RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 TMX1Q9H3N1 280 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.73□□□□□ -1.49
CKAP5-202ENST00000354558 TNNI1P19237 187 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 NFKBIAP25963 317 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 LIG4P49917 911 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 ADCY7P51828 1080 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 PTGDRQ13258 359 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 HLTFQ14527 1009 aaKnown RBP eCLIP5.73□□□□□ -1.49
CKAP5-202ENST00000354558 BBS5Q8N3I7 341 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 PRPF38AQ8NAV1 312 aaKnown RBP5.73□□□□□ -1.49
CKAP5-202ENST00000354558 ARMT1Q9H993 441 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 RASAL2Q9UJF2 1139 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 FRMPD2Q68DX3 1309 aaPredicted RBP5.73□□□□□ -1.49
CKAP5-202ENST00000354558 ADGRF5Q8IZF2 1346 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 USP17L3A6NCW0 530 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 USP17L4A6NCW7 530 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 GRM8O00222 908 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 PRPHP41219 470 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 BPIFB4P59827 614 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 NFX1Q12986 1120 aaKnown RBP5.73□□□□□ -1.49
CKAP5-202ENST00000354558 DSTYKQ6XUX3 929 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 USP17L1Q7RTZ2 530 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 SRGAP1Q7Z6B7 1085 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 THEM5Q8N1Q8 247 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 RNF217Q8TC41 542 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 TRIM56Q9BRZ2 755 aaKnown RBP5.73□□□□□ -1.49
CKAP5-202ENST00000354558 FAM8A1Q9UBU6 413 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 MSRAQ9UJ68 235 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 FARP1Q9Y4F1 1045 aaPredicted RBP5.73□□□□□ -1.49
CKAP5-202ENST00000354558 UBN2Q6ZU65 1347 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 A2MP01023 1474 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 URB2Q14146 1524 aaKnown RBP5.73□□□□□ -1.49
CKAP5-202ENST00000354558 PAFAH1B1P43034 410 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 RAPGEF1Q13905 1077 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 MYCT1Q8N699 235 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 GLT8D2Q9H1C3 349 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 ST7Q9NRC1 585 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 ATP6V0A2Q9Y487 856 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 ENTPD7Q9NQZ7 604 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 ANAPC5Q9UJX4 755 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 ATP11BQ9Y2G3 1177 aa5.73□□□□□ -1.49
CKAP5-202ENST00000354558 CCDC171Q6TFL3 1326 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 EFCAB5A4FU69 1503 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 ERCC5P28715 1186 aaPredicted RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 POLR2BP30876 1174 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 HOXC9P31274 260 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 SLC9C1Q4G0N8 1177 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 CAVIN1Q6NZI2 390 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 HAUS6Q7Z4H7 955 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 DNAJC10Q8IXB1 793 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 EXOC8Q8IYI6 725 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 FAM49AQ9H0Q0 323 aaPredicted RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 RPF1Q9H9Y2 349 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 FAM50BQ9Y247 325 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 HMGXB3Q12766 1538 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 GAS7O60861 476 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 MARK3P27448 753 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 ICA1Q05084 483 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 IRAK1BP1Q5VVH5 260 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 IP6K1Q92551 441 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 ELP3Q9H9T3 547 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 IL16Q14005 1332 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 NCOA1Q15788 1441 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 KRT81Q14533 505 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 DIXDC1Q155Q3 683 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 UAP1Q16222 522 aaPredicted RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 KSR2Q6VAB6 950 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 LEKR1Q6ZMV7 388 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 TPH2Q8IWU9 490 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 TNS4Q8IZW8 715 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 FBXO41Q8TF61 875 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 NEK1Q96PY6 1258 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 TRPC7Q9HCX4 862 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 ECHDC1Q9NTX5 307 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 PCDHB13Q9Y5F0 798 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 TMEM94Q12767 1356 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 MAP3K5Q99683 1374 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 NPHP4O75161 1426 aaPredicted RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 LRRIQ4A6NIV6 560 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 CLGNO14967 610 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 RPL13P26373 211 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 CASQ1P31415 396 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 BTDP43251 543 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 CRKLP46109 303 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 TNNC1P63316 161 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 XKR9Q5GH70 373 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 FERMT3Q86UX7 667 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 IPO4Q8TEX9 1081 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 ZNF341Q9BYN7 854 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 RPS8P62241 208 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 TFCP2Q12800 502 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 ACCSLQ4AC99 568 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 SPECC1Q5M775 1068 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 SCYL2Q6P3W7 929 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 NDUFAF2Q8N183 169 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 DNAJC7Q99615 494 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 NAA15Q9BXJ9 866 aaKnown RBP5.72□□□□□ -1.49
CKAP5-202ENST00000354558 PCDHB9Q9Y5E1 797 aa5.72□□□□□ -1.49
CKAP5-202ENST00000354558 POLA2Q14181 598 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms