RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 STXBP5LQ9Y2K9 1186 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 PARP3Q9Y6F1 533 aa4.47□□□□□ -1.69
ECHDC1-205ENST00000368295 PPIP5K1Q6PFW1 1433 aa4.46□□□□□ -1.69
ECHDC1-205ENST00000368295 ABCC6O95255 1503 aa4.46□□□□□ -1.69
ECHDC1-205ENST00000368295 SLC35F4A4IF30 521 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 F11P03951 625 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 PAX3P23760 479 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 TXLNAP40222 546 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 HIF1AQ16665 826 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 RTN1Q16799 776 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 NOM1Q5C9Z4 860 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 ZMYM1Q5SVZ6 1142 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 SH3PXD2AQ5TCZ1 1133 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 PHLDB3Q6NSJ2 640 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 SCYL1Q96KG9 808 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 PRUNE2Q8WUY3 3088 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 CHD8Q9HCK8 2581 aa4.46□□□□□ -1.7
ECHDC1-205ENST00000368295 LBRQ14739 615 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 RNFT1Q5M7Z0 435 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 RNF187Q5TA31 235 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 AMOTL1Q8IY63 956 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 ALDH16A1Q8IZ83 802 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 PGBD3Q8N328 593 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 CCDC155Q8N6L0 562 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 MYO19Q96H55 970 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 CARD10Q9BWT7 1032 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 HCN4Q9Y3Q4 1203 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 ARID1BQ8NFD5 2236 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 SLIT3O75094 1523 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 LY75O60449 1722 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 HTTP42858 3142 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 KRT37O76014 449 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 ATP4AP20648 1035 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 FAM193AP78312 1265 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 CCDC144BQ3MJ40 725 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 C16orf46Q6P387 395 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 BICDL1Q6ZP65 573 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 FTSJ3Q8IY81 847 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 CCDC146Q8IYE0 955 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 ABTB2Q8N961 1025 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 GAS2L1Q99501 681 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 GNL3LQ9NVN8 582 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 GEMIN8Q9NWZ8 242 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 RNF186Q9NXI6 227 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 SWAP70Q9UH65 585 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 SYNGAP1Q96PV0 1343 aa4.45□□□□□ -1.7
ECHDC1-205ENST00000368295 MUC6Q6W4X9 2439 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 C5P01031 1676 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 ADGRF5Q8IZF2 1346 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 H7C1W4 665 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 ZRANB2O95218 330 aaKnown RBP eCLIP4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 SLC43A3Q8NBI5 491 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 FLAD1Q8NFF5 587 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 PIK3R5Q8WYR1 880 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 GMCL1Q96IK5 515 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 PRAM1Q96QH2 718 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 CRISPLD1Q9H336 500 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 PRO3102Q9H379 93 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 GPAMQ9HCL2 828 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 NEUROD4Q9HD90 331 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 CCDC87Q9NVE4 849 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 NLRP2Q9NX02 1062 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 MTMR10Q9NXD2 777 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 EGFL7Q9UHF1 273 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 GJA3Q9Y6H8 435 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 ZFHX4Q86UP3 3567 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 MYOM3Q5VTT5 1437 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 CACNA1BQ00975 2339 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 ABCC11Q96J66 1382 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 ANKRD33BA6NCL7 494 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 SOWAHDA6NJG2 315 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 WDHD1O75717 1129 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 ATP2B1P20020 1258 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 EPHX2P34913 555 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 BIRC2Q13490 618 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 ARSJQ5FYB0 599 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 EFHC2Q5JST6 749 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 SOGA3Q5TF21 947 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 LYPD4Q6UWN0 246 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 RIPOR1Q6ZS17 1223 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 SAPCD2Q86UD0 394 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 CXorf38Q8TB03 319 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 HELQQ8TDG4 1101 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 ANKIB1Q9P2G1 1089 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 SEPT3Q9UH03 358 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 KCNG1Q9UIX4 513 aa4.44□□□□□ -1.7
ECHDC1-205ENST00000368295 CCDC88AQ3V6T2 1871 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 SCN11AQ9UI33 1791 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 DAPK1P53355 1430 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 ANKARQ7Z5J8 1434 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 RNF123Q5XPI4 1314 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 CNTNAP5Q8WYK1 1306 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 ZNF541Q9H0D2 1346 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 A0A1W2PNR3 127 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 NRDCO43847 1150 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 COPB2P35606 906 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 RHBDL3P58872 404 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 NAA30Q147X3 362 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 C11orf91Q3C1V1 193 aa4.43□□□□□ -1.7
ECHDC1-205ENST00000368295 NLRP8Q86W28 1048 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms