RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 RBM28Q9NW13 759 aaKnown RBP19.34■□□□□ 0.69
NUP50-203ENST00000407019 PCDHB6Q9Y5E3 794 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 COL24A1Q17RW2 1714 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 RPS6KA4O75676 772 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 CALM1P0DP23 149 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 CALM2P0DP24 149 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 CALM3P0DP25 149 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 LMOD1P29536 600 aaPredicted RBP19.34■□□□□ 0.69
NUP50-203ENST00000407019 FANCCQ00597 558 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 DHX8Q14562 1220 aaKnown RBP19.34■□□□□ 0.69
NUP50-203ENST00000407019 SPECC1Q5M775 1068 aa19.34■□□□□ 0.69
NUP50-203ENST00000407019 ZNF579Q8NAF0 562 aaKnown RBP19.34■□□□□ 0.69
NUP50-203ENST00000407019 HIBADHP31937 336 aaKnown RBP19.33■□□□□ 0.69
NUP50-203ENST00000407019 MECOMQ03112 1051 aa19.33■□□□□ 0.69
NUP50-203ENST00000407019 SRP68Q9UHB9 627 aaKnown RBP19.33■□□□□ 0.69
NUP50-203ENST00000407019 PAXBP1Q9Y5B6 917 aa19.33■□□□□ 0.69
NUP50-203ENST00000407019 PCDHA5Q9Y5H7 936 aa19.33■□□□□ 0.69
NUP50-203ENST00000407019 PRPF3O43395 683 aaKnown RBP19.32■□□□□ 0.68
NUP50-203ENST00000407019 PRDM1O75626 825 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 GRIN1Q05586 938 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 VPS72Q15906 364 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 ZNF710Q8N1W2 664 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 CRNKL1Q9BZJ0 848 aaKnown RBP19.32■□□□□ 0.68
NUP50-203ENST00000407019 HSD3B7Q9H2F3 369 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 CABP5Q9NP86 173 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 BAZ2AQ9UIF9 1905 aaKnown RBP19.32■□□□□ 0.68
NUP50-203ENST00000407019 USP27XA6NNY8 438 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 USP17L12C9JPN9 530 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 USP17L21D6R901 530 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 ZPR1O75312 459 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 DDAH1O94760 285 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 PIP4K2BP78356 416 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 FUT2Q10981 343 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 PKN1Q16512 942 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 GLIPR1L2Q4G1C9 344 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 FOXP4Q8IVH2 680 aaPredicted RBP19.32■□□□□ 0.68
NUP50-203ENST00000407019 KCND1Q9NSA2 647 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 TFCP2L1Q9NZI6 479 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 VPS54Q9P1Q0 977 aa19.32■□□□□ 0.68
NUP50-203ENST00000407019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.32■□□□□ 0.68
NUP50-203ENST00000407019 SRPRBQ9Y5M8 271 aaKnown RBP19.32■□□□□ 0.68
NUP50-203ENST00000407019 DLEC1Q9Y238 1755 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 CTIFO43310 598 aaKnown RBP19.31■□□□□ 0.68
NUP50-203ENST00000407019 MYO1BO43795 1136 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 KRT2P35908 639 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 MDM2Q00987 491 aaPredicted RBP19.31■□□□□ 0.68
NUP50-203ENST00000407019 CEP135Q66GS9 1140 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 SHISA4Q96DD7 197 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 NOL10Q9BSC4 688 aaKnown RBP19.31■□□□□ 0.68
NUP50-203ENST00000407019 PHF20Q9BVI0 1012 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 GNPATO15228 680 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 FOXN1O15353 648 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 CBFA2T2O43439 604 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 ORC4O43929 436 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 PLEKHA8P1O95397 391 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 ATP1A3P13637 1013 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 ATP2B1P20020 1258 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 POSTNQ15063 836 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 PTF1AQ7RTS3 328 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 AATFQ9NY61 560 aaKnown RBP eCLIP19.31■□□□□ 0.68
NUP50-203ENST00000407019 MORC2Q9Y6X9 1032 aaPredicted RBP19.31■□□□□ 0.68
NUP50-203ENST00000407019 MAST2Q6P0Q8 1798 aa19.31■□□□□ 0.68
NUP50-203ENST00000407019 POLR2DO15514 142 aaKnown RBP19.3■□□□□ 0.68
NUP50-203ENST00000407019 SFPQP23246 707 aaKnown RBP eCLIP19.3■□□□□ 0.68
NUP50-203ENST00000407019 TROAPQ12815 778 aa19.3■□□□□ 0.68
NUP50-203ENST00000407019 TPTE2Q6XPS3 522 aa19.3■□□□□ 0.68
NUP50-203ENST00000407019 NYAP1Q6ZVC0 841 aa19.3■□□□□ 0.68
NUP50-203ENST00000407019 CCAR2Q8N163 923 aaKnown RBP19.3■□□□□ 0.68
NUP50-203ENST00000407019 DCP1AQ9NPI6 582 aaPredicted RBP19.3■□□□□ 0.68
NUP50-203ENST00000407019 ATP8A2Q9NTI2 1148 aa19.3■□□□□ 0.68
NUP50-203ENST00000407019 MYH6P13533 1939 aa19.3■□□□□ 0.68
NUP50-203ENST00000407019 MYH2Q9UKX2 1941 aa19.3■□□□□ 0.68
NUP50-203ENST00000407019 MYH13Q9UKX3 1938 aa19.3■□□□□ 0.68
NUP50-203ENST00000407019 TRIM75PA6NK02 468 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 PTPN14Q15678 1187 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 ARMCX5Q6P1M9 558 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 TMED8Q6PL24 325 aaPredicted RBP19.29■□□□□ 0.68
NUP50-203ENST00000407019 SERTAD1Q9UHV2 236 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 MAN1B1Q9UKM7 699 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 V9GY48 417 aaPredicted RBP19.29■□□□□ 0.68
NUP50-203ENST00000407019 LAMB1P07942 1786 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 NRDCO43847 1150 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 SERPINC1P01008 464 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 PRDX5P30044 214 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 UBASH3AP57075 661 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 TMTC3Q6ZXV5 915 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 C8orf37Q96NL8 207 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 BRMS1Q9HCU9 246 aa19.29■□□□□ 0.68
NUP50-203ENST00000407019 ARPP21Q9UBL0 812 aaPredicted RBP19.29■□□□□ 0.68
NUP50-203ENST00000407019 KANK3Q6NY19 840 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 CCDC112Q8NEF3 446 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 NGLY1Q96IV0 654 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 CSRNP2Q9H175 543 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 hCG_1642624A0A1W2PR95 340 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 TOM1O60784 492 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 BMP6P22004 513 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 NT5DC1Q5TFE4 455 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 CCDC24Q8N4L8 307 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 SMARCE1Q969G3 411 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 TRMT1Q9NXH9 659 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms