RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 APPP05067 770 aa26.76■■□□□ 1.87
PTCD3-203ENST00000409783 INHBEP58166 350 aa26.76■■□□□ 1.87
PTCD3-203ENST00000409783 SREBF2Q12772 1141 aa26.76■■□□□ 1.87
PTCD3-203ENST00000409783 CWC27Q6UX04 472 aaKnown RBP26.76■■□□□ 1.87
PTCD3-203ENST00000409783 AFG3L2Q9Y4W6 797 aa26.76■■□□□ 1.87
PTCD3-203ENST00000409783 ZHX2Q9Y6X8 837 aa26.76■■□□□ 1.87
PTCD3-203ENST00000409783 ROBO3Q96MS0 1386 aa26.75■■□□□ 1.87
PTCD3-203ENST00000409783 GTF2A2P52657 109 aa26.75■■□□□ 1.87
PTCD3-203ENST00000409783 C16orf86Q6ZW13 317 aa26.75■■□□□ 1.87
PTCD3-203ENST00000409783 BRI3BPQ8WY22 251 aa26.75■■□□□ 1.87
PTCD3-203ENST00000409783 PTPN18Q99952 460 aa26.75■■□□□ 1.87
PTCD3-203ENST00000409783 IL25Q9H293 177 aa26.75■■□□□ 1.87
PTCD3-203ENST00000409783 GINM1Q9NU53 330 aa26.75■■□□□ 1.87
PTCD3-203ENST00000409783 ZBTB21Q9ULJ3 1066 aa26.75■■□□□ 1.87
PTCD3-203ENST00000409783 IGF2BP3O00425 579 aaKnown RBP eCLIP26.74■■□□□ 1.87
PTCD3-203ENST00000409783 FOXN1O15353 648 aa26.74■■□□□ 1.87
PTCD3-203ENST00000409783 CHMLP26374 656 aa26.74■■□□□ 1.87
PTCD3-203ENST00000409783 TDO2P48775 406 aa26.74■■□□□ 1.87
PTCD3-203ENST00000409783 ALX1Q15699 326 aa26.74■■□□□ 1.87
PTCD3-203ENST00000409783 AMOTL1Q8IY63 956 aa26.74■■□□□ 1.87
PTCD3-203ENST00000409783 NACAP1Q9BZK3 213 aa26.74■■□□□ 1.87
PTCD3-203ENST00000409783 RNF186Q9NXI6 227 aa26.74■■□□□ 1.87
PTCD3-203ENST00000409783 SWAP70Q9UH65 585 aa26.74■■□□□ 1.87
PTCD3-203ENST00000409783 CXCL11O14625 94 aa26.73■■□□□ 1.87
PTCD3-203ENST00000409783 ASNSP08243 561 aa26.73■■□□□ 1.87
PTCD3-203ENST00000409783 HSPD1P10809 573 aaKnown RBP26.73■■□□□ 1.87
PTCD3-203ENST00000409783 CDK8P49336 464 aa26.73■■□□□ 1.87
PTCD3-203ENST00000409783 SNAPC2Q13487 334 aa26.73■■□□□ 1.87
PTCD3-203ENST00000409783 MOGSQ13724 837 aa26.73■■□□□ 1.87
PTCD3-203ENST00000409783 CERKLQ49MI3 558 aaPredicted RBP26.73■■□□□ 1.87
PTCD3-203ENST00000409783 IFNL1Q8IU54 200 aa26.73■■□□□ 1.87
PTCD3-203ENST00000409783 CCL15-CCL14A0A0B4J2E2 113 aa26.72■■□□□ 1.87
PTCD3-203ENST00000409783 MINDY4BA8MYZ0 360 aa26.72■■□□□ 1.87
PTCD3-203ENST00000409783 CCL15Q16663 113 aa26.72■■□□□ 1.87
PTCD3-203ENST00000409783 BMP2KLQ5H9B9 411 aa26.72■■□□□ 1.87
PTCD3-203ENST00000409783 NAPBQ9H115 298 aa26.72■■□□□ 1.87
PTCD3-203ENST00000409783 USP17L5A8MUK1 530 aa26.71■■□□□ 1.87
PTCD3-203ENST00000409783 GH2P01242 217 aa26.71■■□□□ 1.87
PTCD3-203ENST00000409783 CETPP11597 493 aa26.71■■□□□ 1.87
PTCD3-203ENST00000409783 SAGE1Q9NXZ1 904 aa26.71■■□□□ 1.87
PTCD3-203ENST00000409783 CA12O43570 354 aa26.7■■□□□ 1.86
PTCD3-203ENST00000409783 GUCY1A2P33402 732 aa26.7■■□□□ 1.86
PTCD3-203ENST00000409783 ABCB5Q2M3G0 1257 aa26.7■■□□□ 1.86
PTCD3-203ENST00000409783 BEGAINQ9BUH8 593 aa26.7■■□□□ 1.86
PTCD3-203ENST00000409783 WDR18Q9BV38 432 aa26.7■■□□□ 1.86
PTCD3-203ENST00000409783 TBC1D2Q9BYX2 928 aa26.7■■□□□ 1.86
PTCD3-203ENST00000409783 ZMYM6O95789 1325 aa26.69■■□□□ 1.86
PTCD3-203ENST00000409783 GREB1LQ9C091 1923 aaPredicted RBP26.69■■□□□ 1.86
PTCD3-203ENST00000409783 A0A0G2JLL6 359 aaPredicted RBP26.69■■□□□ 1.86
PTCD3-203ENST00000409783 TRPA1O75762 1119 aa26.69■■□□□ 1.86
PTCD3-203ENST00000409783 FGAP02671 866 aa26.69■■□□□ 1.86
PTCD3-203ENST00000409783 MFAP1P55081 439 aaKnown RBP26.69■■□□□ 1.86
PTCD3-203ENST00000409783 PRRT2Q7Z6L0 340 aaPredicted RBP26.69■■□□□ 1.86
PTCD3-203ENST00000409783 ZNF280CQ8ND82 737 aa26.69■■□□□ 1.86
PTCD3-203ENST00000409783 HSPA8P11142 646 aaKnown RBP26.68■■□□□ 1.86
PTCD3-203ENST00000409783 PPARAQ07869 468 aa26.68■■□□□ 1.86
PTCD3-203ENST00000409783 SPP2Q13103 211 aa26.68■■□□□ 1.86
PTCD3-203ENST00000409783 FAM43AQ8N2R8 423 aa26.68■■□□□ 1.86
PTCD3-203ENST00000409783 RAD50Q92878 1312 aa26.67■■□□□ 1.86
PTCD3-203ENST00000409783 LOC285556D6RIA3 1793 aa26.67■■□□□ 1.86
PTCD3-203ENST00000409783 TRIM75PA6NK02 468 aa26.67■■□□□ 1.86
PTCD3-203ENST00000409783 BTBD19C9JJ37 291 aa26.67■■□□□ 1.86
PTCD3-203ENST00000409783 AKR1B1P15121 316 aa26.67■■□□□ 1.86
PTCD3-203ENST00000409783 CFHR5Q9BXR6 569 aa26.67■■□□□ 1.86
PTCD3-203ENST00000409783 TSKSQ9UJT2 592 aa26.67■■□□□ 1.86
PTCD3-203ENST00000409783 ANAPC4Q9UJX5 808 aa26.67■■□□□ 1.86
PTCD3-203ENST00000409783 RASA1P20936 1047 aa26.66■■□□□ 1.86
PTCD3-203ENST00000409783 GPAT2Q6NUI2 795 aa26.66■■□□□ 1.86
PTCD3-203ENST00000409783 STK11IPQ8N1F8 1099 aa26.66■■□□□ 1.86
PTCD3-203ENST00000409783 CCDC17Q96LX7 622 aa26.66■■□□□ 1.86
PTCD3-203ENST00000409783 AS3MTQ9HBK9 375 aa26.66■■□□□ 1.86
PTCD3-203ENST00000409783 CABP5Q9NP86 173 aa26.66■■□□□ 1.86
PTCD3-203ENST00000409783 TACC3Q9Y6A5 838 aa26.66■■□□□ 1.86
PTCD3-203ENST00000409783 ALDH1A1P00352 501 aa26.65■■□□□ 1.86
PTCD3-203ENST00000409783 CTCFP49711 727 aaPredicted RBP26.65■■□□□ 1.86
PTCD3-203ENST00000409783 SEPT2Q15019 361 aa26.65■■□□□ 1.86
PTCD3-203ENST00000409783 SH3D19Q5HYK7 790 aa26.65■■□□□ 1.86
PTCD3-203ENST00000409783 DSCC1Q9BVC3 393 aa26.65■■□□□ 1.86
PTCD3-203ENST00000409783 R3HDMLQ9H3Y0 253 aa26.65■■□□□ 1.86
PTCD3-203ENST00000409783 LAMA4Q16363 1823 aa26.65■■□□□ 1.86
PTCD3-203ENST00000409783 SGSM2O43147 1006 aa26.64■■□□□ 1.86
PTCD3-203ENST00000409783 CTDSPL2Q05D32 466 aa26.64■■□□□ 1.86
PTCD3-203ENST00000409783 RAB3GAP1Q15042 981 aa26.64■■□□□ 1.86
PTCD3-203ENST00000409783 TMEM179Q6ZVK1 233 aa26.64■■□□□ 1.86
PTCD3-203ENST00000409783 ANKRD23Q86SG2 305 aa26.64■■□□□ 1.86
PTCD3-203ENST00000409783 RUFY2Q8WXA3 655 aa26.64■■□□□ 1.86
PTCD3-203ENST00000409783 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.64■■□□□ 1.86
PTCD3-203ENST00000409783 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.64■■□□□ 1.86
PTCD3-203ENST00000409783 BACE1P56817 501 aa26.63■■□□□ 1.85
PTCD3-203ENST00000409783 OTUD7BQ6GQQ9 843 aa26.63■■□□□ 1.85
PTCD3-203ENST00000409783 ZCCHC17Q9NP64 241 aaKnown RBP26.63■■□□□ 1.85
PTCD3-203ENST00000409783 MPHOSPH10O00566 681 aaKnown RBP26.62■■□□□ 1.85
PTCD3-203ENST00000409783 PRDM1O75626 825 aa26.62■■□□□ 1.85
PTCD3-203ENST00000409783 TBC1D8O95759 1140 aa26.62■■□□□ 1.85
PTCD3-203ENST00000409783 DGKZQ13574 1117 aa26.62■■□□□ 1.85
PTCD3-203ENST00000409783 FASTKD5Q7L8L6 764 aaKnown RBP26.62■■□□□ 1.85
PTCD3-203ENST00000409783 SIAH1Q8IUQ4 282 aa26.62■■□□□ 1.85
PTCD3-203ENST00000409783 NBPF3Q9H094 633 aa26.62■■□□□ 1.85
PTCD3-203ENST00000409783 USP17L10C9JJH3 530 aa26.61■■□□□ 1.85
PTCD3-203ENST00000409783 FGRP09769 529 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms