RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 SLC4A4Q9Y6R1 1079 aa20.71■□□□□ 0.91
LMCD1-204ENST00000426878 GNAT2P19087 354 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 CCDC84Q86UT8 332 aaPredicted RBP20.7■□□□□ 0.9
LMCD1-204ENST00000426878 PLEKHM2Q8IWE5 1019 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 DDRGK1Q96HY6 314 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 ZBTB21Q9ULJ3 1066 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 SLC45A1Q9Y2W3 748 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 TRIM75PA6NK02 468 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 TLR2O60603 784 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 SHMT1P34896 483 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 SPP2Q13103 211 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 ZMYM1Q5SVZ6 1142 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 C12orf60Q5U649 245 aa20.7■□□□□ 0.9
LMCD1-204ENST00000426878 BAZ2AQ9UIF9 1905 aaKnown RBP20.69■□□□□ 0.9
LMCD1-204ENST00000426878 PDHXO00330 501 aa20.69■□□□□ 0.9
LMCD1-204ENST00000426878 GPAA1O43292 621 aa20.69■□□□□ 0.9
LMCD1-204ENST00000426878 GDF11O95390 407 aa20.69■□□□□ 0.9
LMCD1-204ENST00000426878 CERKLQ49MI3 558 aaPredicted RBP20.69■□□□□ 0.9
LMCD1-204ENST00000426878 SH3D19Q5HYK7 790 aa20.69■□□□□ 0.9
LMCD1-204ENST00000426878 IFFO2Q5TF58 517 aa20.69■□□□□ 0.9
LMCD1-204ENST00000426878 CTU1Q7Z7A3 348 aaKnown RBP20.69■□□□□ 0.9
LMCD1-204ENST00000426878 AMOTL1Q8IY63 956 aa20.69■□□□□ 0.9
LMCD1-204ENST00000426878 SWAP70Q9UH65 585 aa20.69■□□□□ 0.9
LMCD1-204ENST00000426878 GSG1L2A8MUP6 293 aa20.68■□□□□ 0.9
LMCD1-204ENST00000426878 USP17L12C9JPN9 530 aa20.68■□□□□ 0.9
LMCD1-204ENST00000426878 USP17L21D6R901 530 aa20.68■□□□□ 0.9
LMCD1-204ENST00000426878 CYP2D6P10635 497 aa20.68■□□□□ 0.9
LMCD1-204ENST00000426878 PROCA1Q8NCQ7 364 aaPredicted RBP20.68■□□□□ 0.9
LMCD1-204ENST00000426878 MCOLN1Q9GZU1 580 aa20.68■□□□□ 0.9
LMCD1-204ENST00000426878 M0R2C6 588 aa20.67■□□□□ 0.9
LMCD1-204ENST00000426878 GH2P01242 217 aa20.67■□□□□ 0.9
LMCD1-204ENST00000426878 SP3Q02447 781 aa20.67■□□□□ 0.9
LMCD1-204ENST00000426878 EVX2Q03828 476 aa20.67■□□□□ 0.9
LMCD1-204ENST00000426878 DGKZQ13574 1117 aa20.67■□□□□ 0.9
LMCD1-204ENST00000426878 SHROOM1Q2M3G4 852 aaPredicted RBP20.67■□□□□ 0.9
LMCD1-204ENST00000426878 SBK1Q52WX2 424 aa20.67■□□□□ 0.9
LMCD1-204ENST00000426878 CTR9Q6PD62 1173 aa20.67■□□□□ 0.9
LMCD1-204ENST00000426878 ARPP21Q9UBL0 812 aaPredicted RBP20.67■□□□□ 0.9
LMCD1-204ENST00000426878 BACE1P56817 501 aa20.66■□□□□ 0.9
LMCD1-204ENST00000426878 PKN2Q16513 984 aaKnown RBP20.66■□□□□ 0.9
LMCD1-204ENST00000426878 ABCB5Q2M3G0 1257 aa20.66■□□□□ 0.9
LMCD1-204ENST00000426878 GADL1Q6ZQY3 521 aa20.66■□□□□ 0.9
LMCD1-204ENST00000426878 ERO1AQ96HE7 468 aa20.66■□□□□ 0.9
LMCD1-204ENST00000426878 AGTPBP1Q9UPW5 1226 aa20.66■□□□□ 0.9
LMCD1-204ENST00000426878 C19orf81C9J6K1 198 aa20.65■□□□□ 0.9
LMCD1-204ENST00000426878 PATL2C9JE40 543 aaKnown RBP20.65■□□□□ 0.9
LMCD1-204ENST00000426878 C17orf99Q6UX52 265 aa20.65■□□□□ 0.9
LMCD1-204ENST00000426878 SEC62Q99442 399 aaKnown RBP20.65■□□□□ 0.9
LMCD1-204ENST00000426878 PARK7Q99497 189 aaKnown RBP20.65■□□□□ 0.9
LMCD1-204ENST00000426878 CABP5Q9NP86 173 aa20.65■□□□□ 0.9
LMCD1-204ENST00000426878 ADGRA2Q96PE1 1338 aa20.65■□□□□ 0.9
LMCD1-204ENST00000426878 LOC285556D6RIA3 1793 aa20.64■□□□□ 0.9
LMCD1-204ENST00000426878 USP17L10C9JJH3 530 aa20.64■□□□□ 0.89
LMCD1-204ENST00000426878 HMGCS2P54868 508 aa20.64■□□□□ 0.89
LMCD1-204ENST00000426878 C16orf86Q6ZW13 317 aa20.64■□□□□ 0.89
LMCD1-204ENST00000426878 DYNLL2Q96FJ2 89 aa20.64■□□□□ 0.89
LMCD1-204ENST00000426878 HELLSQ9NRZ9 838 aa20.64■□□□□ 0.89
LMCD1-204ENST00000426878 CYP2D7A0A087X1C5 515 aa20.63■□□□□ 0.89
LMCD1-204ENST00000426878 MTMR2Q13614 643 aa20.63■□□□□ 0.89
LMCD1-204ENST00000426878 SLC44A5Q8NCS7 719 aa20.63■□□□□ 0.89
LMCD1-204ENST00000426878 ABHD8Q96I13 439 aa20.63■□□□□ 0.89
LMCD1-204ENST00000426878 CCDC17Q96LX7 622 aa20.63■□□□□ 0.89
LMCD1-204ENST00000426878 EPB41L4AQ9HCS5 686 aaPredicted RBP20.63■□□□□ 0.89
LMCD1-204ENST00000426878 GUCY1A2P33402 732 aa20.62■□□□□ 0.89
LMCD1-204ENST00000426878 CDK8P49336 464 aa20.62■□□□□ 0.89
LMCD1-204ENST00000426878 TREML2Q5T2D2 321 aa20.62■□□□□ 0.89
LMCD1-204ENST00000426878 IFNL3Q8IZI9 196 aa20.62■□□□□ 0.89
LMCD1-204ENST00000426878 TRIM6-TRIM34B2RNG4 842 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 SMIM22K7EJ46 135 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 PDE4AP27815 886 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 PABPC4Q13310 644 aaKnown RBP eCLIP20.61■□□□□ 0.89
LMCD1-204ENST00000426878 RAB3GAP1Q15042 981 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 CD99L2Q8TCZ2 262 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 NACAP1Q9BZK3 213 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 PNMA3Q9UL41 463 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 ROBO3Q96MS0 1386 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 APPP05067 770 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 CYP2C8P10632 490 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 HOXA7P31268 230 aaPredicted RBP20.61■□□□□ 0.89
LMCD1-204ENST00000426878 ARHGEF6Q15052 776 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 TMEM179Q6ZVK1 233 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 OTOP1Q7RTM1 612 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 C12orf42Q96LP6 360 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 KIAA1683Q9H0B3 1180 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 TMOD4Q9NZQ9 345 aa20.61■□□□□ 0.89
LMCD1-204ENST00000426878 MYH8P13535 1937 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 BCRP11274 1271 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 TDO2P48775 406 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 SEPT2Q15019 361 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 USP17L2Q6R6M4 530 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 RILPL2Q969X0 211 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 EMILIN3Q9NT22 766 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 CPA4Q9UI42 421 aa20.6■□□□□ 0.89
LMCD1-204ENST00000426878 MPHOSPH10O00566 681 aaKnown RBP20.59■□□□□ 0.89
LMCD1-204ENST00000426878 FOXP2O15409 715 aa20.59■□□□□ 0.89
LMCD1-204ENST00000426878 USP14P54578 494 aa20.59■□□□□ 0.89
LMCD1-204ENST00000426878 LACTBP83111 547 aaPredicted RBP20.59■□□□□ 0.89
LMCD1-204ENST00000426878 FBXO46Q6PJ61 603 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms