RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 E7EWF7 191 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 DAPK3O43293 454 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 SPOPO43791 374 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 NOLC1Q14978 699 aaKnown RBP eCLIP15.22■□□□□ 0.03
GPC6-201ENST00000377047 NLGN1Q8N2Q7 840 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 EDC3Q96F86 508 aaKnown RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 LPXNO60711 386 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 CUTAO60888 179 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 ATP2A2P16615 1042 aaKnown RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 ATP5JP18859 108 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 CHRNDQ07001 517 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 MRPL44Q9H9J2 332 aaKnown RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.22■□□□□ 0.03
GPC6-201ENST00000377047 NPC1L1Q9UHC9 1359 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 KDM5AP29375 1690 aaKnown RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 AKR1B15C9JRZ8 316 aaPredicted RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 ALAS1P13196 640 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 CNGA1P29973 690 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 PPP2R5BQ15173 497 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 REXO1Q8N1G1 1221 aaKnown RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 IFT81Q8WYA0 676 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 STMN4Q9H169 189 aaPredicted RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 KIAA0232Q92628 1395 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 PPEF1O14829 653 aaPredicted RBP15.22■□□□□ 0.03
GPC6-201ENST00000377047 BTDP43251 543 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 ASIC2Q16515 512 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 FAM182BQ5T319 152 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 CABP7Q86V35 215 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 SELENOSQ9BQE4 189 aa15.22■□□□□ 0.03
GPC6-201ENST00000377047 NPHP4O75161 1426 aaPredicted RBP15.21■□□□□ 0.03
GPC6-201ENST00000377047 GTF2F1P35269 517 aaKnown RBP eCLIP15.21■□□□□ 0.03
GPC6-201ENST00000377047 SDR42E1Q8WUS8 393 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 MLXIPQ9HAP2 919 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.21■□□□□ 0.03
GPC6-201ENST00000377047 MAP3K15Q6ZN16 1313 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 VWA3BQ502W6 1294 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 LIN9Q5TKA1 542 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 ZMYM4Q5VZL5 1548 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 SYNRGQ9UMZ2 1314 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 SMCO2A6NFE2 343 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 CFAP58Q5T655 872 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 KRT40Q6A162 431 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 METTL13Q8N6R0 699 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 RFX1P22670 979 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 CERKLQ49MI3 558 aaPredicted RBP15.21■□□□□ 0.03
GPC6-201ENST00000377047 CCDC122Q5T0U0 273 aa15.21■□□□□ 0.03
GPC6-201ENST00000377047 NSRP1Q9H0G5 558 aaKnown RBP15.21■□□□□ 0.03
GPC6-201ENST00000377047 TSPOAP1O95153 1857 aa15.21■□□□□ 0.02
GPC6-201ENST00000377047 SNX16P57768 344 aa15.21■□□□□ 0.02
GPC6-201ENST00000377047 NELFCDQ8IXH7 590 aa15.21■□□□□ 0.02
GPC6-201ENST00000377047 DSCC1Q9BVC3 393 aa15.21■□□□□ 0.02
GPC6-201ENST00000377047 GAS7O60861 476 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 MCM6Q14566 821 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 LRRC47Q8N1G4 583 aaKnown RBP15.2■□□□□ 0.02
GPC6-201ENST00000377047 KIAA1524Q8TCG1 905 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 ASAP1Q9ULH1 1129 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 E7EVH7 732 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 PAK1Q13153 545 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 ARFGAP3Q9NP61 516 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 EXOC3O60645 756 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 PCCAP05165 728 aaPredicted RBP15.2■□□□□ 0.02
GPC6-201ENST00000377047 ERCC3P19447 782 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 GNPTABQ3T906 1256 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 NOX5Q96PH1 765 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 FAM196AQ6ZSG2 479 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 MIER3Q7Z3K6 550 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 TRPC6Q9Y210 931 aa15.2■□□□□ 0.02
GPC6-201ENST00000377047 DTNBO60941 627 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 PRPF6O94906 941 aaKnown RBP15.19■□□□□ 0.02
GPC6-201ENST00000377047 LRRC24Q50LG9 513 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 NCAPG2Q86XI2 1143 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 IGSF22Q8N9C0 903 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 ZSCAN10Q96SZ4 725 aaPredicted RBP15.19■□□□□ 0.02
GPC6-201ENST00000377047 OTUD6AQ7L8S5 288 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 PRIMPOLQ96LW4 560 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 MTRF1LQ9UGC7 380 aaKnown RBP15.19■□□□□ 0.02
GPC6-201ENST00000377047 FAM173BQ6P4H8 233 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 CMTR1Q8N1G2 835 aaKnown RBP15.19■□□□□ 0.02
GPC6-201ENST00000377047 BAG1Q99933 345 aaPredicted RBP15.19■□□□□ 0.02
GPC6-201ENST00000377047 RRP9O43818 475 aaKnown RBP15.19■□□□□ 0.02
GPC6-201ENST00000377047 ZNF654Q8IZM8 581 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 EFCAB6Q5THR3 1501 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 OPA1O60313 960 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 TNNC1P63316 161 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 CALCOCO2Q13137 446 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.02
GPC6-201ENST00000377047 IFNL3Q8IZI9 196 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 FAM204AQ9H8W3 233 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 ODF2LQ9ULJ1 636 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 ADGBQ8N7X0 1667 aa15.19■□□□□ 0.02
GPC6-201ENST00000377047 INSRP06213 1382 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 GREM2Q9H772 168 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.18■□□□□ 0.02
GPC6-201ENST00000377047 ZNF804BA4D1E1 1349 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 PPP1R21Q6ZMI0 780 aa15.18■□□□□ 0.02
GPC6-201ENST00000377047 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms