RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 KCNH4Q9UQ05 1017 aa14.64□□□□□ -0.07
LTBR-204ENST00000444814 MYH7P12883 1935 aa14.63□□□□□ -0.07
LTBR-204ENST00000444814 MYO5AQ9Y4I1 1855 aaKnown RBP14.63□□□□□ -0.07
LTBR-204ENST00000444814 USP17L12C9JPN9 530 aa14.63□□□□□ -0.07
LTBR-204ENST00000444814 USP17L21D6R901 530 aa14.63□□□□□ -0.07
LTBR-204ENST00000444814 IRF6O14896 467 aa14.63□□□□□ -0.07
LTBR-204ENST00000444814 TRPA1O75762 1119 aa14.63□□□□□ -0.07
LTBR-204ENST00000444814 FOXN1O15353 648 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 PRKAB2O43741 272 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 SDSP20132 328 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 ABCB5Q2M3G0 1257 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 SLC4A8Q2Y0W8 1093 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 C12orf60Q5U649 245 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 TATDN1Q6P1N9 297 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 ZNF280CQ8ND82 737 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 ZFYVE28Q9HCC9 887 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 TMOD4Q9NZQ9 345 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 FOCADQ5VW36 1801 aa14.62□□□□□ -0.07
LTBR-204ENST00000444814 FAM196BA6NMK8 535 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 M0R2C6 588 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 PDE4BQ07343 736 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 NOM1Q5C9Z4 860 aaKnown RBP14.61□□□□□ -0.07
LTBR-204ENST00000444814 PPP4R3BQ5MIZ7 849 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 ZIC5Q96T25 663 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 CFHR5Q9BXR6 569 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 SH2D4AQ9H788 454 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 MKNK2Q9HBH9 465 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 PPP4R2Q9NY27 417 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 PNMA3Q9UL41 463 aa14.61□□□□□ -0.07
LTBR-204ENST00000444814 GSG1L2A8MUP6 293 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 MINDY4BA8MYZ0 360 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 C19orf81C9J6K1 198 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 MPHOSPH10O00566 681 aaKnown RBP14.6□□□□□ -0.07
LTBR-204ENST00000444814 GJA5P36382 358 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 PLCD1P51178 756 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 SLFNL1Q499Z3 407 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 CTR9Q6PD62 1173 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 CASC1Q6TDU7 716 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 TMEM179Q6ZVK1 233 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 ANKRD23Q86SG2 305 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 IFNL3Q8IZI9 196 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 MS4A4AQ96JQ5 239 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 FEZ1Q99689 392 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 WDR18Q9BV38 432 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 ZBTB21Q9ULJ3 1066 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 AFG3L2Q9Y4W6 797 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 NAV1Q8NEY1 1877 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 RAD50Q92878 1312 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 OTOFQ9HC10 1997 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 HSPA8P11142 646 aaKnown RBP14.6□□□□□ -0.07
LTBR-204ENST00000444814 LBX1P52954 281 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 USP14P54578 494 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 GABPAQ06546 454 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 TAF1CQ15572 869 aaPredicted RBP14.6□□□□□ -0.07
LTBR-204ENST00000444814 C16orf86Q6ZW13 317 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 PROCA1Q8NCQ7 364 aaPredicted RBP14.6□□□□□ -0.07
LTBR-204ENST00000444814 UBE2Q2Q8WVN8 375 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 PARK7Q99497 189 aaKnown RBP14.6□□□□□ -0.07
LTBR-204ENST00000444814 SLC45A1Q9Y2W3 748 aa14.6□□□□□ -0.07
LTBR-204ENST00000444814 CCDC171Q6TFL3 1326 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 MYH1P12882 1939 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 A0A0G2JLL6 359 aaPredicted RBP14.59□□□□□ -0.07
LTBR-204ENST00000444814 TRIM75PA6NK02 468 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 USP17L10C9JJH3 530 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 GDF11O95390 407 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 GH2P01242 217 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 PDE4AP27815 886 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 NT5C2P49902 561 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 SPP2Q13103 211 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 NMIQ13287 307 aaPredicted RBP14.59□□□□□ -0.07
LTBR-204ENST00000444814 RAB3GAP1Q15042 981 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 GADL1Q6ZQY3 521 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 PRRT2Q7Z6L0 340 aaPredicted RBP14.59□□□□□ -0.07
LTBR-204ENST00000444814 ZNF444Q8N0Y2 327 aaPredicted RBP14.59□□□□□ -0.07
LTBR-204ENST00000444814 BRI3BPQ8WY22 251 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 ARHGEF10LQ9HCE6 1279 aa14.59□□□□□ -0.07
LTBR-204ENST00000444814 DOCK1Q14185 1865 aa14.58□□□□□ -0.08
LTBR-204ENST00000444814 OSBPP22059 807 aa14.58□□□□□ -0.08
LTBR-204ENST00000444814 SHMT1P34896 483 aa14.58□□□□□ -0.08
LTBR-204ENST00000444814 CDK8P49336 464 aa14.58□□□□□ -0.08
LTBR-204ENST00000444814 ALX1Q15699 326 aa14.58□□□□□ -0.08
LTBR-204ENST00000444814 CWC27Q6UX04 472 aaKnown RBP14.58□□□□□ -0.08
LTBR-204ENST00000444814 DNAJC18Q9H819 358 aa14.58□□□□□ -0.08
LTBR-204ENST00000444814 CTNNA3Q9UI47 895 aa14.58□□□□□ -0.08
LTBR-204ENST00000444814 ZMYM6O95789 1325 aa14.57□□□□□ -0.08
LTBR-204ENST00000444814 CHGBP05060 677 aa14.57□□□□□ -0.08
LTBR-204ENST00000444814 PCP11498 1178 aaKnown RBP14.57□□□□□ -0.08
LTBR-204ENST00000444814 CDK11BP21127 795 aaKnown RBP14.57□□□□□ -0.08
LTBR-204ENST00000444814 KIF22Q14807 665 aa14.57□□□□□ -0.08
LTBR-204ENST00000444814 USP17L2Q6R6M4 530 aa14.57□□□□□ -0.08
LTBR-204ENST00000444814 SEC62Q99442 399 aaKnown RBP14.57□□□□□ -0.08
LTBR-204ENST00000444814 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
LTBR-204ENST00000444814 A0A0D9SFI3 127 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 BTBD19C9JJ37 291 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 PDHXO00330 501 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 IGF2BP3O00425 579 aaKnown RBP eCLIP14.56□□□□□ -0.08
LTBR-204ENST00000444814 FKTNO75072 461 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 CYP2D6P10635 497 aa14.56□□□□□ -0.08
LTBR-204ENST00000444814 BACE1P56817 501 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms