RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 KIF4AO95239 1232 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 FAM157BP0CG42 384 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 JUNDP17535 347 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 GJA4P35212 333 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 GJA9P57773 515 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 TUBA3CQ13748 450 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 PRKD1Q15139 912 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 NFKBIBQ15653 356 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 IFI16Q16666 785 aaKnown RBP-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 SH3D19Q5HYK7 790 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 C20orf194Q5TEA3 1177 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 TUBA3EQ6PEY2 450 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 PAOXQ6QHF9 649 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 OLFML1Q6UWY5 402 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 VASH1Q7L8A9 365 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 PDPRQ8NCN5 879 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 Q8TCH9 128 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 CLIP3Q96DZ5 547 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 MEGF9Q9H1U4 602 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 NKX2-4Q9H2Z4 354 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 EBF3Q9H4W6 596 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 SRA1Q9HD15 236 aaKnown RBP-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 GJB4Q9NTQ9 266 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 NAGPAQ9UK23 515 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 PLAGL2Q9UPG8 496 aa-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 ZNF330Q9Y3S2 320 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 COL16A1Q07092 1604 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-1340P-201ENST00000384438 UBR4Q5T4S7 5183 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 SPATA31A6Q5VVP1 1343 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 PRRC2BQ5JSZ5 2229 aaKnown RBP-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 IGKV6-21A0A0C4DH24 114 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 SH3D21A4FU49 640 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 SPDYE4A6NLX3 237 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 IFITM10A6NMD0 228 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 TCP11X1B4DZS4 312 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 KHNYNO15037 678 aaKnown RBP-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 TP73O15350 636 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 SART1O43290 800 aaKnown RBP-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 LILRA1O75019 489 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 KRT5P13647 590 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 BRPF1P55201 1214 aaPredicted RBP-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 TMEM259Q4ZIN3 620 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 ACAD11Q709F0 780 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 IGDCC3Q8IVU1 814 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 TRMT44Q8IYL2 757 aaKnown RBP-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 ACRBPQ8NEB7 543 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 CDX2Q99626 313 aaPredicted RBP-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 CTRCQ99895 268 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 KRTAP2-1Q9BYU5 128 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 RNF32Q9H0A6 362 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 SP110Q9HB58 689 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 EVA1BQ9NVM1 165 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 PACSIN3Q9UKS6 424 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 SLC6A14Q9UN76 642 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 INVSQ9Y283 1065 aa-1.09□□□□□ -2.58
RNU6-1340P-201ENST00000384438 LRP2P98164 4655 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 TMEM265A0A087WTH1 108 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 HRKO00198 91 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 LINC01565O15544 149 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 HOXA3O43365 443 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 KRT13P13646 458 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 RBMXP38159 391 aaKnown RBP-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 HLCSP50747 726 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 POLGP54098 1239 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 RHDQ02161 417 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ERV3-1Q14264 604 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 GSE1Q14687 1217 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SLC1A5Q15758 541 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 MBNL2Q5VZF2 373 aaKnown RBP-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PLEKHA7Q6IQ23 1121 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 OGFOD3Q6PK18 319 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 NUTM1Q86Y26 1132 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 MAP4K3Q8IVH8 894 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 FAM181AQ8N9Y4 354 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 DCAF11Q8TEB1 546 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 MZB1Q8WU39 189 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 TTC9Q92623 222 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SLC30A3Q99726 388 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 PRDM14Q9GZV8 571 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SLC6A17Q9H1V8 727 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 TNKS2Q9H2K2 1166 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 MKNK2Q9HBH9 465 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 KCNK4Q9NYG8 393 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 TLR7Q9NYK1 1049 aaKnown RBP-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ADAMTS1Q9UHI8 967 aa-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 FNDC3AQ9Y2H6 1198 aaKnown RBP-1.1□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ZNF536O15090 1300 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CROCCQ5TZA2 2017 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 B4E1Z4 1266 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ADAM10O14672 748 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 MAP3K7O43318 606 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 SOCS5O75159 536 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 NFATC1O95644 943 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 C1RP00736 705 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ACRP10323 421 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 TCEA1P23193 301 aaKnown RBP-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 POLD1P28340 1107 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 RXRBP28702 533 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 CDR1P51861 262 aa-1.11□□□□□ -2.59
RNU6-1340P-201ENST00000384438 ERVFC1P60507 584 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms