RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 GABPAQ06546 454 aa24.93■■□□□ 1.58
PDGFA-204ENST00000405692 RRP1BQ14684 758 aaKnown RBP24.93■■□□□ 1.58
PDGFA-204ENST00000405692 COL13A1Q5TAT6 717 aaPredicted RBP24.93■■□□□ 1.58
PDGFA-204ENST00000405692 PRRT2Q7Z6L0 340 aaPredicted RBP24.93■■□□□ 1.58
PDGFA-204ENST00000405692 ANKRD23Q86SG2 305 aa24.93■■□□□ 1.58
PDGFA-204ENST00000405692 ZFYVE28Q9HCC9 887 aa24.93■■□□□ 1.58
PDGFA-204ENST00000405692 TRIM75PA6NK02 468 aa24.92■■□□□ 1.58
PDGFA-204ENST00000405692 GSG1L2A8MUP6 293 aa24.92■■□□□ 1.58
PDGFA-204ENST00000405692 GDF11O95390 407 aa24.92■■□□□ 1.58
PDGFA-204ENST00000405692 TAF1CQ15572 869 aaPredicted RBP24.92■■□□□ 1.58
PDGFA-204ENST00000405692 SBK1Q52WX2 424 aa24.92■■□□□ 1.58
PDGFA-204ENST00000405692 CENPQQ7L2Z9 268 aaPredicted RBP24.92■■□□□ 1.58
PDGFA-204ENST00000405692 FAM43AQ8N2R8 423 aa24.92■■□□□ 1.58
PDGFA-204ENST00000405692 SEC62Q99442 399 aaKnown RBP24.92■■□□□ 1.58
PDGFA-204ENST00000405692 ZBTB21Q9ULJ3 1066 aa24.92■■□□□ 1.58
PDGFA-204ENST00000405692 BTBD19C9JJ37 291 aa24.91■■□□□ 1.58
PDGFA-204ENST00000405692 GPR25O00155 361 aa24.91■■□□□ 1.58
PDGFA-204ENST00000405692 HIP1O00291 1037 aa24.91■■□□□ 1.58
PDGFA-204ENST00000405692 TDO2P48775 406 aa24.91■■□□□ 1.58
PDGFA-204ENST00000405692 ABCB5Q2M3G0 1257 aa24.91■■□□□ 1.58
PDGFA-204ENST00000405692 CTR9Q6PD62 1173 aa24.91■■□□□ 1.58
PDGFA-204ENST00000405692 WDR18Q9BV38 432 aa24.91■■□□□ 1.58
PDGFA-204ENST00000405692 CYP2D6P10635 497 aa24.9■■□□□ 1.58
PDGFA-204ENST00000405692 PDE4AP27815 886 aa24.9■■□□□ 1.58
PDGFA-204ENST00000405692 SHMT1P34896 483 aa24.9■■□□□ 1.58
PDGFA-204ENST00000405692 SPP2Q13103 211 aa24.9■■□□□ 1.58
PDGFA-204ENST00000405692 CRHR2Q13324 411 aa24.9■■□□□ 1.58
PDGFA-204ENST00000405692 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.9■■□□□ 1.58
PDGFA-204ENST00000405692 GH2P01242 217 aa24.89■■□□□ 1.58
PDGFA-204ENST00000405692 MCMDC2Q4G0Z9 681 aa24.89■■□□□ 1.58
PDGFA-204ENST00000405692 GADL1Q6ZQY3 521 aa24.89■■□□□ 1.58
PDGFA-204ENST00000405692 CCDC84Q86UT8 332 aaPredicted RBP24.89■■□□□ 1.58
PDGFA-204ENST00000405692 CCDC17Q96LX7 622 aa24.89■■□□□ 1.58
PDGFA-204ENST00000405692 FKTNO75072 461 aa24.88■■□□□ 1.57
PDGFA-204ENST00000405692 MFAP1P55081 439 aaKnown RBP24.88■■□□□ 1.57
PDGFA-204ENST00000405692 C16orf86Q6ZW13 317 aa24.88■■□□□ 1.57
PDGFA-204ENST00000405692 IFNL3Q8IZI9 196 aa24.88■■□□□ 1.57
PDGFA-204ENST00000405692 PROCA1Q8NCQ7 364 aaPredicted RBP24.88■■□□□ 1.57
PDGFA-204ENST00000405692 ZNF287Q9HBT7 754 aa24.88■■□□□ 1.57
PDGFA-204ENST00000405692 SLC45A1Q9Y2W3 748 aa24.88■■□□□ 1.57
PDGFA-204ENST00000405692 ATAD5Q96QE3 1844 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 C19orf81C9J6K1 198 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 PDHXO00330 501 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 SDSP20132 328 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 MOGSQ13724 837 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 RAB3GAP1Q15042 981 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 TTC22Q5TAA0 569 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 ZNF296Q8WUU4 475 aaPredicted RBP24.87■■□□□ 1.57
PDGFA-204ENST00000405692 DYNLL2Q96FJ2 89 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 NAPBQ9H115 298 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 DIAPH3Q9NSV4 1193 aa24.87■■□□□ 1.57
PDGFA-204ENST00000405692 CYP2D7A0A087X1C5 515 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 MINDY4BA8MYZ0 360 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 USP17L10C9JJH3 530 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 MPHOSPH10O00566 681 aaKnown RBP24.86■■□□□ 1.57
PDGFA-204ENST00000405692 CDK8P49336 464 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 BACE1P56817 501 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 JAG1P78504 1218 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 PABPC4Q13310 644 aaKnown RBP eCLIP24.86■■□□□ 1.57
PDGFA-204ENST00000405692 SH3D19Q5HYK7 790 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 TNS4Q8IZW8 715 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 CCDC136Q96JN2 1154 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 PARK7Q99497 189 aaKnown RBP24.86■■□□□ 1.57
PDGFA-204ENST00000405692 TMOD4Q9NZQ9 345 aa24.86■■□□□ 1.57
PDGFA-204ENST00000405692 SLC3A2P08195 630 aaKnown RBP24.85■■□□□ 1.57
PDGFA-204ENST00000405692 NMIQ13287 307 aaPredicted RBP24.85■■□□□ 1.57
PDGFA-204ENST00000405692 GPAT2Q6NUI2 795 aa24.85■■□□□ 1.57
PDGFA-204ENST00000405692 TMEM179Q6ZVK1 233 aa24.85■■□□□ 1.57
PDGFA-204ENST00000405692 FAM227BQ96M60 508 aa24.85■■□□□ 1.57
PDGFA-204ENST00000405692 R3HDMLQ9H3Y0 253 aa24.85■■□□□ 1.57
PDGFA-204ENST00000405692 EPB41L4AQ9HCS5 686 aaPredicted RBP24.85■■□□□ 1.57
PDGFA-204ENST00000405692 AGTPBP1Q9UPW5 1226 aa24.85■■□□□ 1.57
PDGFA-204ENST00000405692 BAZ2AQ9UIF9 1905 aaKnown RBP24.84■■□□□ 1.57
PDGFA-204ENST00000405692 PHIPQ8WWQ0 1821 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 A0A0D9SFI3 127 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 TLR2O60603 784 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 HMGCS2P54868 508 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 EVX2Q03828 476 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 MTMR2Q13614 643 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 CCDC129Q6ZRS4 1044 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 SLC44A5Q8NCS7 719 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 PNMA3Q9UL41 463 aa24.84■■□□□ 1.57
PDGFA-204ENST00000405692 ROBO3Q96MS0 1386 aa24.83■■□□□ 1.57
PDGFA-204ENST00000405692 ERO1AQ96HE7 468 aa24.83■■□□□ 1.57
PDGFA-204ENST00000405692 FEZ1Q99689 392 aa24.83■■□□□ 1.57
PDGFA-204ENST00000405692 MKNK2Q9HBH9 465 aa24.83■■□□□ 1.57
PDGFA-204ENST00000405692 USP14P54578 494 aa24.82■■□□□ 1.56
PDGFA-204ENST00000405692 SP3Q02447 781 aa24.82■■□□□ 1.56
PDGFA-204ENST00000405692 ARHGEF6Q15052 776 aa24.82■■□□□ 1.56
PDGFA-204ENST00000405692 SHROOM1Q2M3G4 852 aaPredicted RBP24.82■■□□□ 1.56
PDGFA-204ENST00000405692 CCDC171Q6TFL3 1326 aa24.82■■□□□ 1.56
PDGFA-204ENST00000405692 PDE4BQ07343 736 aa24.81■■□□□ 1.56
PDGFA-204ENST00000405692 ALX1Q15699 326 aa24.81■■□□□ 1.56
PDGFA-204ENST00000405692 USP17L2Q6R6M4 530 aa24.81■■□□□ 1.56
PDGFA-204ENST00000405692 CTU1Q7Z7A3 348 aaKnown RBP24.81■■□□□ 1.56
PDGFA-204ENST00000405692 GSPT1P15170 499 aaKnown RBP24.8■■□□□ 1.56
PDGFA-204ENST00000405692 OSBPP22059 807 aa24.8■■□□□ 1.56
PDGFA-204ENST00000405692 SEPT2Q15019 361 aa24.8■■□□□ 1.56
PDGFA-204ENST00000405692 ERICH6BQ5W0A0 696 aa24.8■■□□□ 1.56
PDGFA-204ENST00000405692 CWC27Q6UX04 472 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms