RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 KCNH4Q9UQ05 1017 aa21.05■□□□□ 0.96
CTNS-203ENST00000399306 PHIPQ8WWQ0 1821 aa21.04■□□□□ 0.96
CTNS-203ENST00000399306 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
CTNS-203ENST00000399306 CXCL11O14625 94 aa21.04■□□□□ 0.96
CTNS-203ENST00000399306 SLURP2P0DP57 97 aa21.04■□□□□ 0.96
CTNS-203ENST00000399306 CDK8P49336 464 aa21.04■□□□□ 0.96
CTNS-203ENST00000399306 PPARAQ07869 468 aa21.04■□□□□ 0.96
CTNS-203ENST00000399306 CYP2D7A0A087X1C5 515 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 TESPA1A2RU30 521 aaPredicted RBP21.03■□□□□ 0.96
CTNS-203ENST00000399306 USP17L5A8MUK1 530 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 TM4SF4P48230 202 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 GTF2A2P52657 109 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 MAP2K1Q02750 393 aaPredicted RBP21.03■□□□□ 0.96
CTNS-203ENST00000399306 PDE4BQ07343 736 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 SREBF2Q12772 1141 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 RRP1BQ14684 758 aaKnown RBP21.03■□□□□ 0.96
CTNS-203ENST00000399306 SLC4A8Q2Y0W8 1093 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 ESYT1Q9BSJ8 1104 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 WDR18Q9BV38 432 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 AS3MTQ9HBK9 375 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 CABP5Q9NP86 173 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 ZBTB21Q9ULJ3 1066 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 LAMA4Q16363 1823 aa21.03■□□□□ 0.96
CTNS-203ENST00000399306 FGRP09769 529 aa21.02■□□□□ 0.96
CTNS-203ENST00000399306 GJA5P36382 358 aa21.02■□□□□ 0.96
CTNS-203ENST00000399306 ABCB5Q2M3G0 1257 aa21.02■□□□□ 0.96
CTNS-203ENST00000399306 OTUD5Q96G74 571 aa21.02■□□□□ 0.96
CTNS-203ENST00000399306 IL25Q9H293 177 aa21.02■□□□□ 0.96
CTNS-203ENST00000399306 AFG3L2Q9Y4W6 797 aa21.02■□□□□ 0.96
CTNS-203ENST00000399306 KIF23Q02241 960 aaPredicted RBP21.01■□□□□ 0.95
CTNS-203ENST00000399306 SNAPC2Q13487 334 aa21.01■□□□□ 0.95
CTNS-203ENST00000399306 TMEM179Q6ZVK1 233 aa21.01■□□□□ 0.95
CTNS-203ENST00000399306 DYNLL2Q96FJ2 89 aa21.01■□□□□ 0.95
CTNS-203ENST00000399306 MKNK2Q9HBH9 465 aa21.01■□□□□ 0.95
CTNS-203ENST00000399306 PTPRFP10586 1907 aa21■□□□□ 0.95
CTNS-203ENST00000399306 IRF6O14896 467 aa21■□□□□ 0.95
CTNS-203ENST00000399306 AOC2O75106 756 aa21■□□□□ 0.95
CTNS-203ENST00000399306 EVX2Q03828 476 aa21■□□□□ 0.95
CTNS-203ENST00000399306 KIAA1211Q6ZU35 1233 aa21■□□□□ 0.95
CTNS-203ENST00000399306 SLC44A5Q8NCS7 719 aa21■□□□□ 0.95
CTNS-203ENST00000399306 MAP4K1Q92918 833 aa21■□□□□ 0.95
CTNS-203ENST00000399306 MS4A4AQ96JQ5 239 aa21■□□□□ 0.95
CTNS-203ENST00000399306 ZCCHC17Q9NP64 241 aaKnown RBP21■□□□□ 0.95
CTNS-203ENST00000399306 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21■□□□□ 0.95
CTNS-203ENST00000399306 ZHX2Q9Y6X8 837 aa21■□□□□ 0.95
CTNS-203ENST00000399306 U3KPZ7 1027 aaPredicted RBP21■□□□□ 0.95
CTNS-203ENST00000399306 GREB1LQ9C091 1923 aaPredicted RBP21■□□□□ 0.95
CTNS-203ENST00000399306 CA12O43570 354 aa20.99■□□□□ 0.95
CTNS-203ENST00000399306 ORC4O43929 436 aa20.99■□□□□ 0.95
CTNS-203ENST00000399306 GH2P01242 217 aa20.99■□□□□ 0.95
CTNS-203ENST00000399306 CETPP11597 493 aa20.99■□□□□ 0.95
CTNS-203ENST00000399306 GRM1Q13255 1194 aa20.99■□□□□ 0.95
CTNS-203ENST00000399306 ZNF280CQ8ND82 737 aa20.99■□□□□ 0.95
CTNS-203ENST00000399306 CNKSR2Q8WXI2 1034 aa20.99■□□□□ 0.95
CTNS-203ENST00000399306 RNF41Q9H4P4 317 aaPredicted RBP20.99■□□□□ 0.95
CTNS-203ENST00000399306 PLIN4Q96Q06 1357 aa20.98■□□□□ 0.95
CTNS-203ENST00000399306 ZNF213O14771 459 aa20.98■□□□□ 0.95
CTNS-203ENST00000399306 EPB41L2O43491 1005 aaKnown RBP20.98■□□□□ 0.95
CTNS-203ENST00000399306 GDF11O95390 407 aa20.98■□□□□ 0.95
CTNS-203ENST00000399306 RASA1P20936 1047 aa20.98■□□□□ 0.95
CTNS-203ENST00000399306 IMMTQ16891 758 aaKnown RBP20.98■□□□□ 0.95
CTNS-203ENST00000399306 ZNF444Q8N0Y2 327 aaPredicted RBP20.98■□□□□ 0.95
CTNS-203ENST00000399306 STAG1Q8WVM7 1258 aa20.98■□□□□ 0.95
CTNS-203ENST00000399306 A0A0G2JLL6 359 aaPredicted RBP20.97■□□□□ 0.95
CTNS-203ENST00000399306 C19orf81C9J6K1 198 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 SMIM22K7EJ46 135 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 ALDH1A1P00352 501 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 JAG1P78504 1218 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 SH3D19Q5HYK7 790 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 PPP4R3BQ5MIZ7 849 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 OTUD7BQ6GQQ9 843 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 FASTKD5Q7L8L6 764 aaKnown RBP20.97■□□□□ 0.95
CTNS-203ENST00000399306 PRRT2Q7Z6L0 340 aaPredicted RBP20.97■□□□□ 0.95
CTNS-203ENST00000399306 WBP1LQ9NX94 342 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 SAGE1Q9NXZ1 904 aa20.97■□□□□ 0.95
CTNS-203ENST00000399306 EIF5BO60841 1220 aaKnown RBP20.96■□□□□ 0.95
CTNS-203ENST00000399306 AKR1B1P15121 316 aa20.96■□□□□ 0.95
CTNS-203ENST00000399306 GUCY1A2P33402 732 aa20.96■□□□□ 0.95
CTNS-203ENST00000399306 AKNAD1Q5T1N1 836 aa20.96■□□□□ 0.95
CTNS-203ENST00000399306 ZIC5Q96T25 663 aa20.96■□□□□ 0.95
CTNS-203ENST00000399306 CFHR5Q9BXR6 569 aa20.96■□□□□ 0.95
CTNS-203ENST00000399306 LSG1Q9H089 658 aaKnown RBP20.96■□□□□ 0.95
CTNS-203ENST00000399306 KANSL2Q9H9L4 492 aa20.96■□□□□ 0.95
CTNS-203ENST00000399306 SYNPO2Q9UMS6 1093 aa20.96■□□□□ 0.95
CTNS-203ENST00000399306 USP17L10C9JJH3 530 aa20.95■□□□□ 0.94
CTNS-203ENST00000399306 PTH1RQ03431 593 aa20.95■□□□□ 0.94
CTNS-203ENST00000399306 PROCA1Q8NCQ7 364 aaPredicted RBP20.95■□□□□ 0.94
CTNS-203ENST00000399306 NEDD1Q8NHV4 660 aa20.95■□□□□ 0.94
CTNS-203ENST00000399306 SLC45A1Q9Y2W3 748 aa20.95■□□□□ 0.94
CTNS-203ENST00000399306 PCNTO95613 3336 aa20.95■□□□□ 0.94
CTNS-203ENST00000399306 CCL15-CCL14A0A0B4J2E2 113 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 USP14P54578 494 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 BACE1P56817 501 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 CTDSPL2Q05D32 466 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 MKRN3Q13064 507 aaKnown RBP20.94■□□□□ 0.94
CTNS-203ENST00000399306 SPP2Q13103 211 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 SEPT2Q15019 361 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 CCL15Q16663 113 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 MFSD6Q6ZSS7 791 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 IFNL1Q8IU54 200 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms