RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 A0A0G2JMZ2 1700 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 ZNFX1Q9P2E3 1918 aaKnown RBP11.1□□□□□ -0.63
BRCC3-207ENST00000411985 USP17L5A8MUK1 530 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 GDF11O95390 407 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 ASNSP08243 561 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 ARHGEF6Q15052 776 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 ZSCAN25Q6NSZ9 544 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 TTC6Q86TZ1 520 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 PROCA1Q8NCQ7 364 aaPredicted RBP11.1□□□□□ -0.63
BRCC3-207ENST00000411985 ZNF280CQ8ND82 737 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 EFCC1Q9HA90 598 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 GINM1Q9NU53 330 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 SERPINB13Q9UIV8 391 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 PTPN22Q9Y2R2 807 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 SLC45A1Q9Y2W3 748 aa11.1□□□□□ -0.63
BRCC3-207ENST00000411985 TTC41PQ6P2S7 1318 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 POLR3DP05423 398 aaPredicted RBP11.09□□□□□ -0.63
BRCC3-207ENST00000411985 CYP2C8P10632 490 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 LACTBP83111 547 aaPredicted RBP11.09□□□□□ -0.63
BRCC3-207ENST00000411985 CAP1Q01518 475 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 SPP2Q13103 211 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 AAMPQ13685 434 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 KIF22Q14807 665 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 UBE3CQ15386 1083 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 TATDN1Q6P1N9 297 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 C17orf99Q6UX52 265 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 ARMT1Q9H993 441 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 ZBTB21Q9ULJ3 1066 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 AGTPBP1Q9UPW5 1226 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 LAMA4Q16363 1823 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 FRMPD3Q5JV73 1810 aa11.09□□□□□ -0.63
BRCC3-207ENST00000411985 ERC2O15083 957 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 MBD4O95243 580 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 PLCD1P51178 756 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 HMGCS2P54868 508 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 JAG1P78504 1218 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 HDAC1Q13547 482 aaPredicted RBP11.08□□□□□ -0.64
BRCC3-207ENST00000411985 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 TREML2Q5T2D2 321 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 KBTBD3Q8NAB2 608 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 WDR18Q9BV38 432 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
BRCC3-207ENST00000411985 MCM9Q9NXL9 1143 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
BRCC3-207ENST00000411985 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 PLXNA1Q9UIW2 1896 aa11.08□□□□□ -0.64
BRCC3-207ENST00000411985 MKI67P46013 3256 aaKnown RBP11.07□□□□□ -0.64
BRCC3-207ENST00000411985 GNRH1P01148 92 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 CHGBP05060 677 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 BCRP11274 1271 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 RGS19P49795 217 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 SOX10P56693 466 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 MTMR2Q13614 643 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 SHROOM1Q2M3G4 852 aaPredicted RBP11.07□□□□□ -0.64
BRCC3-207ENST00000411985 CERKLQ49MI3 558 aaPredicted RBP11.07□□□□□ -0.64
BRCC3-207ENST00000411985 PI4K2BQ8TCG2 481 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 SMCR8Q8TEV9 937 aaPredicted RBP11.07□□□□□ -0.64
BRCC3-207ENST00000411985 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 PUS7LQ9H0K6 701 aaKnown RBP11.07□□□□□ -0.64
BRCC3-207ENST00000411985 ATP8A2Q9NTI2 1148 aa11.07□□□□□ -0.64
BRCC3-207ENST00000411985 C19orf81C9J6K1 198 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 USP17L10C9JJH3 530 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 PRKAB2O43741 272 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 GLRX3O76003 335 aaKnown RBP11.06□□□□□ -0.64
BRCC3-207ENST00000411985 GH2P01242 217 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 MX1P20591 662 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 SHMT1P34896 483 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 BACE1P56817 501 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 GABPAQ06546 454 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 PABPC4Q13310 644 aaKnown RBP eCLIP11.06□□□□□ -0.64
BRCC3-207ENST00000411985 ABCB5Q2M3G0 1257 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 SPDYE1Q8NFV5 336 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-207ENST00000411985 OTUD7AQ8TE49 926 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-207ENST00000411985 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 TMOD4Q9NZQ9 345 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 SLC4A4Q9Y6R1 1079 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 SALL3Q9BXA9 1300 aa11.06□□□□□ -0.64
BRCC3-207ENST00000411985 ECM2O94769 699 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-207ENST00000411985 ZFYP08048 801 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-207ENST00000411985 OSBPP22059 807 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 CTGFP29279 349 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 PSMC4P43686 418 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 PRMT2P55345 433 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 MLLT1Q03111 559 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-207ENST00000411985 EVX2Q03828 476 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 LRRFIP1Q32MZ4 808 aaKnown RBP11.05□□□□□ -0.64
BRCC3-207ENST00000411985 AMOTL1Q8IY63 956 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 APPBP2Q92624 585 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 CABP5Q9NP86 173 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 SWAP70Q9UH65 585 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 PTCH2Q9Y6C5 1203 aa11.05□□□□□ -0.64
BRCC3-207ENST00000411985 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms