RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 BMP6P22004 513 aa14.43□□□□□ -0.1
PPP4R1-202ENST00000400555 CRKLP46109 303 aaKnown RBP14.43□□□□□ -0.1
PPP4R1-202ENST00000400555 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
PPP4R1-202ENST00000400555 SYMPKQ92797 1274 aaKnown RBP14.43□□□□□ -0.1
PPP4R1-202ENST00000400555 DDX41Q9UJV9 622 aaKnown RBP14.43□□□□□ -0.1
PPP4R1-202ENST00000400555 STX8Q9UNK0 236 aa14.43□□□□□ -0.1
PPP4R1-202ENST00000400555 A0A0U1RQG5 324 aaPredicted RBP14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 CCP110O43303 1012 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 CLCN6P51797 869 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 FAM182BQ5T319 152 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 VSTM4Q8IW00 320 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 CPDO75976 1380 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 MROH5Q6ZUA9 1318 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 KRT2P35908 639 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 SPECC1LQ69YQ0 1117 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 ADGRA1Q86SQ6 560 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 GPKOWQ92917 476 aaPredicted RBP eCLIP14.42□□□□□ -0.16e-7■■□□□ 11.4
PPP4R1-202ENST00000400555 ZCCHC17Q9NP64 241 aaKnown RBP14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 LMO7Q8WWI1 1683 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 CYP2D6P10635 497 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 MCM6Q14566 821 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 DDB1Q16531 1140 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 ZNF569Q5MCW4 686 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 MAP3K14Q99558 947 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 TAB2Q9NYJ8 693 aa14.42□□□□□ -0.1
PPP4R1-202ENST00000400555 IKBKBO14920 756 aa14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 EARS2Q5JPH6 523 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 NOL10Q9BSC4 688 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 RHOXF2BP0C7M4 288 aa14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 PTGDRQ13258 359 aa14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 BMS1Q14692 1282 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 RHOXF2Q9BQY4 288 aa14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 GTPBP4Q9BZE4 634 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 CCDC87Q9NVE4 849 aa14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 MCM9Q9NXL9 1143 aa14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 MARF1Q9Y4F3 1742 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 TFRCP02786 760 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 GYS2P54840 703 aa14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 CPVLQ9H3G5 476 aa14.41□□□□□ -0.1
PPP4R1-202ENST00000400555 LIFRP42702 1097 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 USP5P45974 858 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 CDC5LQ99459 802 aaKnown RBP14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 A0A0U1RQJ8 604 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 PSDA5PKW4 1024 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 ARHGAP6O43182 974 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 KCNQ2O43526 872 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 PIP4K2BP78356 416 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 PPP2R3AQ06190 1150 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 ATRIPQ8WXE1 791 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 MKNK2Q9HBH9 465 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 C5P01031 1676 aa14.4□□□□□ -0.1
PPP4R1-202ENST00000400555 AKR1B15C9JRZ8 316 aaPredicted RBP14.4□□□□□ -0.11
PPP4R1-202ENST00000400555 PTPREP23469 700 aa14.4□□□□□ -0.11
PPP4R1-202ENST00000400555 TMTC2Q8N394 836 aa14.4□□□□□ -0.11
PPP4R1-202ENST00000400555 MLKLQ8NB16 471 aa14.4□□□□□ -0.11
PPP4R1-202ENST00000400555 ANKRD20A12PQ8NF67 263 aa14.4□□□□□ -0.11
PPP4R1-202ENST00000400555 TIGD1Q96MW7 591 aa14.4□□□□□ -0.11
PPP4R1-202ENST00000400555 TUBE1Q9UJT0 475 aa14.4□□□□□ -0.11
PPP4R1-202ENST00000400555 FBXO2Q9UK22 296 aaPredicted RBP14.4□□□□□ -0.11
PPP4R1-202ENST00000400555 AFDNP55196 1824 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 TCRBV5S4A2TA0A5A2 114 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 PHACTR2O75167 634 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 RBL2Q08999 1139 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 ERFEQ4G0M1 354 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 TTC38Q5R3I4 469 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 DZIP1Q86YF9 867 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 ZSCAN10Q96SZ4 725 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 SLIT3O75094 1523 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 KIF5CO60282 957 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 VEGFAP15692 232 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 TSR1Q2NL82 804 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 ENAHQ8N8S7 591 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 SAP30BPQ9UHR5 308 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 SYNRGQ9UMZ2 1314 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 GOLGA8HP0CJ92 632 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 CASP14P31944 242 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 NKX1-1Q15270 411 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 SGMS1Q86VZ5 419 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 VGLL2Q8N8G2 317 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 ANKIB1Q9P2G1 1089 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 HPSEQ9Y251 543 aa14.39□□□□□ -0.11
PPP4R1-202ENST00000400555 LOC102724428A0A0B4J2F2 783 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 WNT7AO00755 349 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 GNAT2P19087 354 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 ARID4AP29374 1257 aaPredicted RBP14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 SIK1P57059 783 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 HEATR3Q7Z4Q2 680 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 GPR101Q96P66 508 aaPredicted RBP14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 PLA2G12BQ9BX93 195 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 CHD2O14647 1828 aaKnown RBP14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 CCDC175P0C221 793 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 KLRK1P26718 216 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 IL6STP40189 918 aaPredicted RBP14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 ACRBPQ8NEB7 543 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 SLF1Q9BQI6 1058 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 GUCA1BQ9UMX6 200 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 CAMTA1Q9Y6Y1 1673 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 HSD3B7Q9H2F3 369 aa14.38□□□□□ -0.11
PPP4R1-202ENST00000400555 INTS13Q9NVM9 706 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms