RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 DDX56Q9NY93 547 aaKnown RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 PSD3Q9NYI0 1048 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.28□□□□□ -0.925e-6■■■□□ 17
VTI1A-202ENST00000432306 V9GYY5 206 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 GOLGB1Q14789 3259 aaKnown RBP9.27□□□□□ -0.92
VTI1A-202ENST00000432306 MYO1BO43795 1136 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 KCNJ4P48050 445 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 TPM4P67936 248 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 FERMT3Q86UX7 667 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 FBXL16Q8N461 479 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 CHMP4CQ96CF2 233 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 PPP1R13BQ96KQ4 1090 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 ARGLU1Q9NWB6 273 aaPredicted RBP9.27□□□□□ -0.93
VTI1A-202ENST00000432306 SALL1Q9NSC2 1324 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 WDR90Q96KV7 1748 aa9.27□□□□□ -0.93
VTI1A-202ENST00000432306 BECN2A8MW95 431 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 EFCAB8A8MWE9 144 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 CAPN2P17655 700 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 KCNQ4P56696 695 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 ETF1P62495 437 aaKnown RBP9.26□□□□□ -0.93
VTI1A-202ENST00000432306 NMIQ13287 307 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-202ENST00000432306 TMEM164Q5U3C3 297 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 MSL1Q68DK7 614 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 IQUBQ8NA54 791 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 TMX1Q9H3N1 280 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-202ENST00000432306 KDM3BQ7LBC6 1761 aa9.26□□□□□ -0.93
VTI1A-202ENST00000432306 CFAP69A5D8W1 941 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 C3orf80F5H4A9 247 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 NRDCO43847 1150 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 PFKFB2O60825 505 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 EIF4A1P60842 406 aaKnown RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 ARID5BQ14865 1188 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 TEX35Q5T0J7 233 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 TXLNBQ8N3L3 684 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 BRF1Q92994 677 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 UCN2Q96RP3 112 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 PHAXQ9H814 394 aaKnown RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 USP16Q9Y5T5 823 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 NEDD4P46934 1319 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 HEG1Q9ULI3 1381 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 PPP1R3GB7ZBB8 358 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 IKBKBO14920 756 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 TADA3O75528 432 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 TAF5LO75529 589 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 STK10O94804 968 aaKnown RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 TOMM70O94826 608 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 IFIT2P09913 472 aaKnown RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 SERPINB4P48594 390 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 MRPL58Q14197 206 aaKnown RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 CCDC158Q5M9N0 1113 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 FMR1NBQ8N0W7 255 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 ZNF396Q96N95 335 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 ALG2Q9H553 416 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 FAM217BQ9NTX9 383 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 ORC3Q9UBD5 711 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 DMGDHQ9UI17 866 aaKnown RBP9.25□□□□□ -0.93
VTI1A-202ENST00000432306 DNAI1Q9UI46 699 aa9.25□□□□□ -0.93
VTI1A-202ENST00000432306 CICQ96RK0 1608 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-202ENST00000432306 A0A0D9SFI3 127 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 LZTS3O60299 673 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-202ENST00000432306 KINO60870 393 aaKnown RBP9.24□□□□□ -0.93
VTI1A-202ENST00000432306 PTPREP23469 700 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 HNRNPH2P55795 449 aaKnown RBP9.24□□□□□ -0.93
VTI1A-202ENST00000432306 ERCC6LQ2NKX8 1250 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 ADALQ6DHV7 355 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 ARMCX5Q6P1M9 558 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 TRIM65Q6PJ69 517 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 CCDC73Q6ZRK6 1079 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 NT5DC4Q86YG4 428 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 DNAJC5GQ8N7S2 189 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 STAG1Q8WVM7 1258 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 ZNF622Q969S3 477 aaKnown RBP eCLIP9.24□□□□□ -0.93
VTI1A-202ENST00000432306 FAM227BQ96M60 508 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 NEK1Q96PY6 1258 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 GMLQ99445 158 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 TMX4Q9H1E5 349 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-202ENST00000432306 GOLPH3LQ9H4A5 285 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 COL15A1P39059 1388 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 RGPD2P0DJD1 1756 aa9.24□□□□□ -0.93
VTI1A-202ENST00000432306 UBR3Q6ZT12 1888 aa9.23□□□□□ -0.93
VTI1A-202ENST00000432306 CLGNO14967 610 aa9.23□□□□□ -0.93
VTI1A-202ENST00000432306 SFPQP23246 707 aaKnown RBP eCLIP9.23□□□□□ -0.93
VTI1A-202ENST00000432306 EVCP57679 992 aa9.23□□□□□ -0.93
VTI1A-202ENST00000432306 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-202ENST00000432306 TMCO3Q6UWJ1 677 aa9.23□□□□□ -0.93
VTI1A-202ENST00000432306 NSUN7Q8NE18 718 aaKnown RBP9.23□□□□□ -0.93
VTI1A-202ENST00000432306 MPHOSPH8Q99549 860 aa9.23□□□□□ -0.93
VTI1A-202ENST00000432306 OSBPL2Q9H1P3 480 aa9.23□□□□□ -0.93
VTI1A-202ENST00000432306 RTEL1Q9NZ71 1219 aa9.23□□□□□ -0.93
VTI1A-202ENST00000432306 TCEAL9Q9UHQ7 104 aa9.23□□□□□ -0.93
VTI1A-202ENST00000432306 FEZ2Q9UHY8 353 aaPredicted RBP9.23□□□□□ -0.93
VTI1A-202ENST00000432306 PI4KAP2A4QPH2 592 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 GOLGA6L9A6NEM1 432 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 SASH1O94885 1247 aa9.22□□□□□ -0.93
VTI1A-202ENST00000432306 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms