RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 MCM6Q14566 821 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TSGA10IPQ3SY00 556 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 ZNF622Q969S3 477 aaKnown RBP eCLIP20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 UFL1O94874 794 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 PLEKHA8P1O95397 391 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TNNI2P48788 182 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 DIXDC1Q155Q3 683 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 ZSCAN10Q96SZ4 725 aaPredicted RBP20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 GUCA1BQ9UMX6 200 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 ZNF569Q5MCW4 686 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 MRFAP1L1Q96HT8 127 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 GPCPD1Q9NPB8 672 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 UBXN1Q04323 297 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CCDC70Q6NSX1 233 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 REREQ9P2R6 1566 aa20.07■□□□□ 0.8
TRAF3IP1-201ENST00000373327 FMR1NBQ8N0W7 255 aaPredicted RBP20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 IQUBQ8NA54 791 aa20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 DYNLL2Q96FJ2 89 aa20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 FAM205CA6NFA0 338 aa20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 SPTY2D1Q68D10 685 aaPredicted RBP20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 VIRMAQ69YN4 1812 aaKnown RBP20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 RHOXF2BP0C7M4 288 aa20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TEX11Q8IYF3 940 aa20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 RHOXF2Q9BQY4 288 aa20.06■□□□□ 0.8
TRAF3IP1-201ENST00000373327 PTGDRQ13258 359 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TDRD12Q587J7 1177 aaKnown RBP20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CAPZA3Q96KX2 299 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 SAMSN1Q9NSI8 373 aaKnown RBP20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TMEM232C9JQI7 657 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 PRDX5P30044 214 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 DTHD1Q6ZMT9 781 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CELF1Q92879 486 aaKnown RBP20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 C3P01024 1663 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 A0A1W2PQ27 194 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 A0A1W2PQ64 194 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 A0A1W2PQD8 194 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 LDHCP07864 332 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 ARID5AQ03989 594 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 RAD51AP2Q09MP3 1159 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TCEAL9Q9UHQ7 104 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 USP17L8P0C7I0 530 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 GTF2F1P35269 517 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 AXDND1Q5T1B0 1012 aaPredicted RBP20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CNBD1Q8NA66 436 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 HINFPQ9BQA5 517 aa20.05■□□□□ 0.8
TRAF3IP1-201ENST00000373327 SYMPKQ92797 1274 aaKnown RBP20.04■□□□□ 0.8
TRAF3IP1-201ENST00000373327 ZNF287Q9HBT7 754 aa20.04■□□□□ 0.8
TRAF3IP1-201ENST00000373327 FBXO3Q9UK99 471 aa20.04■□□□□ 0.8
TRAF3IP1-201ENST00000373327 WTIPA6NIX2 430 aaPredicted RBP20.04■□□□□ 0.8
TRAF3IP1-201ENST00000373327 FKBP15Q5T1M5 1219 aa20.04■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CCDC43Q96MW1 224 aaKnown RBP20.04■□□□□ 0.8
TRAF3IP1-201ENST00000373327 PHACTR2O75167 634 aa20.04■□□□□ 0.8
TRAF3IP1-201ENST00000373327 ZNF76P36508 570 aa20.04■□□□□ 0.8
TRAF3IP1-201ENST00000373327 SYNRGQ9UMZ2 1314 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 COL15A1P39059 1388 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CACNA2D4Q7Z3S7 1137 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 UBR1Q8IWV7 1749 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 INF2Q27J81 1249 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 GSG1L2A8MUP6 293 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TXKP42681 527 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CASP7P55210 303 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 EVCP57679 992 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 LY9Q9HBG7 655 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 EXOC1Q9NV70 894 aa20.03■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CCDC175P0C221 793 aa20.02■□□□□ 0.8
TRAF3IP1-201ENST00000373327 USP49Q70CQ1 688 aa20.02■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TERF1P54274 439 aa20.02■□□□□ 0.8
TRAF3IP1-201ENST00000373327 CCDC181Q5TID7 509 aa20.02■□□□□ 0.8
TRAF3IP1-201ENST00000373327 TRAPPC3LQ5T215 181 aa20.02■□□□□ 0.8
TRAF3IP1-201ENST00000373327 BMP2KQ9NSY1 1161 aaPredicted RBP20.02■□□□□ 0.8
TRAF3IP1-201ENST00000373327 UBN2Q6ZU65 1347 aa20.02■□□□□ 0.8
TRAF3IP1-201ENST00000373327 AKR1B15C9JRZ8 316 aaPredicted RBP20.02■□□□□ 0.79
TRAF3IP1-201ENST00000373327 MYO1BO43795 1136 aa20.02■□□□□ 0.79
TRAF3IP1-201ENST00000373327 MMRN2Q9H8L6 949 aa20.02■□□□□ 0.79
TRAF3IP1-201ENST00000373327 NRXN3Q9Y4C0 1643 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 CALM1P0DP23 149 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 CALM2P0DP24 149 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 CALM3P0DP25 149 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 DYMQ7RTS9 669 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 CALML4Q96GE6 196 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 NYXQ9GZU5 481 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 JADE2Q9NQC1 790 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 CCNT1O60563 726 aaKnown RBP20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 GRIN1Q05586 938 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 SHC4Q6S5L8 630 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 SEPT11Q9NVA2 429 aaKnown RBP20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 MMP1P03956 469 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 CENPHQ9H3R5 247 aa20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 CTDP1Q9Y5B0 961 aaPredicted RBP20.01■□□□□ 0.79
TRAF3IP1-201ENST00000373327 SMIM22K7EJ46 135 aa20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 FMNL1O95466 1100 aaPredicted RBP20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 DHX40Q8IX18 779 aaKnown RBP20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 KRT222Q8N1A0 295 aa20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 SLC44A5Q8NCS7 719 aa20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 PNMA1Q8ND90 353 aa20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 DPF2Q92785 391 aa20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 KCNB2Q92953 911 aa20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 HPS5Q9UPZ3 1129 aa20■□□□□ 0.79
TRAF3IP1-201ENST00000373327 PRR29P0C7W0 189 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms