RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 SKIDA1Q1XH10 827 aa18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 IGDCC4Q8TDY8 1250 aa18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 NAPGQ99747 312 aaPredicted RBP18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 SCN11AQ9UI33 1791 aa18.94■□□□□ 0.62
NPC1L1-203ENST00000423141 AFMP43652 599 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 TTC31Q49AM3 519 aaPredicted RBP18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 ICE2Q659A1 982 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 CCDC82Q8N4S0 544 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 GOLGA6L1Q8N7Z2 621 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 ZBTB3Q9H5J0 574 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 LY9Q9HBG7 655 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 A0A087X0B3 334 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 CIAO1O76071 339 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 ERCC5P28715 1186 aaPredicted RBP18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 ARHGAP25P42331 645 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 ZC3H6P61129 1189 aaKnown RBP18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 SPATA20Q8TB22 786 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 ORAI2Q96SN7 254 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 SYNRGQ9UMZ2 1314 aa18.93■□□□□ 0.62
NPC1L1-203ENST00000423141 NOM1Q5C9Z4 860 aaKnown RBP18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 CMTR1Q8N1G2 835 aaKnown RBP18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 TRIML1Q8N9V2 468 aa18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 CSRNP2Q9H175 543 aa18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 RNF40O75150 1001 aa18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 MMP1P03956 469 aa18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 CCT6AP40227 531 aaKnown RBP18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 GTF2A1P52655 376 aaPredicted RBP18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 SPATA1Q5VX52 437 aa18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 THEMISQ8N1K5 641 aaPredicted RBP18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 TMEM94Q12767 1356 aa18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 MAP3K15Q6ZN16 1313 aa18.92■□□□□ 0.62
NPC1L1-203ENST00000423141 SYF2O95926 243 aaKnown RBP18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 SSRP1Q08945 709 aaKnown RBP18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 CUL4BQ13620 913 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 WHAMMP3Q1A5X7 153 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 TMEM67Q5HYA8 995 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 RIN2Q8WYP3 895 aaPredicted RBP18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 GDAP1L1Q96MZ0 367 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 TRIM10Q9UDY6 481 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 RGPD5Q99666 1765 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 MYH8P13535 1937 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 CORO7P57737 925 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 AMPD2Q01433 879 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 CDKAL1Q5VV42 579 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 OXER1Q8TDS5 423 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 MKRN1Q9UHC7 482 aaKnown RBP18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 TTF2Q9UNY4 1162 aaKnown RBP18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 CAMTA1Q9Y6Y1 1673 aa18.91■□□□□ 0.62
NPC1L1-203ENST00000423141 AKAP17AQ02040 695 aaKnown RBP18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 DPYDQ12882 1025 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 SLF1Q9BQI6 1058 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 MCAMP43121 646 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 PIP4K2BP78356 416 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 EPSTI1Q96J88 318 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 GBP3Q9H0R5 595 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 HDAC6Q9UBN7 1215 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 WWC3Q9ULE0 1092 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 MYO6Q9UM54 1294 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 JRKLQ9Y4A0 524 aa18.9■□□□□ 0.62
NPC1L1-203ENST00000423141 ENC1O14682 589 aa18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 CYP27B1O15528 508 aa18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 FMNL1O95466 1100 aaPredicted RBP18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 TUBB2AQ13885 445 aa18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 CTR9Q6PD62 1173 aa18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 CNGA4Q8IV77 575 aa18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 TUBB2BQ9BVA1 445 aa18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 MED4Q9NPJ6 270 aa18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 MEGF6O75095 1541 aa18.89■□□□□ 0.62
NPC1L1-203ENST00000423141 LMTK3Q96Q04 1460 aa18.89■□□□□ 0.61
NPC1L1-203ENST00000423141 TJP1Q07157 1748 aa18.89■□□□□ 0.61
NPC1L1-203ENST00000423141 ABHD10Q9NUJ1 306 aa18.89■□□□□ 0.61
NPC1L1-203ENST00000423141 SRPRBQ9Y5M8 271 aaKnown RBP18.89■□□□□ 0.61
NPC1L1-203ENST00000423141 SLC12A7Q9Y666 1083 aa18.89■□□□□ 0.61
NPC1L1-203ENST00000423141 TACC3Q9Y6A5 838 aa18.89■□□□□ 0.61
NPC1L1-203ENST00000423141 FAM205CA6NFA0 338 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 PRPF6O94906 941 aaKnown RBP18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 TATP17735 454 aaPredicted RBP18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 CCDC57Q2TAC2 916 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 WDR93Q6P2C0 686 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 IFNL2Q8IZJ0 200 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 TFR2Q9UP52 801 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 ZMYND10O75800 440 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 A1BGP04217 495 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 ADD2P35612 726 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 SAFBQ15424 915 aaKnown RBP eCLIP18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 RILPL1Q5EBL4 403 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 STAMQ92783 540 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 TMEM87BQ96K49 555 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 TOMM22Q9NS69 142 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 PPP1R3GB7ZBB8 358 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 FECHP22830 423 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 CTDSPL2Q05D32 466 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 SGMS1Q86VZ5 419 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 AFAP1L1Q8TED9 768 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 CABP5Q9NP86 173 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 ZSWIM5Q9P217 1185 aa18.88■□□□□ 0.61
NPC1L1-203ENST00000423141 IFIT3O14879 490 aaKnown RBP18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 SRGAP2O75044 1071 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms