RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 GSDMDP57764 484 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 PDE4BQ07343 736 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 FUT2Q10981 343 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 EARS2Q5JPH6 523 aaKnown RBP24.61■■□□□ 1.53
CCDC38-201ENST00000344280 USP49Q70CQ1 688 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 FBXO33Q7Z6M2 555 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 ZNF592Q92610 1267 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 NSUN4Q96CB9 384 aaKnown RBP24.61■■□□□ 1.53
CCDC38-201ENST00000344280 SCN7AQ01118 1682 aa24.61■■□□□ 1.53
CCDC38-201ENST00000344280 MTERF4Q7Z6M4 381 aaKnown RBP24.6■■□□□ 1.53
CCDC38-201ENST00000344280 BRIP1Q9BX63 1249 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 USP17L12C9JPN9 530 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 USP17L21D6R901 530 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 POLR2DO15514 142 aaKnown RBP24.6■■□□□ 1.53
CCDC38-201ENST00000344280 PRR29P0C7W0 189 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 TPM4P67936 248 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 MECOMQ03112 1051 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 PTPN21Q16825 1174 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 NYAP1Q6ZVC0 841 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 CCAR2Q8N163 923 aaKnown RBP24.6■■□□□ 1.53
CCDC38-201ENST00000344280 RNF26Q9BY78 433 aaPredicted RBP24.6■■□□□ 1.53
CCDC38-201ENST00000344280 JAG2Q9Y219 1238 aa24.6■■□□□ 1.53
CCDC38-201ENST00000344280 MYL5Q02045 173 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 GLIPR1L2Q4G1C9 344 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 SLC10A5Q5PT55 438 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 IFIT1BQ5T764 474 aaKnown RBP24.59■■□□□ 1.53
CCDC38-201ENST00000344280 CEP135Q66GS9 1140 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 SLC51AQ86UW1 340 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 GRAMD1CQ8IYS0 662 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 MYH6P13533 1939 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 NMT2O60551 498 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 RPS8P62241 208 aaKnown RBP24.59■■□□□ 1.53
CCDC38-201ENST00000344280 AMIGO3Q86WK7 504 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 AATFQ9NY61 560 aaKnown RBP eCLIP24.59■■□□□ 1.53
CCDC38-201ENST00000344280 SERTAD1Q9UHV2 236 aa24.59■■□□□ 1.53
CCDC38-201ENST00000344280 PRDX5P30044 214 aa24.58■■□□□ 1.53
CCDC38-201ENST00000344280 PIP4K2BP78356 416 aa24.58■■□□□ 1.53
CCDC38-201ENST00000344280 TROAPQ12815 778 aa24.58■■□□□ 1.53
CCDC38-201ENST00000344280 PDILTQ8N807 584 aa24.58■■□□□ 1.53
CCDC38-201ENST00000344280 V9GY48 417 aaPredicted RBP24.58■■□□□ 1.53
CCDC38-201ENST00000344280 TXNRD3Q86VQ6 643 aa24.58■■□□□ 1.52
CCDC38-201ENST00000344280 FANCLQ9NW38 375 aa24.58■■□□□ 1.52
CCDC38-201ENST00000344280 CNTNAP4Q9C0A0 1308 aa24.57■■□□□ 1.52
CCDC38-201ENST00000344280 WNT7AO00755 349 aa24.57■■□□□ 1.52
CCDC38-201ENST00000344280 FGRP09769 529 aa24.57■■□□□ 1.52
CCDC38-201ENST00000344280 E4F1Q66K89 784 aaPredicted RBP24.57■■□□□ 1.52
CCDC38-201ENST00000344280 BCL11BQ9C0K0 894 aaPredicted RBP24.57■■□□□ 1.52
CCDC38-201ENST00000344280 BAZ2BQ9UIF8 2168 aaKnown RBP24.57■■□□□ 1.52
CCDC38-201ENST00000344280 POSTNQ15063 836 aa24.56■■□□□ 1.52
CCDC38-201ENST00000344280 PTPN14Q15678 1187 aa24.56■■□□□ 1.52
CCDC38-201ENST00000344280 ZNF827Q17R98 1081 aa24.56■■□□□ 1.52
CCDC38-201ENST00000344280 HSP90AA4PQ58FG1 418 aa24.56■■□□□ 1.52
CCDC38-201ENST00000344280 NOM1Q5C9Z4 860 aaKnown RBP24.56■■□□□ 1.52
CCDC38-201ENST00000344280 CSRNP2Q9H175 543 aa24.56■■□□□ 1.52
CCDC38-201ENST00000344280 SRPRBQ9Y5M8 271 aaKnown RBP24.56■■□□□ 1.52
CCDC38-201ENST00000344280 AKAP17AQ02040 695 aaKnown RBP24.56■■□□□ 1.52
CCDC38-201ENST00000344280 NAA30Q147X3 362 aaPredicted RBP24.56■■□□□ 1.52
CCDC38-201ENST00000344280 CATIPQ7Z7H3 387 aa24.56■■□□□ 1.52
CCDC38-201ENST00000344280 NBPF5PQ86XG9 351 aaPredicted RBP24.56■■□□□ 1.52
CCDC38-201ENST00000344280 MAN1B1Q9UKM7 699 aa24.56■■□□□ 1.52
CCDC38-201ENST00000344280 PAXBP1Q9Y5B6 917 aa24.56■■□□□ 1.52
CCDC38-201ENST00000344280 MYH13Q9UKX3 1938 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 CYP2D6P10635 497 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 UBASH3AP57075 661 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 FAM47AQ5JRC9 791 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 OLFM4Q6UX06 510 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 NLRP3Q96P20 1036 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 SETDB2Q96T68 719 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 PHF20Q9BVI0 1012 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 DCP1AQ9NPI6 582 aaPredicted RBP24.55■■□□□ 1.52
CCDC38-201ENST00000344280 LTBP4Q8N2S1 1624 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 SFPQP23246 707 aaKnown RBP eCLIP24.55■■□□□ 1.52
CCDC38-201ENST00000344280 IQCA1Q86XH1 822 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 NARFQ9UHQ1 456 aa24.55■■□□□ 1.52
CCDC38-201ENST00000344280 SERPINC1P01008 464 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 HIBADHP31937 336 aaKnown RBP24.54■■□□□ 1.52
CCDC38-201ENST00000344280 SLC4A8Q2Y0W8 1093 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 CCDC150Q8NCX0 1101 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 CCDC112Q8NEF3 446 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 ANKRD7Q92527 254 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.54■■□□□ 1.52
CCDC38-201ENST00000344280 TMEM232C9JQI7 657 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 GNPATO15228 680 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 PRPF3O43395 683 aaKnown RBP24.54■■□□□ 1.52
CCDC38-201ENST00000344280 ACTN4O43707 911 aaKnown RBP24.54■■□□□ 1.52
CCDC38-201ENST00000344280 NCBP1Q09161 790 aaKnown RBP24.54■■□□□ 1.52
CCDC38-201ENST00000344280 PPP2R5BQ15173 497 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 FAM182BQ5T319 152 aa24.54■■□□□ 1.52
CCDC38-201ENST00000344280 FMR1Q06787 632 aaKnown RBP eCLIP24.53■■□□□ 1.52
CCDC38-201ENST00000344280 ZNF579Q8NAF0 562 aaKnown RBP24.53■■□□□ 1.52
CCDC38-201ENST00000344280 KCND1Q9NSA2 647 aa24.53■■□□□ 1.52
CCDC38-201ENST00000344280 A0A087X0B3 334 aa24.52■■□□□ 1.52
CCDC38-201ENST00000344280 GOLGA8FQ08AF8 430 aa24.52■■□□□ 1.52
CCDC38-201ENST00000344280 GOLGA8DPQ0D2H9 430 aa24.52■■□□□ 1.52
CCDC38-201ENST00000344280 NPY5RQ15761 445 aa24.52■■□□□ 1.52
CCDC38-201ENST00000344280 CFAP100Q494V2 611 aa24.52■■□□□ 1.52
CCDC38-201ENST00000344280 ELOA2Q8IYF1 753 aaPredicted RBP24.52■■□□□ 1.52
CCDC38-201ENST00000344280 SEMA3EO15041 775 aa24.52■■□□□ 1.52
CCDC38-201ENST00000344280 KRT2P35908 639 aa24.52■■□□□ 1.52
CCDC38-201ENST00000344280 SARSP49591 514 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms