RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 TMOD3Q9NYL9 352 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 TRIM10Q9UDY6 481 aa18.37■□□□□ 0.53
SCARB1-202ENST00000339570 JAKMIP3Q5VZ66 844 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 NUTM2AQ8IVF1 878 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-202ENST00000339570 RASSF8Q8NHQ8 419 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 CAPZA3Q96KX2 299 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 STRBPQ96SI9 672 aaKnown RBP18.36■□□□□ 0.53
SCARB1-202ENST00000339570 FBXO2Q9UK22 296 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-202ENST00000339570 MMP1P03956 469 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 TNNT3P45378 269 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-202ENST00000339570 BCAMP50895 628 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 PNKPQ96T60 521 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 UBAC1Q9BSL1 405 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 LCMT1Q9UIC8 334 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 WTIPA6NIX2 430 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-202ENST00000339570 STX10O60499 249 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 NCAPH2Q6IBW4 605 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 GPR161Q8N6U8 529 aaKnown RBP18.36■□□□□ 0.53
SCARB1-202ENST00000339570 SRRTQ9BXP5 876 aaKnown RBP18.36■□□□□ 0.53
SCARB1-202ENST00000339570 GUCA1BQ9UMX6 200 aa18.36■□□□□ 0.53
SCARB1-202ENST00000339570 ERCC3P19447 782 aa18.35■□□□□ 0.53
SCARB1-202ENST00000339570 JAG2Q9Y219 1238 aa18.35■□□□□ 0.53
SCARB1-202ENST00000339570 V9GY48 417 aaPredicted RBP18.35■□□□□ 0.53
SCARB1-202ENST00000339570 ABCC6O95255 1503 aa18.35■□□□□ 0.53
SCARB1-202ENST00000339570 N4BP3O15049 544 aa18.35■□□□□ 0.53
SCARB1-202ENST00000339570 FXR1P51114 621 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCARB1-202ENST00000339570 MRPS25P82663 173 aaKnown RBP18.35■□□□□ 0.53
SCARB1-202ENST00000339570 ZSCAN26Q16670 478 aa18.35■□□□□ 0.53
SCARB1-202ENST00000339570 KIFC2Q96AC6 838 aa18.35■□□□□ 0.53
SCARB1-202ENST00000339570 KCND1Q9NSA2 647 aa18.35■□□□□ 0.53
SCARB1-202ENST00000339570 SYNRGQ9UMZ2 1314 aa18.35■□□□□ 0.53
SCARB1-202ENST00000339570 PPARDQ03181 441 aa18.34■□□□□ 0.53
SCARB1-202ENST00000339570 GPS2Q13227 327 aa18.34■□□□□ 0.53
SCARB1-202ENST00000339570 SYMPKQ92797 1274 aaKnown RBP18.34■□□□□ 0.53
SCARB1-202ENST00000339570 ADAM21Q9UKJ8 722 aa18.34■□□□□ 0.53
SCARB1-202ENST00000339570 RIPOR2Q9Y4F9 1068 aa18.34■□□□□ 0.53
SCARB1-202ENST00000339570 MDM2Q00987 491 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-202ENST00000339570 RASGRF1Q13972 1273 aa18.34■□□□□ 0.53
SCARB1-202ENST00000339570 RRAGBQ5VZM2 374 aa18.34■□□□□ 0.53
SCARB1-202ENST00000339570 FUT8Q9BYC5 575 aa18.34■□□□□ 0.53
SCARB1-202ENST00000339570 ABCB6Q9NP58 842 aa18.34■□□□□ 0.53
SCARB1-202ENST00000339570 SART3Q15020 963 aaKnown RBP18.33■□□□□ 0.53
SCARB1-202ENST00000339570 TMEM87BQ96K49 555 aa18.33■□□□□ 0.53
SCARB1-202ENST00000339570 MYH15Q9Y2K3 1946 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 EVX2Q03828 476 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 AKNAD1Q5T1N1 836 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 SPATA5Q8NB90 893 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 RNF225M0QZC1 329 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-202ENST00000339570 PDE8BO95263 885 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 FMNL1O95466 1100 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-202ENST00000339570 PTPREP23469 700 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 TXLNAP40222 546 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-202ENST00000339570 MLKLQ8NB16 471 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 ISCA1Q9BUE6 129 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 HDAC6Q9UBN7 1215 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 FAN1Q9Y2M0 1017 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 ADGRG1Q9Y653 693 aa18.33■□□□□ 0.52
SCARB1-202ENST00000339570 SRGAP2O75044 1071 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 PLEKHA8P1O95397 391 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 MCM7P33993 719 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 MAP3K12Q12852 859 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 FOXR1Q6PIV2 292 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 DACH1Q9UI36 760 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 CTSWP56202 376 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 DPYDQ12882 1025 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 TBX2Q13207 712 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-202ENST00000339570 MORC3Q14149 939 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 ZNF654Q8IZM8 581 aa18.32■□□□□ 0.52
SCARB1-202ENST00000339570 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 DHX8Q14562 1220 aaKnown RBP18.31■□□□□ 0.52
SCARB1-202ENST00000339570 CERS3Q8IU89 383 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 GSPT2Q8IYD1 628 aaKnown RBP18.31■□□□□ 0.52
SCARB1-202ENST00000339570 TRIM75PA6NK02 468 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 ACTN4O43707 911 aaKnown RBP18.31■□□□□ 0.52
SCARB1-202ENST00000339570 TPM1P09493 284 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 ENOX1Q8TC92 643 aaKnown RBP18.31■□□□□ 0.52
SCARB1-202ENST00000339570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCARB1-202ENST00000339570 GSG1L2A8MUP6 293 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 PATL2C9JE40 543 aaKnown RBP18.31■□□□□ 0.52
SCARB1-202ENST00000339570 PCCAP05165 728 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-202ENST00000339570 ZNF18P17022 549 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 KCNJ6P48051 423 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 PLCD1P51178 756 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 NR1I3Q14994 352 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 FILIP1LQ4L180 1135 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 RILPL1Q5EBL4 403 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 FANCBQ8NB91 859 aa18.31■□□□□ 0.52
SCARB1-202ENST00000339570 NOA1Q8NC60 698 aaKnown RBP18.31■□□□□ 0.52
SCARB1-202ENST00000339570 VSNL1P62760 191 aa18.3■□□□□ 0.52
SCARB1-202ENST00000339570 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
SCARB1-202ENST00000339570 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
SCARB1-202ENST00000339570 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.3■□□□□ 0.52
SCARB1-202ENST00000339570 CTAGE9A4FU28 777 aa18.3■□□□□ 0.52
SCARB1-202ENST00000339570 NMT2O60551 498 aa18.3■□□□□ 0.52
SCARB1-202ENST00000339570 CYP7A1P22680 504 aa18.3■□□□□ 0.52
SCARB1-202ENST00000339570 CRACR2BQ8N4Y2 399 aaPredicted RBP18.3■□□□□ 0.52
SCARB1-202ENST00000339570 RABGGTAQ92696 567 aa18.3■□□□□ 0.52
SCARB1-202ENST00000339570 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
SCARB1-202ENST00000339570 NWD2Q9ULI1 1742 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms