RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 PPARAQ07869 468 aa22.87■■□□□ 1.25
HOXA9-202ENST00000396345 STK11IPQ8N1F8 1099 aa22.87■■□□□ 1.25
HOXA9-202ENST00000396345 OTUD5Q96G74 571 aa22.87■■□□□ 1.25
HOXA9-202ENST00000396345 ESYT1Q9BSJ8 1104 aa22.87■■□□□ 1.25
HOXA9-202ENST00000396345 ROBO3Q96MS0 1386 aa22.87■■□□□ 1.25
HOXA9-202ENST00000396345 SLC3A2P08195 630 aaKnown RBP22.86■■□□□ 1.25
HOXA9-202ENST00000396345 PTPRAP18433 802 aa22.86■■□□□ 1.25
HOXA9-202ENST00000396345 MAP2K2P36507 400 aa22.86■■□□□ 1.25
HOXA9-202ENST00000396345 PPATQ06203 517 aa22.86■■□□□ 1.25
HOXA9-202ENST00000396345 GINM1Q9NU53 330 aa22.86■■□□□ 1.25
HOXA9-202ENST00000396345 MYH8P13535 1937 aa22.86■■□□□ 1.25
HOXA9-202ENST00000396345 ASNSP08243 561 aa22.85■■□□□ 1.25
HOXA9-202ENST00000396345 JAG1P78504 1218 aa22.85■■□□□ 1.25
HOXA9-202ENST00000396345 KIF23Q02241 960 aaPredicted RBP22.85■■□□□ 1.25
HOXA9-202ENST00000396345 PPIL2Q13356 520 aa22.85■■□□□ 1.25
HOXA9-202ENST00000396345 ABCB5Q2M3G0 1257 aa22.85■■□□□ 1.25
HOXA9-202ENST00000396345 ZIC5Q96T25 663 aa22.85■■□□□ 1.25
HOXA9-202ENST00000396345 CABP5Q9NP86 173 aa22.85■■□□□ 1.25
HOXA9-202ENST00000396345 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.85■■□□□ 1.25
HOXA9-202ENST00000396345 ZHX2Q9Y6X8 837 aa22.85■■□□□ 1.25
HOXA9-202ENST00000396345 PCNTO95613 3336 aa22.85■■□□□ 1.25
HOXA9-202ENST00000396345 GH2P01242 217 aa22.84■■□□□ 1.25
HOXA9-202ENST00000396345 CTDSPL2Q05D32 466 aa22.84■■□□□ 1.25
HOXA9-202ENST00000396345 SHROOM1Q2M3G4 852 aaPredicted RBP22.84■■□□□ 1.25
HOXA9-202ENST00000396345 KIAA1211Q6ZU35 1233 aa22.84■■□□□ 1.25
HOXA9-202ENST00000396345 MKNK2Q9HBH9 465 aa22.84■■□□□ 1.25
HOXA9-202ENST00000396345 ZNF287Q9HBT7 754 aa22.84■■□□□ 1.25
HOXA9-202ENST00000396345 CTNNA3Q9UI47 895 aa22.84■■□□□ 1.25
HOXA9-202ENST00000396345 ANAPC4Q9UJX5 808 aa22.84■■□□□ 1.25
HOXA9-202ENST00000396345 ZBTB21Q9ULJ3 1066 aa22.84■■□□□ 1.25
HOXA9-202ENST00000396345 USP17L5A8MUK1 530 aa22.83■■□□□ 1.25
HOXA9-202ENST00000396345 MPHOSPH10O00566 681 aaKnown RBP22.83■■□□□ 1.25
HOXA9-202ENST00000396345 PTH1RQ03431 593 aa22.83■■□□□ 1.25
HOXA9-202ENST00000396345 PDE4BQ07343 736 aa22.83■■□□□ 1.25
HOXA9-202ENST00000396345 CCDC84Q86UT8 332 aaPredicted RBP22.83■■□□□ 1.25
HOXA9-202ENST00000396345 CCDC17Q96LX7 622 aa22.83■■□□□ 1.25
HOXA9-202ENST00000396345 THSD7BQ9C0I4 1608 aa22.82■■□□□ 1.24
HOXA9-202ENST00000396345 IRF6O14896 467 aa22.82■■□□□ 1.24
HOXA9-202ENST00000396345 HAND2P61296 217 aa22.82■■□□□ 1.24
HOXA9-202ENST00000396345 PHIPQ8WWQ0 1821 aa22.81■■□□□ 1.24
HOXA9-202ENST00000396345 MANSC4A6NHS7 340 aaPredicted RBP22.81■■□□□ 1.24
HOXA9-202ENST00000396345 AKR1B1P15121 316 aa22.81■■□□□ 1.24
HOXA9-202ENST00000396345 GTF2A2P52657 109 aa22.81■■□□□ 1.24
HOXA9-202ENST00000396345 REM2Q8IYK8 340 aaPredicted RBP22.81■■□□□ 1.24
HOXA9-202ENST00000396345 TBC1D2Q9BYX2 928 aa22.81■■□□□ 1.24
HOXA9-202ENST00000396345 AFG3L2Q9Y4W6 797 aa22.81■■□□□ 1.24
HOXA9-202ENST00000396345 ZNF213O14771 459 aa22.8■■□□□ 1.24
HOXA9-202ENST00000396345 PRDM1O75626 825 aa22.8■■□□□ 1.24
HOXA9-202ENST00000396345 RASA1P20936 1047 aa22.8■■□□□ 1.24
HOXA9-202ENST00000396345 SREBF2Q12772 1141 aa22.8■■□□□ 1.24
HOXA9-202ENST00000396345 SNAPC2Q13487 334 aa22.8■■□□□ 1.24
HOXA9-202ENST00000396345 RAB3GAP1Q15042 981 aa22.8■■□□□ 1.24
HOXA9-202ENST00000396345 IMMTQ16891 758 aaKnown RBP22.8■■□□□ 1.24
HOXA9-202ENST00000396345 ZNF444Q8N0Y2 327 aaPredicted RBP22.8■■□□□ 1.24
HOXA9-202ENST00000396345 AS3MTQ9HBK9 375 aa22.8■■□□□ 1.24
HOXA9-202ENST00000396345 KCNH4Q9UQ05 1017 aa22.8■■□□□ 1.24
HOXA9-202ENST00000396345 U3KPZ7 1027 aaPredicted RBP22.8■■□□□ 1.24
HOXA9-202ENST00000396345 CXCL11O14625 94 aa22.79■■□□□ 1.24
HOXA9-202ENST00000396345 TMEM179Q6ZVK1 233 aa22.79■■□□□ 1.24
HOXA9-202ENST00000396345 ZNF280CQ8ND82 737 aa22.79■■□□□ 1.24
HOXA9-202ENST00000396345 MAP4K1Q92918 833 aa22.79■■□□□ 1.24
HOXA9-202ENST00000396345 MS4A4AQ96JQ5 239 aa22.79■■□□□ 1.24
HOXA9-202ENST00000396345 LSG1Q9H089 658 aaKnown RBP22.79■■□□□ 1.24
HOXA9-202ENST00000396345 ANO2Q9NQ90 1003 aa22.79■■□□□ 1.24
HOXA9-202ENST00000396345 INCENPQ9NQS7 918 aa22.79■■□□□ 1.24
HOXA9-202ENST00000396345 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.79■■□□□ 1.24
HOXA9-202ENST00000396345 LAMA4Q16363 1823 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 TRIM75PA6NK02 468 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 HSPA1AP0DMV8 641 aaKnown RBP22.78■■□□□ 1.24
HOXA9-202ENST00000396345 HSPA1BP0DMV9 641 aaKnown RBP22.78■■□□□ 1.24
HOXA9-202ENST00000396345 GUCY1A2P33402 732 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 TM4SF4P48230 202 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 INHBEP58166 350 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 SPP2Q13103 211 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 SEPT2Q15019 361 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 WDR18Q9BV38 432 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 NBPF3Q9H094 633 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 TACC3Q9Y6A5 838 aa22.78■■□□□ 1.24
HOXA9-202ENST00000396345 CCL15-CCL14A0A0B4J2E2 113 aa22.77■■□□□ 1.24
HOXA9-202ENST00000396345 FGRP09769 529 aa22.77■■□□□ 1.24
HOXA9-202ENST00000396345 CETPP11597 493 aa22.77■■□□□ 1.24
HOXA9-202ENST00000396345 MAP2K1Q02750 393 aaPredicted RBP22.77■■□□□ 1.24
HOXA9-202ENST00000396345 CCL15Q16663 113 aa22.77■■□□□ 1.24
HOXA9-202ENST00000396345 AKNAD1Q5T1N1 836 aa22.77■■□□□ 1.24
HOXA9-202ENST00000396345 TESPA1A2RU30 521 aaPredicted RBP22.76■■□□□ 1.23
HOXA9-202ENST00000396345 ORC4O43929 436 aa22.76■■□□□ 1.23
HOXA9-202ENST00000396345 COL13A1Q5TAT6 717 aaPredicted RBP22.76■■□□□ 1.23
HOXA9-202ENST00000396345 MFSD6Q6ZSS7 791 aa22.76■■□□□ 1.23
HOXA9-202ENST00000396345 TBC1D10CQ8IV04 446 aa22.76■■□□□ 1.23
HOXA9-202ENST00000396345 STAG1Q8WVM7 1258 aa22.76■■□□□ 1.23
HOXA9-202ENST00000396345 RNF41Q9H4P4 317 aaPredicted RBP22.76■■□□□ 1.23
HOXA9-202ENST00000396345 TOMM22Q9NS69 142 aa22.76■■□□□ 1.23
HOXA9-202ENST00000396345 RBM8AQ9Y5S9 174 aaKnown RBP22.76■■□□□ 1.23
HOXA9-202ENST00000396345 A0A0G2JLL6 359 aaPredicted RBP22.75■■□□□ 1.23
HOXA9-202ENST00000396345 TSPY3P0CV98 308 aa22.75■■□□□ 1.23
HOXA9-202ENST00000396345 TSPY8P0CW00 308 aa22.75■■□□□ 1.23
HOXA9-202ENST00000396345 PCP11498 1178 aaKnown RBP22.75■■□□□ 1.23
HOXA9-202ENST00000396345 FAM47AQ5JRC9 791 aa22.75■■□□□ 1.23
HOXA9-202ENST00000396345 PRRT2Q7Z6L0 340 aaPredicted RBP22.75■■□□□ 1.23
HOXA9-202ENST00000396345 BRI3BPQ8WY22 251 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms