RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 GRIN1Q05586 938 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 PPARAQ07869 468 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 CCDC152Q4G0S7 254 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 PARP10Q53GL7 1025 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 MNS1Q8NEH6 495 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 SYTL4Q96C24 671 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-204ENST00000404424 AATFQ9NY61 560 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLIP4-204ENST00000404424 BCORQ6W2J9 1755 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 PLCD1P51178 756 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 AKAP17AQ02040 695 aaKnown RBP12.27□□□□□ -0.45
CLIP4-204ENST00000404424 FMR1Q06787 632 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLIP4-204ENST00000404424 NR5A1Q13285 461 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 ARHGAP29Q52LW3 1261 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 SUSD4Q5VX71 490 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 CREBRFQ8IUR6 639 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 ESR2Q92731 530 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 ZKSCAN3Q9BRR0 538 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 LRP2BPQ9P2M1 347 aa12.27□□□□□ -0.45
CLIP4-204ENST00000404424 NPHP1O15259 732 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 URI1O94763 535 aaPredicted RBP12.26□□□□□ -0.45
CLIP4-204ENST00000404424 SLFN14P0C7P3 912 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 BCAMP50895 628 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 EIF5P55010 431 aaKnown RBP12.26□□□□□ -0.45
CLIP4-204ENST00000404424 NR1I3Q14994 352 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 TC2NQ8N9U0 490 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 NUP133Q8WUM0 1156 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 CABP5Q9NP86 173 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 ZNF446Q9NWS9 450 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 RAI14Q9P0K7 980 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 PARP3Q9Y6F1 533 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 TADA3O75528 432 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 SEC23AQ15436 765 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 TERF2Q15554 542 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 ZNF771Q7L3S4 317 aaPredicted RBP12.26□□□□□ -0.45
CLIP4-204ENST00000404424 PDILTQ8N807 584 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 CSRNP2Q9H175 543 aa12.26□□□□□ -0.45
CLIP4-204ENST00000404424 A0A1B0GTH6 734 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 TRIM75PA6NK02 468 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 EXOC5O00471 708 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 CASQ1P31415 396 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 CLCN6P51797 869 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 CCDC82Q8N4S0 544 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 LRRN4CLQ8ND94 238 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 SEC31BQ9NQW1 1179 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 RBM28Q9NW13 759 aaKnown RBP12.25□□□□□ -0.45
CLIP4-204ENST00000404424 SLIT2O94813 1529 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 SNAP23O00161 211 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 PRPF3O43395 683 aaKnown RBP12.25□□□□□ -0.45
CLIP4-204ENST00000404424 ATP8B1O43520 1251 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 GOLGA8FQ08AF8 430 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 GOLGA8DPQ0D2H9 430 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 OXER1Q8TDS5 423 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 FERMT2Q96AC1 680 aa12.25□□□□□ -0.45
CLIP4-204ENST00000404424 NAA15Q9BXJ9 866 aaKnown RBP12.25□□□□□ -0.45
CLIP4-204ENST00000404424 TNKSO95271 1327 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 PLCH1Q4KWH8 1693 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 PCP11498 1178 aaKnown RBP12.24□□□□□ -0.45
CLIP4-204ENST00000404424 CYP7A1P22680 504 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 KRT2P35908 639 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 MAP3K9P80192 1104 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 MIGA1Q8NAN2 632 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 PANX2Q96RD6 677 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 CTAGE1Q96RT6 745 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 PHF20Q9BVI0 1012 aa12.24□□□□□ -0.45
CLIP4-204ENST00000404424 SEMA3EO15041 775 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 FANCGO15287 622 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 CALM1P0DP23 149 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 CALM2P0DP24 149 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 CALM3P0DP25 149 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 SPATA1Q5VX52 437 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 SH3RF1Q7Z6J0 888 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 CMTR1Q8N1G2 835 aaKnown RBP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 GSDMAQ96QA5 445 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 MED15Q96RN5 788 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 CDC5LQ99459 802 aaKnown RBP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 CARD6Q9BX69 1037 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 BRMS1Q9HCU9 246 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 SAMSN1Q9NSI8 373 aaKnown RBP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 FHOD1Q9Y613 1164 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 NHSL1Q5SYE7 1610 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 MAGEB6P1A0A0J9YX57 407 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 ZRANB2O95218 330 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 HSPA2P54652 639 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 ADKP55263 362 aaKnown RBP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 GNG11P61952 73 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 CHRNDQ07001 517 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 PKN1Q16512 942 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 ZNF827Q17R98 1081 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 TAF3Q5VWG9 929 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 CATIPQ7Z7H3 387 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 TRMT44Q8IYL2 757 aaKnown RBP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 GRAMD1CQ8IYS0 662 aa12.23□□□□□ -0.45
CLIP4-204ENST00000404424 ZSCAN10Q96SZ4 725 aaPredicted RBP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 GNL3LQ9NVN8 582 aaKnown RBP12.23□□□□□ -0.45
CLIP4-204ENST00000404424 MINDY4BA8MYZ0 360 aa12.22□□□□□ -0.45
CLIP4-204ENST00000404424 ATP2B1P20020 1258 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms