 268 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 MKNK2Q9HBH9 465 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 AGTPBP1Q9UPW5 1226 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 PHIPQ8WWQ0 1821 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 CASP8AP2Q9UKL3 1982 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 TLR2O60603 784 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 MTMR2Q13614 643 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 SHROOM1Q2M3G4 852 aaPredicted RBP23.22■■□□□ 1.31
SNX11-203ENST00000452859 FEZ1Q99689 392 aa23.22■■□□□ 1.31
SNX11-203ENST00000452859 PNMA3Q9UL41 463 aa23.21■■□□□ 1.31
SNX11-203ENST00000452859 CCDC171Q6TFL3 1326 aa23.2■■□□□ 1.3
SNX11-203ENST00000452859 USP14P54578 494 aa23.2■■□□□ 1.3
SNX11-203ENST00000452859 SP3Q02447 781 aa23.2■■□□□ 1.3
SNX11-203ENST00000452859 PDE4BQ07343 736 aa23.19■■□□□ 1.3
SNX11-203ENST00000452859 SEPT2Q15019 361 aa23.19■■□□□ 1.3
SNX11-203ENST00000452859 USP17L2Q6R6M4 530 aa23.19■■□□□ 1.3
SNX11-203ENST00000452859 CWC27Q6UX04 472 aaKnown RBP23.19■■□□□ 1.3
SNX11-203ENST00000452859 ERO1AQ96HE7 468 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms