RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 MUC6Q6W4X9 2439 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 PHF20L1A8MW92 1017 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 TNFRSF10AO00220 468 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 XRCC5P13010 732 aaKnown RBP9.26□□□□□ -0.93
RBM39-218ENST00000449489 PTPRAP18433 802 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 PTPREP23469 700 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 GCLCP48506 637 aaPredicted RBP9.26□□□□□ -0.93
RBM39-218ENST00000449489 TJAP1Q5JTD0 557 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 VARS2Q5ST30 1063 aaKnown RBP9.26□□□□□ -0.93
RBM39-218ENST00000449489 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 SCYL3Q8IZE3 742 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 DNAAF4Q8WXU2 420 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 CNNM1Q9NRU3 951 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 AGTPBP1Q9UPW5 1226 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 ZHX2Q9Y6X8 837 aa9.26□□□□□ -0.93
RBM39-218ENST00000449489 TMEM265A0A087WTH1 108 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 PLIN1O60240 522 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 PRSS12P56730 875 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 CAVIN4Q5BKX8 364 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 TAF7LQ5H9L4 462 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 LMBR1LQ6UX01 489 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 VPS37DQ86XT2 251 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 TRMT44Q8IYL2 757 aaKnown RBP9.25□□□□□ -0.93
RBM39-218ENST00000449489 TSPYL6Q8N831 410 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 FAM161BQ96MY7 647 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 LBHD1Q9BQE6 289 aaPredicted RBP9.25□□□□□ -0.93
RBM39-218ENST00000449489 PICK1Q9NRD5 415 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 PHIPQ8WWQ0 1821 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 MROH5Q6ZUA9 1318 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 KIF16BQ96L93 1317 aa9.25□□□□□ -0.93
RBM39-218ENST00000449489 ATRNL1Q5VV63 1379 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 TRANK1O15050 2925 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 SMAD3P84022 425 aaKnown RBP9.24□□□□□ -0.93
RBM39-218ENST00000449489 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
RBM39-218ENST00000449489 FLIIQ13045 1269 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 WDR43Q15061 677 aaKnown RBP eCLIP9.24□□□□□ -0.93
RBM39-218ENST00000449489 LRRC26Q2I0M4 334 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 PADI6Q6TGC4 694 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 GADL1Q6ZQY3 521 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 G2E3Q7L622 706 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 ANKRD13CQ8N6S4 541 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
RBM39-218ENST00000449489 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 FAM122AQ96E09 287 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 ZNF594Q96JF6 807 aaPredicted RBP9.24□□□□□ -0.93
RBM39-218ENST00000449489 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 CHD7Q9P2D1 2997 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 ADAMTS8Q9UP79 889 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
RBM39-218ENST00000449489 CTNND1O60716 968 aaKnown RBP9.23□□□□□ -0.93
RBM39-218ENST00000449489 FRAT2O75474 233 aaPredicted RBP9.23□□□□□ -0.93
RBM39-218ENST00000449489 CDC42EP5Q6NZY7 148 aa9.23□□□□□ -0.93
RBM39-218ENST00000449489 TTC13Q8NBP0 860 aa9.23□□□□□ -0.93
RBM39-218ENST00000449489 TRIB2Q92519 343 aa9.23□□□□□ -0.93
RBM39-218ENST00000449489 FAM198AQ9UFP1 575 aa9.23□□□□□ -0.93
RBM39-218ENST00000449489 CHMP3Q9Y3E7 222 aa9.23□□□□□ -0.93
RBM39-218ENST00000449489 REV3LO60673 3130 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 ENTPD3O75355 529 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 FOSL2P15408 326 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 NFIAQ12857 509 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 TRIM32Q13049 653 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 CHAF1AQ13111 956 aaPredicted RBP9.22□□□□□ -0.93
RBM39-218ENST00000449489 PABPC4Q13310 644 aaKnown RBP eCLIP9.22□□□□□ -0.93
RBM39-218ENST00000449489 EPHA10Q5JZY3 1008 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 METTL3Q86U44 580 aaKnown RBP9.22□□□□□ -0.93
RBM39-218ENST00000449489 WDR66Q8TBY9 1149 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 SOCS4Q8WXH5 440 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 IDI2Q9BXS1 227 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 TBC1D2Q9BYX2 928 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 TTYH1Q9H313 450 aaPredicted RBP9.22□□□□□ -0.93
RBM39-218ENST00000449489 MORF4L1Q9UBU8 362 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 SYNGAP1Q96PV0 1343 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 MAST2Q6P0Q8 1798 aa9.22□□□□□ -0.93
RBM39-218ENST00000449489 PDE8BO95263 885 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 TCP10Q12799 353 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 FKBP5Q13451 457 aaPredicted RBP9.21□□□□□ -0.94
RBM39-218ENST00000449489 BEND3Q5T5X7 828 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 MYLIPQ8WY64 445 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 GOPCQ9HD26 462 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 IQSEC3Q9UPP2 1182 aaPredicted RBP9.21□□□□□ -0.94
RBM39-218ENST00000449489 DAGLAQ9Y4D2 1042 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 ADGRG1Q9Y653 693 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 MYBBP1AQ9BQG0 1328 aaKnown RBP9.21□□□□□ -0.94
RBM39-218ENST00000449489 LTBP2Q14767 1821 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 DOCK2Q92608 1830 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 DOCK1Q14185 1865 aa9.21□□□□□ -0.94
RBM39-218ENST00000449489 LOC285556D6RIA3 1793 aa9.2□□□□□ -0.94
RBM39-218ENST00000449489 GRM8O00222 908 aa9.2□□□□□ -0.94
RBM39-218ENST00000449489 CACNB2Q08289 660 aaPredicted RBP9.2□□□□□ -0.94
RBM39-218ENST00000449489 SHHQ15465 462 aa9.2□□□□□ -0.94
RBM39-218ENST00000449489 TWISTNBQ3B726 338 aaPredicted RBP9.2□□□□□ -0.94
RBM39-218ENST00000449489 TREML2Q5T2D2 321 aa9.2□□□□□ -0.94
RBM39-218ENST00000449489 VGLL2Q8N8G2 317 aa9.2□□□□□ -0.94
RBM39-218ENST00000449489 ATXN2LQ8WWM7 1075 aaKnown RBP9.2□□□□□ -0.94
RBM39-218ENST00000449489 USP6NLQ92738 828 aa9.2□□□□□ -0.94
RBM39-218ENST00000449489 NUDT12Q9BQG2 462 aa9.2□□□□□ -0.94
RBM39-218ENST00000449489 PUS3Q9BZE2 481 aaKnown RBP9.2□□□□□ -0.94
RBM39-218ENST00000449489 PRKAG2Q9UGJ0 569 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms