RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 DDRGK1Q96HY6 314 aa28.92■■■□□ 2.22
CPNE1-217ENST00000439669 LNPKQ9C0E8 428 aa28.92■■■□□ 2.22
CPNE1-217ENST00000439669 ATP8A2Q9NTI2 1148 aa28.92■■■□□ 2.22
CPNE1-217ENST00000439669 GINM1Q9NU53 330 aa28.92■■■□□ 2.22
CPNE1-217ENST00000439669 RNF113AO15541 343 aaKnown RBP28.91■■■□□ 2.22
CPNE1-217ENST00000439669 B4GALNT3Q6L9W6 998 aa28.91■■■□□ 2.22
CPNE1-217ENST00000439669 TATDN1Q6P1N9 297 aa28.91■■■□□ 2.22
CPNE1-217ENST00000439669 SMC5Q8IY18 1101 aa28.91■■■□□ 2.22
CPNE1-217ENST00000439669 APPBP2Q92624 585 aa28.91■■■□□ 2.22
CPNE1-217ENST00000439669 FSD1Q9BTV5 496 aa28.91■■■□□ 2.22
CPNE1-217ENST00000439669 SLC4A4Q9Y6R1 1079 aa28.91■■■□□ 2.22
CPNE1-217ENST00000439669 IGHDP01880 384 aa28.9■■■□□ 2.22
CPNE1-217ENST00000439669 CYP2D6P10635 497 aa28.9■■■□□ 2.22
CPNE1-217ENST00000439669 CPA4Q9UI42 421 aa28.9■■■□□ 2.22
CPNE1-217ENST00000439669 GH2P01242 217 aa28.89■■■□□ 2.22
CPNE1-217ENST00000439669 HMGCS2P54868 508 aa28.89■■■□□ 2.22
CPNE1-217ENST00000439669 EVX2Q03828 476 aa28.89■■■□□ 2.22
CPNE1-217ENST00000439669 OTOP1Q7RTM1 612 aa28.89■■■□□ 2.22
CPNE1-217ENST00000439669 AMOTL1Q8IY63 956 aa28.89■■■□□ 2.22
CPNE1-217ENST00000439669 CYP2C8P10632 490 aa28.88■■■□□ 2.21
CPNE1-217ENST00000439669 PDE1AP54750 535 aa28.88■■■□□ 2.21
CPNE1-217ENST00000439669 MTMR2Q13614 643 aa28.88■■■□□ 2.21
CPNE1-217ENST00000439669 CERKLQ49MI3 558 aaPredicted RBP28.88■■■□□ 2.21
CPNE1-217ENST00000439669 FBXO46Q6PJ61 603 aaPredicted RBP28.88■■■□□ 2.21
CPNE1-217ENST00000439669 OSBP2Q969R2 916 aa28.88■■■□□ 2.21
CPNE1-217ENST00000439669 WDR18Q9BV38 432 aa28.88■■■□□ 2.21
CPNE1-217ENST00000439669 EFCC1Q9HA90 598 aa28.88■■■□□ 2.21
CPNE1-217ENST00000439669 AGTPBP1Q9UPW5 1226 aa28.88■■■□□ 2.21
CPNE1-217ENST00000439669 SHMT1P34896 483 aa28.87■■■□□ 2.21
CPNE1-217ENST00000439669 GABPAQ06546 454 aa28.87■■■□□ 2.21
CPNE1-217ENST00000439669 PROCA1Q8NCQ7 364 aaPredicted RBP28.87■■■□□ 2.21
CPNE1-217ENST00000439669 STAP2Q9UGK3 403 aa28.87■■■□□ 2.21
CPNE1-217ENST00000439669 SLC45A1Q9Y2W3 748 aa28.87■■■□□ 2.21
CPNE1-217ENST00000439669 KIF22Q14807 665 aa28.86■■■□□ 2.21
CPNE1-217ENST00000439669 ARHGEF6Q15052 776 aa28.86■■■□□ 2.21
CPNE1-217ENST00000439669 ABCB5Q2M3G0 1257 aa28.86■■■□□ 2.21
CPNE1-217ENST00000439669 TREML2Q5T2D2 321 aa28.86■■■□□ 2.21
CPNE1-217ENST00000439669 C17orf99Q6UX52 265 aa28.86■■■□□ 2.21
CPNE1-217ENST00000439669 STRBPQ96SI9 672 aaKnown RBP28.86■■■□□ 2.21
CPNE1-217ENST00000439669 HPS5Q9UPZ3 1129 aa28.86■■■□□ 2.21
CPNE1-217ENST00000439669 ADGRA2Q96PE1 1338 aa28.86■■■□□ 2.21
CPNE1-217ENST00000439669 BAZ2AQ9UIF9 1905 aaKnown RBP28.86■■■□□ 2.21
CPNE1-217ENST00000439669 CABP5Q9NP86 173 aa28.85■■■□□ 2.21
CPNE1-217ENST00000439669 TMOD4Q9NZQ9 345 aa28.85■■■□□ 2.21
CPNE1-217ENST00000439669 LOC285556D6RIA3 1793 aa28.85■■■□□ 2.21
CPNE1-217ENST00000439669 CYP2D7A0A087X1C5 515 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 USP17L12C9JPN9 530 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 USP17L21D6R901 530 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 M0R2C6 588 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 GPAA1O43292 621 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 ECM2O94769 699 aaPredicted RBP28.84■■■□□ 2.21
CPNE1-217ENST00000439669 BACE1P56817 501 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 CAP1Q01518 475 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 RAB3GAP1Q15042 981 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 SH3D19Q5HYK7 790 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 CHD1LQ86WJ1 897 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 SLC44A5Q8NCS7 719 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 SMCR8Q8TEV9 937 aaPredicted RBP28.84■■■□□ 2.21
CPNE1-217ENST00000439669 DYNLL2Q96FJ2 89 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 SWAP70Q9UH65 585 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 PNMA3Q9UL41 463 aa28.84■■■□□ 2.21
CPNE1-217ENST00000439669 USP17L10C9JJH3 530 aa28.83■■■□□ 2.21
CPNE1-217ENST00000439669 LACTBP83111 547 aaPredicted RBP28.83■■■□□ 2.21
CPNE1-217ENST00000439669 FEZ1Q99689 392 aa28.83■■■□□ 2.21
CPNE1-217ENST00000439669 C19orf81C9J6K1 198 aa28.82■■■□□ 2.2
CPNE1-217ENST00000439669 MPHOSPH10O00566 681 aaKnown RBP28.82■■■□□ 2.2
CPNE1-217ENST00000439669 NUCB1Q02818 461 aa28.82■■■□□ 2.2
CPNE1-217ENST00000439669 PABPC4Q13310 644 aaKnown RBP eCLIP28.82■■■□□ 2.2
CPNE1-217ENST00000439669 C12orf60Q5U649 245 aa28.82■■■□□ 2.2
CPNE1-217ENST00000439669 EVI5LQ96CN4 794 aa28.81■■■□□ 2.2
CPNE1-217ENST00000439669 ARHGAP39Q9C0H5 1083 aa28.81■■■□□ 2.2
CPNE1-217ENST00000439669 ARPP21Q9UBL0 812 aaPredicted RBP28.81■■■□□ 2.2
CPNE1-217ENST00000439669 GNAT2P19087 354 aa28.8■■■□□ 2.2
CPNE1-217ENST00000439669 CTR9Q6PD62 1173 aa28.8■■■□□ 2.2
CPNE1-217ENST00000439669 SEC62Q99442 399 aaKnown RBP28.8■■■□□ 2.2
CPNE1-217ENST00000439669 TAOK2Q9UL54 1235 aa28.8■■■□□ 2.2
CPNE1-217ENST00000439669 PTPN22Q9Y2R2 807 aa28.8■■■□□ 2.2
CPNE1-217ENST00000439669 GSG1L2A8MUP6 293 aa28.79■■■□□ 2.2
CPNE1-217ENST00000439669 SMIM22K7EJ46 135 aa28.79■■■□□ 2.2
CPNE1-217ENST00000439669 APPP05067 770 aa28.79■■■□□ 2.2
CPNE1-217ENST00000439669 BCRP11274 1271 aa28.79■■■□□ 2.2
CPNE1-217ENST00000439669 OSBPP22059 807 aa28.79■■■□□ 2.2
CPNE1-217ENST00000439669 ZYXQ15942 572 aaKnown RBP28.79■■■□□ 2.2
CPNE1-217ENST00000439669 ZMYM1Q5SVZ6 1142 aa28.79■■■□□ 2.2
CPNE1-217ENST00000439669 ZSWIM8A7E2V4 1837 aa28.78■■■□□ 2.2
CPNE1-217ENST00000439669 TDO2P48775 406 aa28.78■■■□□ 2.2
CPNE1-217ENST00000439669 SEPT2Q15019 361 aa28.78■■■□□ 2.2
CPNE1-217ENST00000439669 GIMAP6Q6P9H5 292 aa28.78■■■□□ 2.2
CPNE1-217ENST00000439669 USP17L2Q6R6M4 530 aa28.78■■■□□ 2.2
CPNE1-217ENST00000439669 PSMC4P43686 418 aa28.77■■■□□ 2.2
CPNE1-217ENST00000439669 CDK8P49336 464 aa28.77■■■□□ 2.2
CPNE1-217ENST00000439669 IRX3P78415 501 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-217ENST00000439669 C16orf86Q6ZW13 317 aa28.77■■■□□ 2.2
CPNE1-217ENST00000439669 ASCC2Q9H1I8 757 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-217ENST00000439669 MYH8P13535 1937 aa28.77■■■□□ 2.2
CPNE1-217ENST00000439669 TRIM6-TRIM34B2RNG4 842 aa28.76■■■□□ 2.19
CPNE1-217ENST00000439669 GUCY1A2P33402 732 aa28.76■■■□□ 2.19
CPNE1-217ENST00000439669 ACER1Q8TDN7 264 aa28.76■■■□□ 2.19
CPNE1-217ENST00000439669 EPB41L4AQ9HCS5 686 aaPredicted RBP28.76■■■□□ 2.19
CPNE1-217ENST00000439669 EMILIN3Q9NT22 766 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms