RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
RFC4-210ENST00000449502 JAK2O60674 1132 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 DDAH1O94760 285 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 BRD1O95696 1058 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 PTMSP20962 102 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 KIF5BP33176 963 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 ST3GAL1Q11201 340 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
RFC4-210ENST00000449502 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 ENAHQ8N8S7 591 aaPredicted RBP11.3□□□□□ -0.6
RFC4-210ENST00000449502 MTMR14Q8NCE2 650 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 CTCFLQ8NI51 663 aaPredicted RBP11.3□□□□□ -0.6
RFC4-210ENST00000449502 WASF1Q92558 559 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 EHD4Q9H223 541 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 MYOZ2Q9NPC6 264 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 RBM28Q9NW13 759 aaKnown RBP11.3□□□□□ -0.6
RFC4-210ENST00000449502 ORC3Q9UBD5 711 aaPredicted RBP11.3□□□□□ -0.6
RFC4-210ENST00000449502 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
RFC4-210ENST00000449502 MYH7P12883 1935 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 DDX11L8A8MPP1 907 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 ZSCAN22P10073 491 aaPredicted RBP11.29□□□□□ -0.6
RFC4-210ENST00000449502 RXRAP19793 462 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 RASA1P20936 1047 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 SYT1P21579 422 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 ZNF280AP59817 542 aaPredicted RBP11.29□□□□□ -0.6
RFC4-210ENST00000449502 EVX2Q03828 476 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
RFC4-210ENST00000449502 TNFAIP1Q13829 316 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 TRIM29Q14134 588 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 SEC23AQ15436 765 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 GPR162Q16538 588 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 FANCBQ8NB91 859 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 NSUN7Q8NE18 718 aaKnown RBP11.29□□□□□ -0.6
RFC4-210ENST00000449502 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 SMARCC2Q8TAQ2 1214 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 FAM151AQ8WW52 585 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 MYL10Q9BUA6 226 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 RNF181Q9P0P0 153 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 CNOT7Q9UIV1 285 aaKnown RBP11.29□□□□□ -0.6
RFC4-210ENST00000449502 STX8Q9UNK0 236 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 KIF13BQ9NQT8 1826 aa11.29□□□□□ -0.6
RFC4-210ENST00000449502 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
RFC4-210ENST00000449502 GNAQP50148 359 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 GABPAQ06546 454 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 CERKLQ49MI3 558 aaPredicted RBP11.28□□□□□ -0.6
RFC4-210ENST00000449502 FKBP1CQ5VVH2 108 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 GPC2Q8N158 579 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 TIAM2Q8IVF5 1701 aa11.28□□□□□ -0.6
RFC4-210ENST00000449502 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 NMT2O60551 498 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 TOP1P11387 765 aaKnown RBP11.27□□□□□ -0.61
RFC4-210ENST00000449502 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.61
RFC4-210ENST00000449502 FOSBP53539 338 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 PKP1Q13835 747 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 FAM83AQ86UY5 434 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 ANKS1AQ92625 1134 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 C8orf76Q96K31 380 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 SLC26A6Q9BXS9 759 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 HERC5Q9UII4 1024 aaKnown RBP11.27□□□□□ -0.61
RFC4-210ENST00000449502 ZNF541Q9H0D2 1346 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
RFC4-210ENST00000449502 DDTLA6NHG4 134 aaPredicted RBP11.26□□□□□ -0.61
RFC4-210ENST00000449502 WNT10BO00744 389 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 CTDNEP1O95476 244 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 F13A1P00488 732 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 AKR1B1P15121 316 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 XBP1P17861 261 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 MCM4P33991 863 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 ATP2B2Q01814 1243 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 TBC1D10BQ4KMP7 808 aaPredicted RBP11.26□□□□□ -0.61
RFC4-210ENST00000449502 C9orf131Q5VYM1 1079 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 DPY19L2Q6NUT2 758 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.26□□□□□ -0.61
RFC4-210ENST00000449502 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
RFC4-210ENST00000449502 COL4A5P29400 1685 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 DTNBO60941 627 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
RFC4-210ENST00000449502 BAG4O95429 457 aaKnown RBP11.25□□□□□ -0.61
RFC4-210ENST00000449502 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
RFC4-210ENST00000449502 TTLL1O95922 423 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms