RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 C12orf60Q5U649 245 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 TTC6Q86TZ1 520 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 ERO1BQ86YB8 467 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 FOXP4Q8IVH2 680 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-202ENST00000412686 IFNL3Q8IZI9 196 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 TRIM34Q9BYJ4 488 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 EHD4Q9H223 541 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 HELLSQ9NRZ9 838 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 WBP1LQ9NX94 342 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 PPP4R2Q9NY27 417 aa9.25□□□□□ -0.93
CPSF4-202ENST00000412686 PATL2C9JE40 543 aaKnown RBP9.24□□□□□ -0.93
CPSF4-202ENST00000412686 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
CPSF4-202ENST00000412686 CTNND1O60716 968 aaKnown RBP9.24□□□□□ -0.93
CPSF4-202ENST00000412686 ZBTB48P10074 688 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-202ENST00000412686 TDO2P48775 406 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 DGKZQ13574 1117 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 MCMDC2Q4G0Z9 681 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 TATDN1Q6P1N9 297 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 BRI3BPQ8WY22 251 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 MS4A4AQ96JQ5 239 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 PTPN18Q99952 460 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 PICK1Q9NRD5 415 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 DIAPH3Q9NSV4 1193 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 FARP1Q9Y4F1 1045 aaPredicted RBP9.24□□□□□ -0.93
CPSF4-202ENST00000412686 ZHX2Q9Y6X8 837 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 CCDC171Q6TFL3 1326 aa9.24□□□□□ -0.93
CPSF4-202ENST00000412686 CCL15-CCL14A0A0B4J2E2 113 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 MANSC4A6NHS7 340 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-202ENST00000412686 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 GH2P01242 217 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 AKR1B1P15121 316 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 GNAT2P19087 354 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 GUCY1A2P33402 732 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 MAP2K1Q02750 393 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-202ENST00000412686 PPATQ06203 517 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 PPIL2Q13356 520 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 CCL15Q16663 113 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 CLEC10AQ8IUN9 316 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 DDRGK1Q96HY6 314 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 NAPBQ9H115 298 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 R3HDMLQ9H3Y0 253 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 RNF186Q9NXI6 227 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 ARPP21Q9UBL0 812 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-202ENST00000412686 ZBTB21Q9ULJ3 1066 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 AFG3L2Q9Y4W6 797 aa9.23□□□□□ -0.93
CPSF4-202ENST00000412686 PRDM1O75626 825 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 TRPA1O75762 1119 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 TBC1D8O95759 1140 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 HSPD1P10809 573 aaKnown RBP9.22□□□□□ -0.93
CPSF4-202ENST00000412686 HSPA8P11142 646 aaKnown RBP9.22□□□□□ -0.93
CPSF4-202ENST00000412686 CHMLP26374 656 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 TM4SF4P48230 202 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 CDK8P49336 464 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 SREBF2Q12772 1141 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 SPP2Q13103 211 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 MOGSQ13724 837 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 CERKLQ49MI3 558 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-202ENST00000412686 SBK1Q52WX2 424 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 ERICH6BQ5W0A0 696 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 GIMAP6Q6P9H5 292 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 C16orf86Q6ZW13 317 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 IFNL1Q8IU54 200 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 FAM43AQ8N2R8 423 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 INCENPQ9NQS7 918 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 KCNH4Q9UQ05 1017 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 TACC3Q9Y6A5 838 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 ROBO3Q96MS0 1386 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 LOC285556D6RIA3 1793 aa9.22□□□□□ -0.93
CPSF4-202ENST00000412686 GREB1LQ9C091 1923 aaPredicted RBP9.21□□□□□ -0.93
CPSF4-202ENST00000412686 TESPA1A2RU30 521 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-202ENST00000412686 BTBD19C9JJ37 291 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 MPHOSPH10O00566 681 aaKnown RBP9.21□□□□□ -0.94
CPSF4-202ENST00000412686 ASNSP08243 561 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 GTF2A2P52657 109 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 LBX1P52954 281 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 HAND2P61296 217 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 CTDSPL2Q05D32 466 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 PPARAQ07869 468 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 SNAPC2Q13487 334 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 SEPT2Q15019 361 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 RAB3GAP1Q15042 981 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 ABCB5Q2M3G0 1257 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 AMOTL1Q8IY63 956 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 NKX2-3Q8TAU0 364 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 ACER1Q8TDN7 264 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 BEGAINQ9BUH8 593 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 NACAP1Q9BZK3 213 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 CEP350Q5VT06 3117 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 LAMA4Q16363 1823 aa9.21□□□□□ -0.94
CPSF4-202ENST00000412686 A0A0G2JLL6 359 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-202ENST00000412686 USP17L5A8MUK1 530 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 HIP1O00291 1037 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 FGAP02671 866 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 CETPP11597 493 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 RASA1P20936 1047 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-202ENST00000412686 HMGCS2P54868 508 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 MTMR2Q13614 643 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 ZYXQ15942 572 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms