RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 CABP5Q9NP86 173 aa32.48■■■□□ 2.79
COMMD3-201ENST00000376836 SDSP20132 328 aa32.47■■■□□ 2.79
COMMD3-201ENST00000376836 TTC22Q5TAA0 569 aa32.47■■■□□ 2.79
COMMD3-201ENST00000376836 CTR9Q6PD62 1173 aa32.47■■■□□ 2.79
COMMD3-201ENST00000376836 PTPN18Q99952 460 aa32.47■■■□□ 2.79
COMMD3-201ENST00000376836 DOCK1Q14185 1865 aa32.46■■■□□ 2.79
COMMD3-201ENST00000376836 TRIM75PA6NK02 468 aa32.46■■■□□ 2.79
COMMD3-201ENST00000376836 TBC1D8O95759 1140 aa32.46■■■□□ 2.79
COMMD3-201ENST00000376836 GABPAQ06546 454 aa32.46■■■□□ 2.79
COMMD3-201ENST00000376836 FASTKD5Q7L8L6 764 aaKnown RBP32.46■■■□□ 2.79
COMMD3-201ENST00000376836 ZNF280CQ8ND82 737 aa32.46■■■□□ 2.79
COMMD3-201ENST00000376836 DIAPH3Q9NSV4 1193 aa32.46■■■□□ 2.79
COMMD3-201ENST00000376836 SIPA1L1O43166 1804 aa32.46■■■□□ 2.79
COMMD3-201ENST00000376836 MFAP1P55081 439 aaKnown RBP32.45■■■□□ 2.78
COMMD3-201ENST00000376836 ABCB5Q2M3G0 1257 aa32.45■■■□□ 2.78
COMMD3-201ENST00000376836 SBK1Q52WX2 424 aa32.45■■■□□ 2.78
COMMD3-201ENST00000376836 IFNL3Q8IZI9 196 aa32.45■■■□□ 2.78
COMMD3-201ENST00000376836 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.45■■■□□ 2.78
COMMD3-201ENST00000376836 ZBTB21Q9ULJ3 1066 aa32.45■■■□□ 2.78
COMMD3-201ENST00000376836 MINDY4BA8MYZ0 360 aa32.44■■■□□ 2.78
COMMD3-201ENST00000376836 SHMT1P34896 483 aa32.44■■■□□ 2.78
COMMD3-201ENST00000376836 NMIQ13287 307 aaPredicted RBP32.44■■■□□ 2.78
COMMD3-201ENST00000376836 FAM227BQ96M60 508 aa32.44■■■□□ 2.78
COMMD3-201ENST00000376836 ZCCHC17Q9NP64 241 aaKnown RBP32.44■■■□□ 2.78
COMMD3-201ENST00000376836 DDX60LQ5H9U9 1706 aaKnown RBP32.43■■■□□ 2.78
COMMD3-201ENST00000376836 CYP2D7A0A087X1C5 515 aa32.43■■■□□ 2.78
COMMD3-201ENST00000376836 GH2P01242 217 aa32.43■■■□□ 2.78
COMMD3-201ENST00000376836 SPP2Q13103 211 aa32.43■■■□□ 2.78
COMMD3-201ENST00000376836 CCDC129Q6ZRS4 1044 aa32.43■■■□□ 2.78
COMMD3-201ENST00000376836 CCDC84Q86UT8 332 aaPredicted RBP32.43■■■□□ 2.78
COMMD3-201ENST00000376836 CFHR5Q9BXR6 569 aa32.43■■■□□ 2.78
COMMD3-201ENST00000376836 NAPBQ9H115 298 aa32.43■■■□□ 2.78
COMMD3-201ENST00000376836 A0A0G2JLL6 359 aaPredicted RBP32.42■■■□□ 2.78
COMMD3-201ENST00000376836 ERICH6BQ5W0A0 696 aa32.42■■■□□ 2.78
COMMD3-201ENST00000376836 PRRT2Q7Z6L0 340 aaPredicted RBP32.42■■■□□ 2.78
COMMD3-201ENST00000376836 DYNLL2Q96FJ2 89 aa32.42■■■□□ 2.78
COMMD3-201ENST00000376836 LAMB1P07942 1786 aa32.41■■■□□ 2.78
COMMD3-201ENST00000376836 A0A0D9SFI3 127 aa32.41■■■□□ 2.78
COMMD3-201ENST00000376836 BTBD19C9JJ37 291 aa32.41■■■□□ 2.78
COMMD3-201ENST00000376836 MPHOSPH10O00566 681 aaKnown RBP32.41■■■□□ 2.78
COMMD3-201ENST00000376836 RAB3GAP1Q15042 981 aa32.41■■■□□ 2.78
COMMD3-201ENST00000376836 GADL1Q6ZQY3 521 aa32.41■■■□□ 2.78
COMMD3-201ENST00000376836 ANKRD23Q86SG2 305 aa32.41■■■□□ 2.78
COMMD3-201ENST00000376836 WDR18Q9BV38 432 aa32.41■■■□□ 2.78
COMMD3-201ENST00000376836 ZFYVE28Q9HCC9 887 aa32.41■■■□□ 2.78
COMMD3-201ENST00000376836 CDK8P49336 464 aa32.4■■■□□ 2.78
COMMD3-201ENST00000376836 EVX2Q03828 476 aa32.4■■■□□ 2.78
COMMD3-201ENST00000376836 TAF1CQ15572 869 aaPredicted RBP32.4■■■□□ 2.78
COMMD3-201ENST00000376836 C16orf86Q6ZW13 317 aa32.4■■■□□ 2.78
COMMD3-201ENST00000376836 FAM43AQ8N2R8 423 aa32.4■■■□□ 2.78
COMMD3-201ENST00000376836 ZNF287Q9HBT7 754 aa32.4■■■□□ 2.78
COMMD3-201ENST00000376836 EPB41L4AQ9HCS5 686 aaPredicted RBP32.4■■■□□ 2.78
COMMD3-201ENST00000376836 SLC3A2P08195 630 aaKnown RBP32.39■■■□□ 2.78
COMMD3-201ENST00000376836 JAG1P78504 1218 aa32.39■■■□□ 2.78
COMMD3-201ENST00000376836 CCDC17Q96LX7 622 aa32.39■■■□□ 2.78
COMMD3-201ENST00000376836 GSPT1P15170 499 aaKnown RBP32.38■■■□□ 2.77
COMMD3-201ENST00000376836 CWC27Q6UX04 472 aaKnown RBP32.38■■■□□ 2.77
COMMD3-201ENST00000376836 SLC44A5Q8NCS7 719 aa32.38■■■□□ 2.77
COMMD3-201ENST00000376836 MKNK2Q9HBH9 465 aa32.38■■■□□ 2.77
COMMD3-201ENST00000376836 CCDC171Q6TFL3 1326 aa32.37■■■□□ 2.77
COMMD3-201ENST00000376836 BAZ2AQ9UIF9 1905 aaKnown RBP32.37■■■□□ 2.77
COMMD3-201ENST00000376836 PDHXO00330 501 aa32.37■■■□□ 2.77
COMMD3-201ENST00000376836 CRHR2Q13324 411 aa32.37■■■□□ 2.77
COMMD3-201ENST00000376836 TMOD4Q9NZQ9 345 aa32.37■■■□□ 2.77
COMMD3-201ENST00000376836 C19orf81C9J6K1 198 aa32.36■■■□□ 2.77
COMMD3-201ENST00000376836 USP17L10C9JJH3 530 aa32.36■■■□□ 2.77
COMMD3-201ENST00000376836 GPR25O00155 361 aa32.36■■■□□ 2.77
COMMD3-201ENST00000376836 NOM1Q5C9Z4 860 aaKnown RBP32.36■■■□□ 2.77
COMMD3-201ENST00000376836 ATAD5Q96QE3 1844 aa32.36■■■□□ 2.77
COMMD3-201ENST00000376836 BACE1P56817 501 aa32.35■■■□□ 2.77
COMMD3-201ENST00000376836 SHROOM1Q2M3G4 852 aaPredicted RBP32.35■■■□□ 2.77
COMMD3-201ENST00000376836 TMEM179Q6ZVK1 233 aa32.35■■■□□ 2.77
COMMD3-201ENST00000376836 PROCA1Q8NCQ7 364 aaPredicted RBP32.35■■■□□ 2.77
COMMD3-201ENST00000376836 HMGCS2P54868 508 aa32.34■■■□□ 2.77
COMMD3-201ENST00000376836 MTMR2Q13614 643 aa32.34■■■□□ 2.77
COMMD3-201ENST00000376836 MOGSQ13724 837 aa32.34■■■□□ 2.77
COMMD3-201ENST00000376836 STK11IPQ8N1F8 1099 aa32.34■■■□□ 2.77
COMMD3-201ENST00000376836 FEZ1Q99689 392 aa32.34■■■□□ 2.77
COMMD3-201ENST00000376836 PDE4BQ07343 736 aa32.33■■■□□ 2.77
COMMD3-201ENST00000376836 PABPC4Q13310 644 aaKnown RBP eCLIP32.33■■■□□ 2.772e-13■□□□□ 8.7
COMMD3-201ENST00000376836 VPS53Q5VIR6 699 aa32.33■■■□□ 2.77
COMMD3-201ENST00000376836 RUFY2Q8WXA3 655 aa32.33■■■□□ 2.77
COMMD3-201ENST00000376836 SLC45A1Q9Y2W3 748 aa32.33■■■□□ 2.77
COMMD3-201ENST00000376836 FKTNO75072 461 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 SEPT2Q15019 361 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 ALX1Q15699 326 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 SH3D19Q5HYK7 790 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 GPAT2Q6NUI2 795 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 ZNF589Q86UQ0 364 aaPredicted RBP32.32■■■□□ 2.76
COMMD3-201ENST00000376836 TNS4Q8IZW8 715 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 PARK7Q99497 189 aaKnown RBP32.32■■■□□ 2.76
COMMD3-201ENST00000376836 R3HDMLQ9H3Y0 253 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 PPP4R2Q9NY27 417 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 AGTPBP1Q9UPW5 1226 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 ROBO3Q96MS0 1386 aa32.32■■■□□ 2.76
COMMD3-201ENST00000376836 SMIM22K7EJ46 135 aa32.31■■■□□ 2.76
COMMD3-201ENST00000376836 HSPD1P10809 573 aaKnown RBP32.31■■■□□ 2.76
COMMD3-201ENST00000376836 PPARAQ07869 468 aa32.31■■■□□ 2.76
COMMD3-201ENST00000376836 ZNF444Q8N0Y2 327 aaPredicted RBP32.31■■■□□ 2.76
COMMD3-201ENST00000376836 ZNF296Q8WUU4 475 aaPredicted RBP32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms