RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ATF3P18847 181 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 RPS26P62854 115 aaKnown RBP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 C10orf62Q5T681 223 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 ZNF669Q96BR6 464 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 CFAP53Q96M91 514 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 TMEM51Q9NW97 253 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 INTUQ9ULD6 942 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 ZNRF3Q9ULT6 936 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 TCOF1Q13428 1488 aaKnown RBP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 DISP1Q96F81 1524 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 A0A087X0B3 334 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 RNASEH2AO75792 299 aaKnown RBP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 GUCY2FP51841 1108 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 MPP2Q14168 576 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 HLTFQ14527 1009 aaKnown RBP eCLIP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 LRRC41Q15345 812 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 CCDC93Q567U6 631 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 C6orf15Q6UXA7 325 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 ANKRD13DQ6ZTN6 518 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 KRT77Q7Z794 578 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 LSRQ86X29 649 aaPredicted RBP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 REXO1Q8N1G1 1221 aaKnown RBP6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 MYO1HQ8N1T3 1032 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 SLC39A13Q96H72 371 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 KANSL3Q9P2N6 904 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 HDAC9Q9UKV0 1011 aa6.97□□□□□ -1.29
ALMS1-IT1-201ENST00000441587 RASGRP1O95267 797 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SCGB1D2O95969 90 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MCL1Q07820 350 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SLC27A3Q5K4L6 730 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CCDC84Q86UT8 332 aaPredicted RBP6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SKAP1Q86WV1 359 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TEX19Q8NA77 164 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 JARID2Q92833 1246 aaPredicted RBP6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PPCSQ9HAB8 311 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ASAP1Q9ULH1 1129 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ODF2LQ9ULJ1 636 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SMC3Q9UQE7 1217 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SYNJ2O15056 1496 aa6.96□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CCDC163A0A0D9SF12 145 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SHTN1A0MZ66 631 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PES1O00541 588 aaKnown RBP6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ENC1O14682 589 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MTA2O94776 668 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 BPNT1O95861 308 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 C4orf17Q53FE4 359 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KANK3Q6NY19 840 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 FAM178BQ8IXR5 827 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 LMNTD2Q8IXW0 634 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RBBP8NLQ8NC74 664 aaPredicted RBP6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 BRMS1Q9HCU9 246 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CHST12Q9NRB3 414 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RBM28Q9NW13 759 aaKnown RBP6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 POLG2Q9UHN1 485 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RAPGEF6Q8TEU7 1601 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TONSLQ96HA7 1378 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PABPN1LA6NDY0 278 aaKnown RBP6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 B2RBV5 119 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 IGHDP01880 384 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RBP3P10745 1247 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CASQ1P31415 396 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 HMGN5P82970 282 aaKnown RBP6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PABPC4Q13310 644 aaKnown RBP eCLIP6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 UBE2Q1Q7Z7E8 422 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 C14orf80Q86SX3 495 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 LCA5Q86VQ0 697 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 MARVELD3Q96A59 401 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 NECAB3Q96P71 396 aaPredicted RBP6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SLC26A8Q96RN1 970 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RABGAP1Q9Y3P9 1069 aa6.95□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 GCC2Q8IWJ2 1684 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 IPO8O15397 1037 aaKnown RBP6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SIAH2O43255 324 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 EGFRP00533 1210 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CYP2E1P05181 493 aaPredicted RBP6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 FAM153BP0C7A2 387 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RAB27AP51159 221 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SIM2Q14190 667 aaPredicted RBP6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 AKAP4Q5JQC9 854 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 EEPD1Q7L9B9 569 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RNF180Q86T96 592 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SUGP1Q8IWZ8 645 aaKnown RBP6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ERP27Q96DN0 273 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TCF12Q99081 682 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ZIM2Q9NZV7 527 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 AKNAQ7Z591 1439 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CASP2P42575 452 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RELBQ01201 579 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CLCQ05315 142 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 LONRF2Q1L5Z9 754 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 LRRC69Q6ZNQ3 347 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 REC114Q7Z4M0 266 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ANKRD13BQ86YJ7 626 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 ZNF395Q9H8N7 513 aaPredicted RBP6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RRP7BPQ9NSQ0 103 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SALL4Q9UJQ4 1053 aa6.94□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms